| Accession | TIGR02388 |
| Name | rpoC2_cyan |
| Function | DNA-directed RNA polymerase, beta'' subunit |
| Trusted Cutoff | 467.40 |
| Domain Trusted Cutoff | 467.40 |
| Noise Cutoff | 461.75 |
| Domain Noise Cutoff | 461.75 |
| Isology Type | equivalog |
| EC Number | 2.7.7.6 |
| HMM Length | 1230 |
| Mainrole Category | Transcription |
| Subrole Category | DNA-dependent RNA polymerase |
| Author | Haft DH |
| Entry Date | Dec 1 2004 1:50PM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | The family consists of the product of the rpoC2 gene, a subunit of DNA-directed RNA polymerase of cyanobacteria and chloroplasts. RpoC2 corresponds largely to the C-terminal region of the RpoC (the beta' subunit) of other bacteria. Members of this family are designated beta'' in chloroplasts/plastids, and beta' (confusingly) in Cyanobacteria, where RpoC1 is called beta' in chloroplasts/plastids and gamma in Cyanobacteria. We prefer to name this family beta'', after its organellar members, to emphasize that this RpoC1 and RpoC2 together replace RpoC in other bacteria. |
| References | RM 2495268
RT Cyanobacterial RNA polymerase genes rpoC1 and rpoC2 correspond to rpoC of Escherichia coli.
RA Xie WQ, Jager K, Potts M.
RL J Bacteriol. 1989 Apr;171(4):1967-73.
DR HAMAP; MF_01324; 145 of 150 |
| Genome Property | GenProp0262: RNA polymerase, bacterial (HMM) |
