HMM Summary Page: TIGR03292

Functionphosphonate C-P lyase system protein PhnH
Gene SymbolphnH
Trusted Cutoff91.50
Domain Trusted Cutoff91.50
Noise Cutoff58.65
Domain Noise Cutoff58.65
Isology Typeequivalog
HMM Length184
AuthorSelengut J
Entry DateJan 25 2007 1:23PM
Last ModifiedFeb 14 2011 3:27PM
CommentPhnH is a component of the C-P lyase system (GenProp0232) for the catabolism of phosphonate compounds. The specific function of this component is unknown. This model is based on Pfam model PF05845.2, and has been broadened to include sequences missed by that model which are clearly true positive hits based on genome context.
ReferencesRN [1] RM 2155230 RT Molecular biology of carbon-phosphorus bond cleavage. RT Cloning and sequencing of the phn (psiD) genes involved in RT alkylphosphonate uptake and C-P lyase activity in RT Escherichia coli B. RA Chen CM, Ye QZ, Zhu ZM, Wanner BL, Walsh CT; RL J Biol Chem 1990;265:4461-4471. RN [2] RM 1840580 RT Molecular analysis of the cryptic and functional phn RT operons for phosphonate use in Escherichia coli K-12. RA Makino K, Kim SK, Shinagawa H, Amemura M, Nakata A; RL J Bacteriol 1991;173:2612-2665. DR INTERPRO; IPR008772;
Genome PropertyGenProp0232: phosphonates C-P lyase system (HMM)