HMM Seed Alignment: TIGR04514

Download Alignment

>gi|375011755|ref/312-418
LFTRYLFPISTDAERNYQNSLREERDLKKMKQYFYVFWSQRN---DYDPQTEWENYRKRVREVN-SLYDSGL---RPGFM
TDRGRVSLVYGKPILVE--QRK----------------------FEPGLPPYEIWKYD
>gi|327402639|ref/302-408
YYLASLIPIARPAEIKSILKTLKAKSPDLSRKHLQQFWVQTS---GVDAYNQWMLYKKNVVLVE-KNYGSNF---MSGFE
TDRGRVYLQYGTPNTII--VRE----------------------SSPSEYPYEIWHYY
>gi|255036421|ref/261-357
LLLGPLLYMSTNNEINEIKKA------EDYKKALDKYWLTLMNGNAPLAQQSIRSFYGRVEEAN-QLFTTYK----EGWK
TDKGMIYIVLGPPDKVQ------------------------------RSKDREVWTYD
>gi|518831818|ref/323-419
KLAKPVMYVSTSSEMNELGGA------SDAKKALDKYWLGLMSGNEEVARRTIRAYYNRVEEAN-RLFTTYK----EGWK
TDKGMIYIVLGPPDRVQ------------------------------RSRDREVWVYN
>gi|338213573|ref/282-378
ELTKPVMYMSQNQEINDLLGT------KDPKKTLDRYWLTLMNGNTDMAKRTISVFYNRVEEAN-RLFTSYK----EGWK
TDKGMIFIIMGPPDRVQ------------------------------RSKDREVWVYA
>gi|436834219|ref/322-418
RLVKPLLYMSTGTEIAELNAS------KEAKKALDRYWLTLTSGNEEVAKRAIRAYYGRVEEAN-ALFTTYK----EGWK
TDKGMIYIILGAPDRVQ------------------------------RSRDREVWVYN
>gi|522090106|ref/324-420
KLIKPVLYMSTSSEIGELNQA------QDTKKAFDRYWLSMMSGNEGVAKKAIKAYFDRVEEAN-KLFTSYK----EGWK
TDKGMIYIVLGAPDRVQ------------------------------RNREREVWVYN
>gi|408675272|ref/284-380
LLSKPLIYMTTSQELKIISDN------PNAKQALDKFFLTITAGNQLVSKKIIKSYYHRIEEAN-RLFTTFK----EGWK
TDKGMVYIILGPPNKVQ------------------------------RSRDREVWVYA
>gi|312131974|ref/276-372
TLKEALVYMSTSKEMEGTGTY------ESGKDAMDMYFLQLAKGDQELARKIIRGYYKRVEEAN-EFFTTYK----EGWK
TDKGMVYIIMGPPARVQ------------------------------RNRTREVWMYS
>gi|488782455|ref/328-424
DLIDPLTYITTKGELNKLKQS------SEKKKDLDRLWLELMSGNIKVAKRSIREYYRRVKLAN-KFFTTYK----PGWK
TDKGMVFIVFGNPTRVV------------------------------RTRNKEMWTYA
>gi|586957278|gb/256-352
ELIAPLTYLTTSQERKQLFDA------LEPKKAVDQFWLKVAGNNQPIARQLIRTYYGRVAEAS-QLFSAHK----AGWL
TDRGLLYLVLGPPESVY------------------------------RANEEERWVYR
>gi|518790307|ref/256-352
ELIAPLIYVSTSQERQKLFDA------PDPKKAVDQFWLGVANDDQDRARALIRAFYGRVVAAN-QLFSAHK----AGWL
TDRGMLLQVMGAPETVY------------------------------RSGNEERWVYR
>gi|551194203|ref/252-348
ELIQPLVYLTTSAERKKLYDA------PNPKKAVDQFWLNAAAGQQVIARQAIRTYYGRTRSAN-ELFVAHK----AGWM
TDRGMLYIAVGPPDAVY------------------------------RTATDERWVYH
>gi|517288163|ref/225-320
DLITPLIYLTTSAEREALYNA------KDPKAAVDAFWLRIAKDKNL-ARDLIRTYYTRVEAAN-KLYTSYK----PGWA
TDRGMIYIIYGKPNNIS------------------------------LSGDSETWIYR
>gi|497265963|ref/250-345
HLTEPLIYITTREENLKLKDI------NGDKREFDKFWLDLTNSPER-ARTIIKNYFDRVEQAN-RLFTTYK----EGWK
TDRGMIYIIFGPPDEVN------------------------------KNINGESWTYL
>gi|496485397|ref/260-355
AFAGPIRYLSTNEEWAELERE------GFSKQAIDRYWLRMTQSEDR-ARRIIRSYYRRVTAAN-RLFTSFK----EGWK
TDQGMIYVLYGPPDVVQ------------------------------ARYDGELWIYR
>gi|516341971|ref/259-354
DLSGPIRYISTREEWKRLEQN------NFSKEAVDRFWLKIGQTEER-AKKMIKGYYEGVEAAN-RYFTNYK----EGWK
TDQGMIYILYGAPDVVN------------------------------VTEGQEEWIYH
>gi|375011695|ref/276-375
HLGEPLRYLTTKSEYQELAAT--FGNAAETKAVVDKFWQERAGSLER-SKILIEAFYNRVQLAN-IFFSSYL----EGWK
SDRGIIYIIYGPPNRVY------------------------------SSTAGEAWVYG
>gi|521070665|ref/322-420
ELARPLYYLMNESEYNDLLAI---KNADSLKKAIDNFWLGNIKNAPK-AREIIRLYYERVEEAN-KQFSNFK----EGWK
TDPGMIYILFGPPLYVD------------------------------EGFGEMTWFYD
>gi|516843156|ref/294-392
ELAAPLYYLMRKGEYEELMQL---EDPDEIKKAIDRFWLRNIKNSKI-AKDVVSLYYERVEQAN-KQFSNFK----EGWK
TDQGMIYILFGPPWYVE------------------------------TVLDYMRWGYS
>gi|521070664|ref/324-422
ELARPLYYLMDDKEYEELMSH---EDPKELKNAIDRFWLSNVQNSNM-AKNVISQYYQRVEEAN-KQFSNFK----EGWK
TDTGMIYILFGPPLYND------------------------------HFSDQMLWSYS
>gi|521070662|ref/321-419
ELAAPLVYLMKDKDHEKMMAI---QSDDSLKAAIDRFWLENIQNAAL-AKNVISLYYQRVEEAN-KLFSNFK----EGWK
TDRGMIYILFGPPLDTY------------------------------QRLRTVRWSYK
>gi|268317031|ref/316-414
QMAEALVYLTYPDEWEQLRAA---RTPAELRARFDAFWGRLVGDRRK-AARLLRLYYERVEQAN-LQFSTFK----EGWR
TDRGMVYIMLGPPYVVE------------------------------DRVDEQIWYYT
>gi|488736233|ref/251-346
DLILGSRYITKNIEYNKMNKA------ENPKKALDEFWLARSKKEAV-AKRLIQSYYGRMEYAN-QSFSSYK----EGWK
TDRGIIYTIFGPPQLIR------------------------------QTNKELHWYYG
>gi|431797544|ref/270-365
EMIDKLVYISTRNEHEALRAA------EDKKKALDQYWLELTHDTEK-AQGIIREYFRQIEFAN-ILFTDFK----EGWK
TDRGMIYTVMGPPTGVF------------------------------FDADKEIWIYD
>gi|496326216|ref/271-366
EMAEMVVYISTRKEHESLQAA------EDKKIALDQYWIGLTKDEET-AKKLISEYFKQIEFAN-ILFTDFK----EGWK
TDRGMVYTVMGPPNEVS------------------------------FKLNGEIWSYL
>gi|496474402|ref/271-366
EMVDMVAYISTRREHEALMEA------TDKKLALDKYWIGMLKDEQTAIN-VIREYFKQIEFAN-ILFTDFK----EGWK
TDRGMVYTVMGPPNEVY------------------------------FRPNGEVWSYL
>gi|343082749|ref/270-365
EMIQMVAYISTRKEHEALLAA------ENKKLALDEYWIRMTRDEEA-AKKLIKEYFRQVEFAN-ILFTDFK----EGWA
TDRGMVYIIMGPPQEVY------------------------------FNLDKETWVYL
>gi|495475083|ref/266-361
EMVQMVTYISTRKEHETLLSA------EDKKKALDQYWYNLTRNPDT-AKELIKEYFRQVEFAN-ILFTEFK----EGWK
TDRGMVYIVMGPPSEVN------------------------------FYLDREVWSYG
>gi|522021629|ref/258-353
KIAKSMIYISTDKEIQSFLTA------RDKKSVLDNFWINSGGSVEN-AKRLIKTYYQRVAYAN-KNFTTYK----EGWK
TDKGMIYIVFGRPDETY------------------------------EVENGERWVYF
>gi|218962011|ref/287-395
EEYELMRIFLGNKIPSDWGKM----NQDTKRRYITQFWRDMAFSTNRSVQSIMDLVQKRIDYAN-RNFTHFK----QGWT
SDMGRIYIRNGPPDDIQRDTSS--------------------DESRFVRKDYQIWKYA
>gi|544919065|ref/301-406
TALEHLRYVANEEEIKKLKKA----LKEEQVQKWEEFWKSKDPVPETPLNELKEQYYQRLKYAN-VKFKTYS---KEGWK
TDMGMVYIKYGQPDEVD--RHP----------------------FDREEKAYQIWRYY
>gi|551210190|ref/292-396
KAIEQLRYIATAAEMKSMRKA----KENQKKEEFLKFWQKRDPTPNTPDNELMNEYYKRVNYAN-AHFTGFL----EGWR
TDMGMVFILFGPPSDIE--RHP----------------------FELNTKPYEVWYYY
>gi|397690602|ref/288-394
KAIEQMIYIASPADLAYIKEG---KTYEERLTRFLAFWDKKKPNPKMTVNPIMNEYYRRVEYAN-KNFKAFG---NEGWR
TDMGMIYITFGPPSYVE--RHP----------------------FDPNSKPYEIWDYY
>gi|385809208|ref/287-392
KAISQMVYIATPDELSKLKDS---KNNDEKLKNFLEFWKKKDPSPNNEENEVFNEYFRRVAYAN-DNFSNYN----EGWR
TDRGMVYIILGAPNNID--RHP----------------------FEYDSKPYEIWEYY
>gi|193215572|ref/304-409
EAISQLQYIADSDQIEYILAA---KSDSAKIQRFNEFWKKRDPSPGTEINELMAEYYNRVNYAD-QHFSSYM----KGWR
TDMGMIYIKYGAPDFVE--RHP----------------------FSTSTRPYEVWEFH
>gi|493983813|ref/297-402
LALHQMSYILNADTLKKYLNA----SLEEKKAFFERYWKERDPDPTTAKNELKDEYFKRVNYAN-TYFSTMT---QDGWE
TDRGRILIKFGFPDDIE--RHP----------------------FEIDSPPYEIWQYY
>gi|551212931|ref/277-382
TALLQMSYILTSEEKKELKNL----KQSEKEKFFRKVWAKRDPVVQTKINELMEEYYTRVGFAE-ENFSRGT---SGGWK
SDMGMVYILFGKPDDMV--RSM----------------------NMQGSYNYETWYYF
>gi|516702550|ref/291-395
EALDQMKYILTSEERTKLKKS----KKAEKEQLFKTFWDDRDPSQETLENELMDEYYKRVAFTV-VQYSGFQ----DGWK
TDMGMIYILFGPPDEKK--RYS----------------------DYSNQKAFEIWYYF
>gi|268317918|ref/306-408
EAIEQLRYIAKQKDIDYIKAG---KTPEERWQRFLSFWKKRDPTPGTPRNEQMEEFYYRVALAN-RKFGGRR----PGWQ
TDRGHIVVLFGEPDFVE--RRE-------------------------SSQPLEIWHYQ
>gi|575457568|gb/324-431
DVLAYLRYYASPERLRALRDA----SPELRPAVWAAFLRESDPVSATPEHEGLREYFARVRAAN-ARFGEES---TPGWM
TDRGMTYIVLGEPDQIADPAEQ----------------------DPNAKGRTQVWEYR
>gi|226225415|ref/316-423
EMLSYLRYFTTADRLKPLRDA----APLQRAEVWATFLRETDPVPATAEHEGLRDYFGRIRTAN-TRFRDDA---QVGWQ
SDRGIAFVALGDPDNIVDTGLI----------------------DPNARVRQQIWEYR
>gi|218962012|ref/236-342
DQIRQIRYIANQNEWKYLRRL----PKEKQAEAIETFWKANDPSPGTVRNELREQFYQRVMIAD-ERFTLHK--KIAGWT
TDQGRIYIKYGEPDDIY--SEV----------------------YALDKYPYIIWYYY
>gi|193216000|ref/308-412
LALRLMTYILSPKAIDELEVG----NAVQRRNNFKQYWKKKDPTPETAFNEVMAEYFRRVDYAFFNFYTTNE----YGWR
TDRGRIYILYGEPHKVD-------------------------RVFPINEPTRESWFYD
>gi|516842704|ref/341-446
VSIDLLMYILPEDRIKAMKDG----NAQEKEKRFRAFWEQRDPTPDSEFNELMTEYYRRIDFAF-REYRNPE--NPDGHE
TDRGKIYIKYGPPSARE-------------------------RSFPSKGRVIETWTYP
>gi|521071059|ref/332-437
IAIRHLKFILPEKEVDRINKG----NDREREQKFREFWEQRDPTPNTVFNELMAEYYRRIDYAF-NEFGSQE--NPMGHE
SDQGEVYIKFGPPKNKE-------------------------RRFPERGKTLEIWEYP
>gi|397689014|ref/284-388
YAIDILEAVMGKDASAEIKKN----SSGTLFNSLVDYWNKRFPSGKSVYNGLMHEFYRRADYAE-ENFSTMT--NKKGAL
SDRGIIYIKYGKPDKIE--------------------------RDYSDSAVKEYWYYE
>gi|385810194|ref/294-398
FALEMISNIESENALDNLLKQ-----NLSSEELLKKYWKSKDPTPQTSFNELMEVFYDRVDYAE-LNFRNLS--GSSGAK
SDRGKVYIQNGAPDRID-------------------------RGVNYDGKITETWYYE
>gi|397690627|ref/259-363
SAVKMLQPVYDEAMGD---------NEYKKKRFIKFYWEVNDPLYLTEYNERLLEHYSRLTFAN-LFLNNDE---KKGWQ
TDRGEIILRYGEPLNIMRIRPS--------------------MGEAGYEMKTDVWNYD
>gi|493985548|ref/294-399
LAIRPMRLILDKKTYKYARSL----SYDELEKWFKQYWKKRDPSKGTVYNEIMAEFFRRVEIAN-KRYSNRH---REGWE
TDRGRIYILYGEPKEID--DHR----------------------YATETKPYQIWVYS
>gi|397689286|ref/303-409
KMFDQIKYIASGNEINQYKKL---DSLNGKREFLFTFWQRRDPDPSTPVNEFKEDYMRRVEYVN-QNFSYYS---RPGYL
TDRGRVYLVYGEPDQRD--RYP----------------------NQSNMKPYEVWFYN
>gi|385809344|ref/309-415
DIFDKSKYIATSQEIDKYKKL---SGVEGKREFLFNFWNGRDQDPSTKENEYFYDYLQRVESAN-SRFSSMQ---RAGWK
TDRGRVFIIYGEPSEIE--RYP----------------------NQIESRPYEIWYYN
>gi|493988159|ref/311-417
KEFEMAKYIATRQEERMFKNL---DNANAMRKFLTQFWYRRDKMNQTPFGTTRINYLRRVEEAN-RRFRAMG---REGWQ
TDRGRVLLIYGEPDEIE--RHP----------------------SSMDLLPYVIWYYH
>gi|544919066|ref/319-427
IIRAELSYIATQDELRMYDQL----NLTGKQSFVKEFWNKKDPDPLTPVNEFKIQFYQRIFEAN-QMFASQSDDRKTGWR
TNQGRIYVVYGKPDFIE--RHH----------------------YTRQVKPWEKWIYN
>gi|519104480|ref/38-146
EFFEYAYLIITNQEKNIFFHL---PDTESRQEFIREFWEKRDPTPKTKENEFKDEFYRRIEYAN-QRFKEGP----PGWK
TDRGRIYIYLGFPDKIDEIHTH---------------------NMPGVRGPILWWVYY
>gi|519108109|ref/31-138
DFYETARLIMAKPERDIFNHL---PDKDAREEFIHNFWEKRDPDPATEENEFREEFFRRIEYAN-QRFKEGT----QGWK
TDRGRVYIYFGQPDRIE--RRP--------------------MLNNPDVKALQVWIYY
>gi|374850632|dbj/54-172
WLEEDVRWIITEEERAAFLKL---ETDEEREQFIEQFWLRRDPNPDTEENEYREEHYRRIAYAN-EHFSSGI----PGWK
TDRGRIYIMFGPPDSIE--SHP---------AGGTYDRPIWEGGGTTSTYPFEVWFYR
>gi|94970349|ref/82-200
WLDEDVKYIITDEEREAFLKM---SNSEERDAFIEQFWLRRDPTPDTPENEFKEEHYRRIAYAN-EHFASGI----PGWR
TDRGRIYIVFGPADEIE--SHP---------SGGSYQRDYSEGGGETSTYPFERWRYR
>gi|522214349|ref/69-187
WLNEDVTYIITDEERQAFKHL---QTDEEREQFVENFWKRRDPTPDTEENEYKEEIYRRIAYAN-DHYASGI----PGWK
TDRGMIYIKYGAPDEVD--SHP---------SGGSYERPMEEGGGETSTYPFEDWRYR
>gi|322435492|ref/78-196
WVDQDVRWIITDQELSAFKHL---SNDEERDQFIENFWLRRNPNPDSPDNEYREEHYARIAYAN-EHFAAGK----AGWR
TDRGHIYIAYGKPDNID--SHP---------SGGNYERPMEEGGGSTSTFPFEIWHYR
>gi|225872997|ref/81-199
WLNETVRWIITDKERRAFKAL---TNDEERDAFIENFWARRNPDPGSPYNSYREEIYRRIAYSN-SHFSDGE----PGWM
TDRGMIYIKYGKPDSIE--SHP---------SGGTYNRPISEGGGQTDTYPFEDWHYR
>gi|116620027|ref/381-488
WVKEDVAYIITDAERAAFKRL---PTDEEREHFIEQFWQRRDPTPGTPVNEFKAEHYRRIAYAN-NNFSSSI----AGWK
TDRGRVYITYGPSDEKE--THP--------------------TGGSSYSYPYEQWMYH
>gi|522201929|ref/39-146
WLNEEVPYIITNAERSAFLAL---KTDADRDAFIQTFWEIRNPDPNSPTNQFRDEYYRRLAYAN-DQFGSPG--RHDGWR
TARGMVYITLGAPQQLT--PYR----------------------SSQYLTPLEIWFYQ
>gi|320105430|ref/53-160
WLNQEVNYLITSEERTEFLHL---TSDTAREQFIETFWKIRNPSPAAPTNVFKDEHYQRLAYAN-QHFGTLS--LNDGAS
TARGMVYITLGEPAQIQ--SYP----------------------ESKHLRPIQMWFYQ
>gi|390956104|ref/36-143
WLTQEVNYIIESPEREEFLSL---KTDAERDAFMKSFWDSRNPDPGSEINTYKEEHYKRLAYAN-EHFGNYE--ARDGWA
TDQGMIWITLGEPKQKI--TYP----------------------NRANVRPIIIWFYQ
>gi|519104784|ref/36-142
WLKEDVAYIITPAEKEVFLKL---ESNKERDLFIDEFWRQRDPTPGTPRNELKEEHYNRIQFVN-ERFGKLS--PLKGWQ
TDRGKTYIILGSPNHVE-------------------------KFHTIDTYPIELWYYH
>gi|519104786|ref/35-141
WLEEEVVYIISPAEKEVFLKL---ETDRERDNFIEEFWRQRDPTPGTPRNEFREEHYLKIDFAN-RTFGRGT--PVEGWR
TDRGKFYIMLGRPASVQ-------------------------KYSTFDIHPIEIWYYN
>gi|519104779|ref/38-145
WLEEEVVYIITPKEKDVFLQL---ESDRERKMFIEAFWKQRDPNPNTPENEYKEEHYRRISYAN-QTFGRAS--PGPGWR
TVRGRIYITLGEPNTIE--RFE----------------------NESEIYPTIIWFYN
>gi|519105344|ref/36-143
WLEEEVVYIMAPIEKEVFLKL---KTDRERDLFIEAFWKHRDPTPGTPENEFKKEHYSRIRYVN-HFFGRQA--PRPGWR
TDRGRMHIILGEPNDIQ--RFE----------------------GKTQVYPTEIWFYQ
>gi|519105208|ref/31-137
WLEL-VSPIITKTEKDVFLKL---NTDQERDKFISLFWSRRDPMPDTRENEFYQEYMKRVRFSD-INFGHAS--FKKGSQ
TERGYFYLLLGPPLERQ--IYA----------------------TQADIWPLELWHYK
>gi|519104481|ref/36-143
NFLDLTHYIILSEEKDVFMQL---ASNIERDTFIKTFWKQRDPTPGTPQNEFREEHIERFNHAN-KIFRRQT--VRPGWK
TDQGMFYIILGEPVSKE--RFY----------------------GTLGLYPCEIWYYY
>gi|519108107|ref/53-160
EFLKLTRYIVLDEERKVFNQL---ATDRERDIFIKAFWKQRDPTPGTPDNEYKTQHIKRFNYAN-KFYGRGT--PRPGWM
TDMGRIHILMGEPVSKE--RFE----------------------TTIGIRPVQAWFYY
>gi|297183436|gb/72-179
DFYDSVEVILTPDEEKVFERL---GSDFQRDEFMERFWRVRDPSPGTSRNEYKEEYEERLEYVE-FHFGRGE--PGPGRK
SERGRMYLLLGEPMNIK--SLP----------------------YEQQTYPIEIWWYH
>gi|519103945|ref/36-143
EFYSKVRYLITRQERKIFLNL----PPSEKEAFIKEFWGKRDPDPDTEENELKKEYFERIEMAN-LLFKSGG---TPGWL
QDRGRVYILLGPPMERY--TYP--------------------RGREYYDFPEEVWYYG
>gi|519102535|ref/53-160
EFFAKVRYIITKEEERIFLDL----PDSEKEKFKEEFWKRRDPDPYTEENEFKTEYFNRIERANELFFGEGK----DGYW
TDRGRIYVLFGPPMDRI--VHP--------------------LGYSYYGRCSEIWYYG
>gi|519108528|ref/40-166
KFMDIIRYIIIPQEAKIFREM----PPEDRGEFVTDFWYRRDPNPETKVNEFRQQYYTRLAITD-KAFRTAI----PGWM
TDRGRIFILLGPPTDVI--KKSMGDATVEPKKGVRELSSDLLEEGTWTERPTEIWIYN