HMM Seed Alignment: TIGR04488
Download Alignment>gi|134094420|ref/4-153
SRRDALRIATVLGLAITAGILK---PTDVFAADWKS---GGFDAKSLPETLKALGAS--GAQISTD--IAVNGPDIAENG
AVVPVSV-TSKAAK-----TEFMAILVEKNPNPLSASFTI-PEGTEPTVSTRVKMGGTSNVHAL-VKADGKWLIASKEIK
VTLGGCGG
>gi|71908745|ref|YP_286332.1|/4-155
QRRTVLKSGSGAALLGMLAAAGIITPGMALAD-WNK---AAFDAKSMADTLKALGA---GSPADSKD-VQVTGPDIAENG
AVVPVGV-ASSLPN-----ISMVAILIEKNPNALAATFVL-PEGTEANVQTRVKMGQTSNIYAL-VKSDGKFFMATKEIK
VTLGGCGG
>gi|197121998|ref/10-162
GRRRFLETTGGATLLGMLVAAGILKPSWGRAADWNK---AAFEARTMKEALEALGA---GTPADSKD-IVVTAPDIAENG
AVVPITA-TSNLPD-----TESIAFLVEANPNMLAASFLL-TPASLPVVSTRVKMARTSNVSVL-VKAGGKFHVATKEIK
VTLGGCGG
>gi|339327600|ref/4-151
KRREVLRVTAVLSLMAATGL-----ISEAQAAEWNK---NAFDGKSVADVIKALGG---SGTEKSTA-ITFTAPDIAENG
AVVPVAV-TSTIPD-----TEQIAILVEKNPNTLAADFVI-PAGTEPFVSTRVKMGQTSVVHAA-VKAGGKWYVASKEIK
VTLGGCGG
>gi|145588988|ref/4-150
QRRSLLKYSAVFGLMASAGL-----ISVAQAQEWNK---AAFEGKGLDDVFKILGA---GSPDKSAA-VTLNAPDIAENG
AVVPVGI-TTTLKA------EQMAILVEKNPSALAAQFFI-PAGTEPFITTRIKMGQTSNVYAL-VKADGKWSMAVKEVK
VTLGGCGG
>gi|17547976|ref|NP_521378.1|/15-163
TRRDVLRAGAMMALLVSAGL-----ATPAQAADWNK---SAFDARGVGDVLKSLGG---GAVDKGGAGIQFNAPDIAENG
AVVPLVV-TSSLPG-----TDLIAILVEKNPNTLAATFAI-PAGTEPYVNTRVKMGQTSMVYAA-VRAGGKWVLASKEVK
VTLGGCGG
>gi|91788491|ref|YP_549443.1|/2-155
ERREFLTSSSGATALALAAASGLVPAYAQNAPGWNK---VAFDSKSFAEAAKTLGAT--SAPVESKE-LVLQAPEIAENG
SVVRVGA-QSSMAN-----TTQIAFVVEKNPSALAALFDI-PAGTDASVSTNIKMGQSSNVYAL-AKVGDKYFYAVKEVK
VTLGGCGG
>gi|124267622|ref/4-156
TRREMLRHGAAVATLLMSAGLLPT-TVRAQAAGYNA---GAFESKTMADLMKTLGA---SAPTESKD-VTITGPDIAENG
AVVPLGA-ATALPG-----VKNLLLLVEKNPSIMTSMFEL-TDAVEASVSTRVKMGQSSNVFAVAMMNDGRVLYAQKEVK
VTLGGCGG
>gi|337279014|ref/3-151
TRRQNMKQTVALVGALASTGLLPL-PARAFNK-------KAFEAKSVLDAAKAFGG---DTLVESKE-VTIQGPDIAENG
AVVPLGA-ATTAAG-----VKHMLILVEKNPNVLVAMFNV-SDAVVPNFATRAKMGQSSDVYALAVMNDGRALFAKKEVK
VTLGGCGG
>gi|291614162|ref/4-153
LRRNFLKSMGAVMAVCAAGLLK---TSGVFAATWNN---LAFTSKDTADAMKNAGY---AGAAENKD-IMIKVPDIAENG
AVVPVEV-SSNIPG-----TTSIAIFVDKNPNPMIADFEF-MNGAEPFIATRVKMASTSIVRAS-VKAGGKVYTNSREVK
VTIGGCGG
>gi|74316584|ref|YP_314324.1|/4-155
LRRNVLKSAAGAGTVAVAVAAGLLKPTQALAA-WNK---SAFEAKNVADAMKGLGS---SGPSDSKD-IMIKAPDIAENG
AVVPVEI-TSKLPD-----TTSIAILAEKNASPLVAEYAL-AGGTQGYVSTRIKMGQTSLVRAV-VKAGGKSYTAAKEVK
VTIGGCGG
>gi|78484948|ref|YP_390873.1|/2-155
KRRSFLKGTLATGAAAVAVNAGLLTPSTVLAA-WNK---KAFEAKTADDALNATFGS--ASAAKSGD-IELNAPAIAENG
AVTPIKVDASKMSG-----VESIAILASKNPMPLVCEYSF-SGPAIGYVSTRIKMGETQNVMAV-VKAGGKLYKAEQEVK
VTIGGCGG
>gi|118602784|ref|YP_903999.1|/2-147
KRRLFLKNAMSGSVFATVVGSGLLTPSVVFANS------TSFKAKSDVASVTV------ANAGQGS--FKFKAPKIAENG
AVVPMTVDASKMKE-----VTNISFYIKNNPTPLVASFNL--SGAQGYVSTRVKMDKTSTVVAL-VTADGITTSKTQEVK
VTIGGCGG
>gi|89094211|ref|ZP_01167153.1|/4-152
NRRSVVKAIATGGALIGASVLM---PRIAMAA-WTT---KAFEAEDQATAMNELLG---GTPEESAE-VTLKAPDIAENG
AVVPVTV-RSSLAD-----IESMSIFVKDNPTPLVAEFMI-PAGTKADVSTRLRMGKTSQVTAV-VKAGGKLYSASKEVK
VTIGGCGG
>gi|193212735|ref/4-153
SRRDFCRTVAGSAASVAVLSMM---PGTLLAK-WSD---KAFTANELDAAIAAKYG---SQPIEDSTAIEIKAPEIAENG
AFVPVTV-STTIPG-----VTNLSIFTPANFNPLVASFDV-LPRMKPDVSFRMRMAKTSNVIVI-AQAGGKLYRATREVK
VTIGGCGG
>gi|78189876|ref|YP_380214.1|/4-153
TRRQFFSTIAGAAASAALVAAL---PERLLAA-WSD---KAFTASTLANAIAGKYG---NLPIEDSTAIQVKAPEIAENG
AVVPITV-ATNIAG-----ATNISIFTEANFAPMVASFDL-LPRSLPEVSLRMRMAKTATVVVL-VQAGNKLYRATREVK
VTIGGCGG
>gi|334111041|ref|ZP_08485314.1/3-155
TRRSFLKKSLAFSAGSFASTLGLLAPLKVFAE-WRT---ENFKQGPLEESLKRSFKD--QKITESKD-IEIKIPLIAENG
AIVPITV-SSSLPG-----VSTVSIFVAKNPVPLAACFEL-SPDLDPVVSARLKMAETSEVIAV-AETSGGLYSARQLVK
VTIGGCGG
>gi|357404679|ref/4-149
SRRTFLIQSVIACSGVIA-------PRLAFAD-WAE---DHFAPGKLDRTLDRLYAD--ATIVESDA-IALKLPLIAEDG
AVVPITV-SSTLAN-----VESIAILVEKNPVPLAAIFNI-APETEPFVSAHLKMAETCDVIAV-IKSGETLYSARQQVK
VTIGGCGG
>gi|296273345|ref/2-150
NRRNFLSLGLGAFAVASLA------PSTLSAVDFRKTLPKAWTAVKLEDGIKDVFGT--SATTQGK--VKLKAPDIAENG
AVIPVTV-SSKLAG------SKVAIFQDANPETTVAVFSV-PEGGIIDYSIRIKLAKTGTVTAV-VESGGKLYSASKEVK
VTIGGCGG
>gi|157736821|ref/3-150
NRRNFLGLGLAALAIAAV-------PGRLSAIDFRETKPKAWTATKVDDAIKELFGS--STLVDGG--INLSAPDIAENG
AVIPVSF-STELKA------TKIAVFQDANPESAVAVFNL-NEFSVPDFAIRIKMAKTGTVTVV-AEADGKLHSASKLVK
VTIGGCGG
>gi|121998720|ref/9-161
QRRKILTGALGLGGVGTAVGLGVLAPSQALAS-WRE---ESIMATSLEEGLNAVLGA--SEYEESDE-IHIDAPEVAENG
ETVPITI-DTSLPD-----VESITVYVPENNAPVSAVFEL-GGKTKPKVSQRIQMADTSDVVAV-AKSNGKLYGTSRRVR
VTIGGCGG
>gi|117926990|ref|YP_867607.1|/10-156
TRRSLMAGAGSVALLAMGT------AKNAQAN-----------GDKVLANIKEHMGS--SAYAESSA-IKIDAPIIAENG
AMVPVKI-TIDHPMDADNYIQTIAVFVDNNPTPFAGLYSLTPANGKAFVSSRLKIGKTSQVRAIAKTNTGKLIGASKEVK
VTIGGCGG
>gi|149204416|ref|ZP_01881383.1/4-138
TRRNVMIMGAGAFVAFGL-------PMRATAAG--------------EDRIAEFTGG--AAIADSG--ITLTAPEIAENG
NTVPIEV---AAPG-----AVEILVLAMGNPTPGVATFKFGPLAASQTASTRIRLAGTQDVVAIAKMSDGSFAKASSNVK
VTIGGCGG
>gi|159045346|ref/4-138
TRRETMAIGAGAALAAVL-------PGVVSAA--------------VKASIDEFTGG--AEVGTGG--VTLTAPEIAENG
NTVPISV---SAPG-----ATAILVLALGNPTPAVAEFKFGPLAGDQSASTRIRLAGTQEVAAIAKMADGTFSSETKTVK
VTIGGCGG
>gi|84686973|ref|ZP_01014856.1|/4-138
TRRDALAWGLGATAVAML-------PMRAFAA--------------ADDAIAAFTGG--ADVGEGD--ISLDAPEIAENG
NTVPVTV---AAPG-----AVAIRILAAGNPTPGVATFNFGPAAGSQSASTRIRLAGTQDVIAIAQMEDGSFIQTAKTVK
VTIGGCGG
>gi|126732564|ref|ZP_01748362.1/4-144
TRRETLALSAGAAAAALL-------PVSAFA--------QAAADAEMVGSAEEFLAG--ATAAEGD--LSLTAPEIAENG
NTVPVSI---DAPG-----AVEVRVFAMGNPTPGVAAFRFGPLAGSRAASTRIRLAGTQDVTAIAKMEDGSFQTASKTVK
VTIGGCGG
>gi|119386856|ref|YP_917911.1|/4-140
SRREALWIGFGGLAAAVL-------PGKAALA------------ATVDELTATFTGG--AAVGEGG--LTLTAPEIAENG
NTVPVEV---NAPG-----AVAVMLLASGNPEPAVATFTFGPAAAEQRAATRIRLAQTQDVIALAKMGDGSVVRAQTTVK
VTIGGCGG
>gi|83954854|ref|ZP_00963532.1|/4-140
TRRKVLALAAGTTAFAALSGL----PAFASLT---------------DDAIAELTGG--AKIGEGA--VTITAPEIAENG
NTVPIEV---DAPG-----AVEVTLYADGNPVPNVATFKFGPLSASRSASTRIRLATTQNVVAVAKMEDGSFQMAKANVK
VTIGGCGG
>gi|114706578|ref|ZP_01439479.1/5-152
TRRKLFTLAAGAGTLAVAANL----PRTANAT-----------PEEAQKAISEFTGG--KEPQSGK--ITLTAPEIAENG
NTVPISI-SVESEMTGDDFVESVTLMAEGNPNPEVATFLFTPLSGRAEATTRIRLAKTQNVVAVAKMSDGSVYSDRKEVK
VTIGGCGG
>gi|307946541|ref|ZP_07661876.1/4-149
TRREALGLSAGAAAFLAIG------TKVSFAN-----------ADATEAAIMEFTGG--ATPAEGK--ISLDTPEIAENG
NTVPVGV-TVDSPMTADSYVASVLILADGNPNPAVATFHFSAISGDAEAKTRIRLAKTQNVVAVAKMNDGSTFIDRKEVK
VTIGGCGG
>gi|188583362|ref/10-156
NRRQALAFGTGAVVATAFAFR----AGPALAA-----------KPATDEAIKAFTRG--KEPVRGK--VKLELPEIAENG
NTVPMTV-SVDVPMTPESYVEEVMIVAEGNPNPGVISFHF-TPSSVAEANTRIRLAETQNVIAVARMNDGSVFSDVRQVK
VTIGGCGG
>gi|148255073|ref/5-150
NRRQAFLLGGGFVALTVL-------PMAANAE----------PSNDAAELIKKFTGG--KEAAKGK--ITLDLPEIAENG
NTVPLAL-TVESPMTAENYVKEVLFVADGNPNAGVATLMFTPMSGKAEASIRIRLAQTQNVIAVAKMSDGSLFTERKTVK
VTIGGCGG
>gi|296448260|ref|ZP_06890155.1/5-150
TRRHSFIIAAAMGLGALA-------PRAARAA----------AETGIDDMIAKIAKG--RRPGRSA--VTLDLPEIAENG
NSVPITV-KVTSPMTEQLYVARIVIIAEANPTPTAATFSLTPLSGRAEVSTRIRLAQTQTVSAIAEMSDGSIEMDKKTVK
VTAGGCGG
>gi|154245468|ref/12-157
TRRRALQLAGIAALAAVLA------PRMSFAT-----------EAQVAEEMKKLFGG--KAMGEGK--IKLDVPEIAENG
LVVPINI-DVDSPMTEADFVKSVHVFADGNPLPQVVTYTFTPDSGKASASARMRLAQTQNVIAVAEMSSGALFSARSQVK
VTIGGCGG
>gi|300022234|ref/9-153
SRRAFIKLAAGGALVLASGL-----PSLASSA-------------DVDALIQKFSGG--KKPSEGR--ITLDLPSIAENG
LVVPLNF-EVQSPMTADDYVKSVHLFAEANPNVQLADFSFTPLVPKAAAQLRIRLAQTQNVTVLAVMSNGDAYVAKKEVK
VTIGGCGG
>gi|188996459|ref/2-155
NRRELLKGAALAVSSLTFGSSL---LSNVFAVELAD---APPPKKPYEEALKEITGG--KTVADSDK-VKLIAPEIAENG
AVVPVTV-EVELPI---EQIKAIHILADKNHNARTMSVEFTPANGKAYISTRIRLAESMNVVAIAQLADGSFIKAQKPVK
VTIGGCG-
>gi|225851419|ref/2-152
NRRNFLKMVAVSGVAVAA-------SPVVFSDSHRAY--ADPKKRSFEDALKEITKG--KTPVESEK-VKLIAPSIAENG
AVVPVKV-EVKDSI---ENVKAIHILAEKNFDPWSVSIHLTPANGKPYFATRIRLAKTMNVYAVAEMSDGSFIMAKKPVK
VTIGGCG-
>gi|313681575|ref/2-156
ERRSFLKGFGAAAACAIAL------PHVASAAEEKKS--GGPNEMNFETAVAAITGG--KALTPSAK-VKMEAPEIAENG
AVVPVKV-TVDSPMSAKEYVKAIHILASKNGNVRCANIYLTPANGEAYFGTRIKLGGTQDVVAIAEMSDGTFLSAKQNVK
VTIGGCG-
>gi|78776462|ref|YP_392777.1|/2-155
KRRDFLKNLSLSAATVAVI------PTMSFAADDKP---KASNALAYKDALAAITGG--KTPEPSEK-VSLKVPEIAENG
AVVPVTV-EIDYPMTDSDYVKAIHIFAAKNGNSRCIDAHLSPANGKAMLSTRVKLGETQEVIALAELSNGNFLIASQSVK
VTIGGCG-
>gi|307720913|ref/2-155
QRRDFFKKLGTAAAVTAVI------PAMSFADDAKP---VSPNKMDFQTAVNAITGG--KTPKPSKK-VKLKVPEIAENG
AVVPVTV-EVDSPMTQSNYVKAIHILSGKNSNARCIDVFLTPANGKAMFATRIKLGGTQNVTALVELSDGEFLTASQSVK
VTIGGCG-
>gi|152991570|ref/2-156
ERRSFLKGLGAVPAIGLVGV-----SSVNLLADAKKSKPKGKNAISFKKALSVITDG--KGAKESAK-VKLTVPEIAENG
AVVPVKV-SVDEPI---ENVKSIHILSTKNSNARCADVFLSPRNGKAYFATRIKLSGTQEVVAVAVLKNGSAIMAKKPVK
VTIGGCG-
>gi|291297226|ref/2-153
DRRTFLKASAGAVAGTVLANQ----LTSALAQGGL----EGEDIANLEKGLQQVLGKSFKDLTPSQQ-VKLVAPTIAESG
ANVPVEI-EASLPA---DQVKAIHCFSDKNANPLL--FTVVLNGVLPYYATRVRVAETAPVRAVVETKDGRLLMASQSVR
VTVGGCG-
>gi|297567800|ref/2-151
DRRRFLKAAGVLAGALMA-------PRLAVAQGGGL---EGEDIAHLEPTLQKVLGKGFKDLTPSGQ-VKLTMPTIAESG
ANVPFEI-EVALPK---DQVRAIHLFVDKNPSPHIVKLEV--GQAMPYYASRTRMAETSAVRAVVETQDGKLLLASASTR
VTVGGCG-
>gi|46199358|ref|YP_005025.1|/4-152
DRRTFLKATGAALGALALSGL----PARAQGL-------EGEDLEHLEQALKEVFGKGFKDLTPSDA-VKLNMPAIAESG
ANVPAEV-EVALPK---EQVKAIHLFADKNPTPHILAFM--PMKAEPYYATRVRLAETTAIRAVVETQDGKLLLASASTR
VTVGGCG-
>gi|288818817|ref/2-148
DRRRFLQLSTVSILSLTFA------PGLLK---------QSFGASKLDEELQKRLGVSLSQIKESPE-VKLQAPTIAESG
ANVPVSV-ESDIPV---DKVDSVWIFVDNNPVPWITDIKLSPMNGRVYFATRIKMGQTSNVRAILKMKDGSYLMATKEVK
VTVGGCG-
>gi|289548539|ref/2-147
DRRRFLLLGAVLTVGMLVG------PTLK----------PSFGASKLEEEVKKRVGVDLATIKESGD-VKLTVPTIAESG
ANVPVTV-ETDIPA---DKIQHLWIFVDNNPLPWILDVKVTPQNGKFWFSTRIKMGQTSNVRAIFKLADGSYVMATKEVK
VTAGGCG-
>gi|15606861|ref|NP_214241.1|/6-153
TRRDFLKVAGVAALGLTLGIS----PVLN----------PSFAKISLEEALKKHLGVGLSQIKESNE-IKVKAPSIAESG
ANVPIQI-SATVPI---EKVEALYIFVDKNPNPYIAHVEFTPMNGEVFFATRIKMGATSPVRAILKLKDGSYLMAYKEVK
VTVGGCG-
>gi|163781715|ref|ZP_02176715.1/3-153
TRRDLFKVAGVGAVAVVAA------PGMVRESFG-----AKPKKISIDDSLKEHLGTGLSGLKESNL-INIKAPTIAESG
ANVPVQV-SANIPI---DQVEALYIFADANFNPWVATVELTPMNGEVFFATRIKLAKTSPVRAVIKMKDGSLLAAAKEVK
VTVGGCG-
>gi|254516194|ref|ZP_05128254.1/6-150
TRRRFSQAILAFAALATV-------PLRVFARND-----EAFKAVNTDEAMKALFG---DKPMTVDDSFEFKVPDIAEDG
SIVPVTV-STEMEG-----VKSISLLVDANPNPLSARFHF-MPGAVPEFKTRIKMGESSDVRAV-IETADALYVSTKNVK
VTLGGCGG
>gi|329896384|ref|ZP_08271483.1/6-154
SRRRIVQGLMAAAALVAM-------PLTAFARNS-----EAFGLGDFAKARSTMFGG--QDIADGSDGITLELPDIAESP
AKTNVKV-KVDEAK--LGALKSITFMAEVNPTPISAKFYF-SPRVEPELETFIKLAGTTMVHAI-VETDKGLYSASKEVK
ATLGGCGG