HMM Summary Page: TIGR01817
Accession | TIGR01817 |
Name | nifA |
Function | Nif-specific regulatory protein |
Gene Symbol | nifA |
Trusted Cutoff | 528.85 |
Domain Trusted Cutoff | 528.85 |
Noise Cutoff | 421.00 |
Domain Noise Cutoff | 421.00 |
Isology Type | equivalog |
HMM Length | 534 |
Mainrole Category | Central intermediary metabolism |
Subrole Category | Nitrogen fixation |
Author | Haft DH |
Entry Date | Feb 13 2003 10:29AM |
Last Modified | Feb 14 2011 3:27PM |
Comment | This HMM represents NifA, a DNA-binding regulatory protein for nitrogen fixation. The model produces scores between the trusted and noise cutoffs for a well-described NifA homolog in Aquifex aeolicus (which lacks nitrogenase), for transcriptional activators of alternative nitrogenases (VFe or FeFe instead of MoFe), and truncated forms. |
Genome Property | GenProp0029: nitrogen fixation (HMM) |