HMM Seed Alignment: TIGR04499
Download Alignment>gi|496176540|ref/11-622
FGITYDTWKQTCQMY-FKLSEGSKKS----YLQWFPFSKITADEEEYIASEEFFEKYIRKAAFVLFPEAMHQSENFLQKG
DGSFRDSSLLS---PVLY----LVLQAIGKEISNHYQTVRNMN--IDAFYAGNYD--YM-------RAKYKQDYDEFYKL
INAHIS---DCQYFIKTDITNFFPNINLDILINQIDKRSN---LADVCFTPTQLKMIKELLLFCGDGK---FPTIENSTA
SSYLATIVYMDEIDNRIYKFIKEKIDCISDFKIIRYVDDMYILINSSHDIVRLHD--AYNQIRNEYSSIL-KEYGLSLNA
KKC-CLKPAIEINGELKKSLYDE----YFNGIQHDIEELFEG-----------KFQEFLDSLLLALKTDYIDVEYYNLMI
EQYFSSDDI-EFTPTEVYNHYIYECD------EVIQDSKVISTICK-LINTDVSFISIDPKRLSIMIMKTQNSP----AI
KALLNQLFQRNRKGLWNSYDTSIAISYLIQSEFRHIDLL-DALNENSTNLKNYYYYCCKNSFLSTLCNKRINDYIHIIDK
------DWKAYFLYFMYWVEKKRHNTLAEYAF-YKNYFDRFTADL-AFYYNYD-PTCKKPN----------YKGFYK---
-EPAFKTFYKEI---DGSEEIIKRAHYLRNANPLSHSSAGLI-DKST----TSNDIKRCIEDLNSLI
>gi|330837929|ref/2-617
FDISYTDWKSVCEMC-FNLKQNTCKA----YLQWFPFGELPYQDKKYICSEKFYRKYIQNPAVFLYSKTMYQTENFLQKT
DGSFRESFLVS---PLLY----LLLQGIGKVIHDQYSSQRSSE--ISVYYAGSYEDKNM-------CASYKPSYDRFFKI
LNIYAK---EYKYFIKTDIANFFSNIKINKLISHVDAICN---REKIAFSQMQLTLFKEILNYCGNGQ---FPLIENSVA
SSFLSTIVYLDDIDAALYKYISTKVKCICSFRMVRYVDDMYILFSSESAFEELHE--TYNIIKNEYSSIL-KGKGLALNM
KKC-CLKETTKLKGELKKSLYDR----SFQEEKWRIKNTFVS-----------EIGSFLDALLEELSNDSLDTERYNEII
DKYFSLNDM-EVTPDEIFNSVIYESRNN----LMWRNPFIVDKIMR-LIKKNIAFITLDPKRLTSMILKTREEK----VI
KAFLAQLFKKDKNDTWNAYDTTITISYLVQRRFRHGDLL-HVLNRRHPHLFQYYENYCRKSFIADLRKGENWRLITALVQ
------DQIAYYLYFMYLCEYKKGNFMTSFAY-YKSYFDRVTADL-AFLRNPK--GENKPK----------YRKFYK---
-KKRLCEFYEEFD--DSAYNIIDKAQALRYANPLTHSSSELL-SDEN----TSERLKQSIRELSTLL
>gi|517013448|ref/2-619
FSIDYEDWKGVCSQI-FIQKRGRKKM----YLQWYPFTRLSNHDKEILLSEDFFCGFIQTGIFLYYQENWLIANNYIMKG
DGNFRNASLIS---PVMY----LLALTIGKTISKKYVSLRPSG--AIAFYAGNFD--ED-------RLYYKKEYDMFFKT
LNDYSQ---SYQYFIKTDIKDFFSNIDVNRLFEKIDHRLA---ETGNAISQKDLLLYKELLLCMGQGE---FPLIENSAV
SSFLATIIYLEQADIKLHEYIQTKEKEIDKFLMVRYVDDLYILFNSQTPENALMP--VVNRILNCYLSEL-RGINLSLNR
GKT-SWKRVSQLNEELKKSLYDE----QVNGKEFSITDLVDSS----------ILLNFLEQLGNELLSYRLDISRYTELI
KIHFSLSGV-EYTPQEVYNSLVYEKH------DLFSHKKVIEKLLS-LISFDYNFLKLDAKRLTVMILKTKNGS----LV
KCLLSKLFNSNKSGTWNIYDTSLAINYLLQRNFQHHDLL-KILKQEEKYVYSYYDLFCRCSFLKSLNKSNQS-YISIFGE
KGFSRNDDKLFFLFFMYIIELKKKNNLSAFAY-YKNFFDRISAHL-GLALNND-GAKGKPN----------YKAYYK---
-EVAFRKLYGNIL---NSEPVIRKAHEIRNSNPLSHSSAELI-DSNT----TYEDILKSISDLSFLL
>gi|560153019|ref/7-630
TGISYESWKETCDMYLSTVTDISLRRSFAMYLQLYPFTRITSVDKTIISSKGFYDNFIKSGAIFHNDSVLKRSNNFILKN
NGGFRDAQLLS---PLMF----LILQAIGVEICKRYRQKRETDENIVAFYAGNFL--DH-------KSLYKSQYQEFSKW
NNYYAE---EYPYFIKTDLSDYFSNIKFDKLLNLINNNVQ------AKFTPIQQKTIIDILNYCGDGK---FPLVQNSTA
SSFLATIVYLDIIDVKLGNFIK-KLPNIEAYKLIRYVDDLYIWLKPKTE-SNLNQ--EYNDIRAEYSSIL-NSYGLTLNT
KKT-GLYTGSDIDEKLKWSIYND----VVNEQGNAVEMYLDNKNWTE------NVNKFITSLFEKKFDSTLTKESFQKVI
NNSFKSDDIVGISGDEIFKRIIYDHS------EYLQDDFVIENMSSLLVRQGISTFYMSPQILTTMVLNTSPGKNKNIAV
KSLLNQLFIRNKNQVINRYDIVIALQYLLNTGFSHYDLKEKIINRNEHNLYLYIKKFCCQNFLIDFKKHNDYTHFKIING
------DWKTYYLYFNYYVEISKKQYMEAYAY-FKTYFDRMTALI-AAYKN-----NKKLN----------VNKYFK---
-TKQLEKFYKTIIG-KNVGKTLEKAGKLRNKNPLVHSSMEMV-DWSD----WTEIINKMINDLNKIL
>gi|554766822|ref/9-640
FHISKKVWKDTCNMY-FKISSGSLRN----YLQLYPFSKMTWNDKQYLMNDKFYSKYIKNGAIVQFTDVMRITDNYLLKK
DGSFRDSTLLS---PILF----LVLQAIGKEISLKYQNTRSTQ--IATYYSGNYS--SM-------NAKYSKEYSYFYRE
CKRCAT---KYDYFIKTDISSFFVNINVDKLIEKIKVNCN------DSVQLNQLKIYKEFLQYCGKGK---FPLVENSIA
SSYLATVVYLNDSDNRLIDYLT-NNLNIADFKIVRYVDDLYIFSNEFDIR-------SFHKIRNKYSSYL-KKEDLAINS
EKT-KFLRSDELENEIKTSFYGEDQIKIVDDSDLNLNNIRD------------RFLQFLKSLNDLLADNELDYKEYKKII
DSSFKSDS--NLVPDELFNKIIYDKKINSGATSVYQDPYILSELSK-LIAYD-DFFWVDPKRLFIMFLNTKDGK----LI
KPILS-MLGKKKAEEWTFYDLVMAITYLTHRRTSFRNFY-SHIYNIDHNLATYLDYDYTGNFKSQFESVAINNLITVTDA
DITS--GWISYYLYFESIIEYSKNNILTSYAF-FKNYFDRTTANI-DFYFDENKRKRMKRRGRKGKGKGSIYSGYYK---
-KQQLQKVYSILNKQNETDEIISKANDLRNNNPLSHAAAQLLLDIDNPSEPKTEELIATMRSLFKLL
>gi|488399758|ref/2-615
ININFNEWEKVCKSF-FKLNKSILES----YLQWYPFSKLTENSKCTILSEKFFFNFIKNGAIFKEYNTFNFPSHYSQKT
SASFRNMTLVS---PFVY----LYIEVVGYHISKKYTRKSKY---VRCYYSGDLS--EN-------EFSYKNSYDKFFAD
INALSS---TYDNFYKFDISNFFDAVDINLLFKLIN-------EGEEILDTRSSLIYKRLLQQIGGNK---FPTLENSST
LSYLATYIYLDKVDYELEKVLQ-KNSKIESFQIIRYVDDLYIFFNTMES--ELNL--VSSEIKNVVIDAY-RKVKLNLNE
NKT-KLGKSSEVNETLSVALYNH----YVYKEEIDIAHFYDKN----------KILLFLDDLYN--LAYSHNHENFKYIL
DKHFTKEGI-TYSSDEVLRYLAFYED------ELFQDEVIIYKVKR-LILTDYNFVNYKINIFLRIILNTNNGD----LI
RYLLNELFKKDN---FNSFDVAISLNYLLLRNFQHTDLM-YKIRAVDSDIIDYINRYCKQDFLKELDKEYNY-IIKLNLN
REFSDSSLKVWYLYFLYKYYDKNGDTLEAFAY-YKTYFDRMVSLL-MYYKKISIGKKGSPN----------YKRHYKVGN
AQTDFEKLNARYYKNKNVSTLLSELYKLRNFNPINHSSAEIIEDKML----KKSQITNLIKQAETLL
>gi|149358|gb/2-615
ITLQHQDWERAVNMI-KNIPPSAKNK----YFQTFPFFLLSETSWEELLSENFFYSYIKSGEFLTYQENLSFYDRTIQKS
HGAYRQTRIVS---PIIY----IFLIAIASQVERIYVEKRTND--MSVYFSGSFEKEKN-------TAHYKQSYNTYMTE
LNACQE---EFDYYFQTDFSTFFHLVDTDNLFNKID-----------RLDPKSALVYSSLIKMIGQGR---MPIVDGNSG
LSFLNTVVYLDDFDKEIIDSLK-TIVEIESFKLVRYVDDLHIFIKCANK--DLDF--LNYKVYNLLCEKA-TKHHLEINS
SKTKSFTPTSELSTKMNTDLYNF----FVYNEDVDFEQYFSKN----------TLIEFLDKLNN--MSVNADFSEYEKEV
LYTLENPEI-VSDGSYILNAIVYNKS------TWSQDYDIKNKISL-LVNSNYRKLRYSAKALITLVLNTRDGD----II
KGLLNNLFTTFKNGTNDIIDEIILIEYLVQRKFNHKDLM-TILKADDHGIKEYIKAYQTSDFIKSLEKNKVIFYTNQKEV
YPLISKDKILNFIYFRAKYFESLDLVLESFAY-YKNYFDRFVAHA-MFCTGID--SGRKPN----------YKLYYTEGK
LIDGLKQL--NFLSSDEITKIINEAHKIRNSNPVSHSSAGLLQNEDF----SRYRVKSSLNDLKIII
>gi|497319848|ref/12-647
YFIDFKLWKDALELLKFQIKQKHSNRHFN-TLSMFYYEKLHVDCLD-AEPQTYFQTKIASSLFYGLKQEFGVFSYVIPKP
GLGLRDYKFFTYPMRAVYYTIGLYLLKLSQEFILETHRKANR---IEAFYGGNLTYKEEELKITAKNIYFRSFHEQFKQK
IKGETENESQDKFILQLDIENYFNEISIPKLLEFLHINIKPSIQASMSYDSLTREQIVCLFQFIANGQSSGIPQSDNNII
SSFIGYL-YLVFGDLIIDDVLKKYIGIIDFHKIIRYTDDIYISITFKHEINDEDQGTIIHSIASQISEVLYSRLNLKLNL
KTRLYRMEKQDEKEELLKNLHKA----SLGDEYIDTSEEENQQCNKEPKAAIETPQEKLDKVFEELIKIK------KSRV
EDYFIRD---KSTQDEILQT-VFDKSVE----QILDKPENKNKIQSIFMNFNFDLVKVKPLEILIVLLKDEI------SL
ANLKNFCLNKKI---ITIGDADLILKFLSQTNFGEKKLL-LKLKENDH-MKDIIDTFINGQLNCSSPG-----YYRLTC-
------MHMHQVANMPEVIEQTRLRVLSEKESSYSVALNHLLNEIHAICINKE--KANKKK----------YDV------
-HDVIKFLQLKNVP-HEICIKIRNLFDRRNSNRISHPGSDDSIAWEV----TKDEYWDYYENVGKCL
>gi|428308967|ref/13-634
YFLNFSLWQQAKKLLDFQLSQMERNKHYN-TLSMFYYKQLASQATA-LETEEYFNKRVANNLFYGLEREFAVYDYVIPKA
SLGLRNQKFFTYPMRVLYYSIGLYLLKLSQELLQNYVKNNER---FKCYYGGNLLFNKDSLVIKHETTFYKPNYKEFKKQ
VRKQATNDVDKKLVIKLDIQNYFDNISITTLLNKLDRLIKPSIKESLRFDASTKEQITFYFNYIS-GKQGGIPQSDNDII
SGFIGHV-YLLFSDLIIDTEISKYPTEIKEHKVIRFVDDIFIIINFLESTKQKKKEAIADSLTSQIADVLHYNSGLRLNT
KTKLYWLNNLEQKEELLKDLK------KVSPEYPSNDDDNEE-----------APHKKIDHIFDELQKLK------NSSI
DISLGYD---GSLQEEILKE-VYDESIS----QLLETEENKNRIEEIFNKFNFDLVKVMPREIILIISKNQK------TL
NRFLKFLHTKNQ---LTTRDLYLIIKFLCQTHFKNRNLL-KKLTCSEA-FSHIATVYQEAKILSDYPG-----YYELLG-
------GQLIFLSDASQIIEQIRLRIFHEKIGSYSVALNHLLNEIHAICLLLD--ENKKKK----------YEA------
-DDAVNYLTSKFVP-HEICIDIRNLFDRRNRNTVSHPGSDQNIAWGV----TENEYMQYRDAVGKCL