HMM Seed Alignment: TIGR01817
Download Alignment>SP|Q53206|NIFA_RHISN/51-594
DLGCSGLYRISKVLITSASLEIKLANVINTLPALLPMRRGAIVVVGAEGEPETTATFGVEPPSSG......ARHIAAKAA
IDRIVAKGAPLVVPDTCKSELFQDELQSIVSGTG..QVTFIGVPMK.ADQETLGTLWIDRAKDGAATRTQFEEEVRFLSM
VANLAARAVRLNGHES.RDSRPIGEEGDRKISGGDKE...LPEPTRQRPTRIDWIVGESPALRQVVESVKVVAQTNSAVL
LRGESGTGKEFFAKAIHELSPRRKKPFVKLNCAALSAGVLESELFGHEKGAFTGAISQRAGRFELADGGTLLLDEIGEIS
PAFQAKLLRVLQEGELERVGGTKTLKVDVRLICATNKDLETAVAEGEFRADLYYRINVVPLFLPPLRERNGDIPRLAKVF
LDRFNRENNRN.LEFTPAALEILSRCKFPGNVRELENCVRRTATLARSATIVPSDFSCQNDQCFSSMLGKT.........
.ADRPLGSHSLNGLAMSKRLP..VESPASLGYPAGPGGLT......VAPHLSDRELLISAMEKAGWVQAKAARILGLTPR
QVGYALRRHHIQVKKI
>SP|P03028|NIFA_RHIME/5-541
DKRSAEIYSISKALMAPTRLETTLNNFVNTLSLILRMRRGGLEIPASEGETKITAATRNSGSPSA......ADYTVPKAA
IDQVMTAGR.LVVPDVCNSELFKDQIK..WRGIG..PTAFIAAAVE.VDHETGGMLWFECAEE...SDYDYEEEVHFLSM
AANLAGRAIRLHRTIS.RRERTFAEEQQEQQNSRDEQ...SQSSARQRLLKNDGIIGESTALMTAVDTAKVMAETNSIVL
LRGETGTGKECFAKLIHQHSTRQKKPFIKFNCPALSESLLESELFGHEKGAFTGAIAQRVGRFESANGGTLLLDEIGEIP
PAFQAKLLRVIQEGEFERVGGTKTLKVDVRLIFATNKDLEMAVQNGEFREDLYYRISGVPLILPPLRHRDGDIPLLARAF
LQRFNEENGRD.LHFAPSALDHLSKCKFPGNVRELENCVRRTATLARSKTITSSDFACQTDQCFSSRLWKG.........
.VHCSHGHIEIDAPAGTTPL...LGAPANDVPPKEPGSAG......VASNLIERDRLISALEEAGWNQAKAARILEKTPR
QVGYALRRHGVDVRKL
>SP|P05407|NIFA_BRAJA/28-582
ESALAGIYEISKILNAPGRLEVTLANVLGLLQSFVQMRHGLVSLFNDDGVPELTVGAGWSEGTDER.....YRTCVPQKA
IHEIVATGRSLMVENVAAETAFSAADREVLGASDSIPVAFIGVPIR.VDSTVVGTLTIDRIPEGS.SSL.LEYDARLLAM
VANVIGQTIKLHRLFAGDREQSLVDKDRLEKQTVDR....GPPARERNELQAHGIIGDSPALSALLEKIVVVARSNSTVL
LRGESGTGKELVAKAIHESSVRAKRPFVKLNCAALPETVLESELFGHEKGAFTGAVSARKGRFELADKGTLFLDEIGEIS
PPFQAKLLRVLQEQEFERVGSNHTIKVDVRVIAATNRNLEEAVARSEFRADLYYRISVVPLLLPPLRERRSDIPLLAREF
LRKFNSENGRS.LTLEASAIDVLMSCKFPGNVRELENCIERTATLSAGTSIVRSDFACSQGQCLSTTLWKSTSYGKTDPA
APMQPVPAKSIIPLAETAPPPQAVCEPGSLAPSGTVLVSG........ARMADRERVVAAMEKSGWVQAKAARLLGLTPR
QVGYALRKYGIEIKRF
>SP|P09133|NIFA_AZOCA/50-615
EVALIGVYEISKILTAPRRLEVTLANVVNVLSSMLQMRHGMICILDSEGDPDMVATTGWTPEMAGQ.....IRAHVPQKA
IDQIVATQMPLVVQDVTADPLF.AGHEDLFGPPEEATVSFIGVPIK.ADHHVMGTLSIDRIWDGT.ARFRFDEDVRFLTM
VANLVGQTVRLHKLVASDRDRLIAQTHRLEKALREEKSGAEPEVAEAANGSAMGIVGDSPLVKRLIATAQVVARSNSTVL
LRGESGTGKELFARAIHELSPRKGKPFVKVNCAALPESVLESELFGHEKGAFTGALNMRQGRFELAHGGTLFLDEIGEIT
PAFQAKLLRVLQEGEFERVGGNRTLKVDVRLVCATNKNLEEAVSKGEFRADLYYRIHVVPLILPPLRERPGDIPKLAKNF
LDRFNKENKLH.MMLSAPAIDVLRRCYFPGNVRELENCIRRTATLAHDAVITPHDFACDSGQCLSAMLWKGSAPKPVMPH
VPPAPTPLTPLSPAPLATAAP.AAASPAPAADSLPVTCPGTEACPAVPPRQSEKEQLLQAMERSGWVQAKAARLLNLTPR
QVGYALRKYDIDIKRF
>SP|P27713|NIFA_HERSE/11-542
NLELVTIYEISKILGSSLDLSKTLREVLNVLSAHLETKRVLLSLMQDSGELQLVSAIGLSYEEFQS.....GRYRVGEGI
TGKIFQTETPIVVRDLAQEPLFLARTSPRQSQDGE.VISFVGVPIK.AAREMLGVLCVFRDGQSP.SRS.VDHEVRLLTM
VANLIGQTVRLYRSVAAERQQLQEEKRQLSRQLQGK.............YKLDNVIGISKAMQEVFAQVHQSAPSRSTML
LRGESGTGKEVIARAIHYLSPRKDGPFIKVNCAALSETLLESELFGHEKGAFTGAQGERKGRFELAHGGTLFLDEIGEIS
PAFQAKLLRVLQEREFERVGGSRSIKVDVRLVTATNRDLEKAVAKGEFRADLYYRINVVSIFIPPLRERREDIPYLVEHF
LEKFRVENQRAMVAMSPQAMKVMMNCYWPGNVRELENCVERTATMMRGDLITEVHFSCQQNKCLTKVLHEP.........
...GQQQPVVVVPLERISAP....YGAIFAEWDGQGQATG......AAPPTSERERLIWAMEQCGWVQAKAARALNISPR
QMGYALQKFNIEVKKF
>SP|P03027|NIFA_KLEPN/17-524
SQQFTAMQRISVVLSRATEASKTLQEVLSVLHNDAFMQHGMICLYDSQQEILSIEALQQTEDQTLP.GSTQIRYRPGEGL
VGTVLAQGQSLVLPRVADDQRFLDRLS..LYDYD...LPFIAVPLMGPHSRPIGVLAAHAMAR...QEERLPACTRFLET
VANLIAQTIR.....LMILPTSAAQAPQQSPRIERP....RACTPSRGFGLENMVG.KSPAMRQIMDIIRQVSRWDTTVL
VRGESGTGKELIANAIHHNSPRAAAAFVKFNCAALPDNLLESELFGHEKGAFTGAVRQRKGRFELADGGTLFLDEIGESS
ASFQAKLLRILQEGEMERVGGDETLRVNVRIIAATNRHLEEEVRLGHFREDLYYRLNVMPIALPPLRERQEDIAELAHFL
VRKIAHSQGRT.LRISDGAIRLLMEYSWPGNVRELENCLERSAVLSESGLIDRDVILFNHRDNPPKALASS.........
...............................GPAEDGWLD........NSLDERQRLIAALEKAGWVQAKAARLLGMTPR
QVAYRIQIMDITMPRL
>SP|P09570|NIFA_AZOVI/19-522
DLQLQALASIARTLSREQQIDELLEQVLAVLHNDLGLLHGLVTISDPEHGALQIGAIHTDSEAVAQ.ACEGVRYRSGEGV
IGNVLKHGNSVVLGRISADPRFLDRLA..LYDLE...MPFIAVPIKNPEGNTIGVLAAQPDCR...ADEHMPARTRFLEI
VANLLAQTVR.....LVVNIEDGREAADERDELRR........EVRGKYGFENMVVGHTPTMRRVFDQIRRVAKWNSTVL
VLGESGTGKELIASAIHYKSPRAHRPFVRLNCAALPETLLESELFGHEKGAFTGAVKQRKGRFEQADGGTLFLDEIGEIS
PMFQAKLLRVLQEGEFERVGGNQTVRVNVRIVAATNRDLESEVEKGKFREDLYYRLNVMAIRIPPLRERTADIPELAEFL
LGKIGRQQGRP.LTVTDSAIRLLMSHRWPGNVRELENCLERSAIMSEDGTITRDVVSLTGVDNESPPLAAP.........
...............................LPEVN.LAD........ETLDDRERVIAALEQAGWVQAKAARLLGMTPR
QIAYRIQTLNIHMRKI
>OMNI|NT01MC3311/36-560
ASQLEALYQVGRILAEEGNLTAVLDGVLEAVEKMGGMSKSIITLSDPETGRLLVRAVHDSNEGFAPLGGDDIVYRPGEGV
MGSIMQNGNTFICELPANEQRFLHRLG..LLDPT...LPFIGVPLF.LDAKPIGVLAAQPVFG...NRAFLREQAHFLEM
VANLVSQKVRSNQRYEQLQALLSSQAVGRSTTAMST....AIRIENERSGMQPVLLGKAASMKQVVNMALKAAQFDSTVL
VLGESGTGKELVANTVHYNSARASRPFVKVNCASLSDNLLESELFGHEKGAFTGAIATRKGRFEMADGGTLFLDEIGEIS
PSFQAKLLRVLQEGEFERVGGARTIKVNVRVVAATNRDLSAEVQKGNFRADLFYRLHVLPIEIPALRERMEDLPLLTEAL
LERISTKQHRP.LSITKEALRRLMMYEWAGNVRELENCLERAAVLSDEGHIDASHIIFSSGANREPMPALTN........
................HR.I....HNASSCALPSSADLSD........PTLEERERVMGALEQSGWVQAKAARLLGMTPR
QVAYRIKILNIPMRTL