HMM Seed Alignment: TIGR04476

Download Alignment

>gi|516066152|ref/7-403
HKKPILAVFAILLLFAINSKILVLNLNNDFLGILGSLCLFIVGGRKTN--------------------------------
--------------FRINYFLVLSILLLEFISWRLNTKSVHFLSILLFLCFVFHYFTG-KFSFIAFICLVLFSTLFSAFF
AHLTSEIKQGLCYIVYLTLKNFIPINKIEGVNFYINNAKITIDTACMGLSMFKTGLLFGAILMTLEERRLKQYYGVFQIL
SFCLLIIALNITSNYFRIVTLIFFNCTQENFLHHAIGLICFTVYQIVPMLFIIKYI------KPKIKNNDANKIKPKILI
VLASFTVL-----LATSIKIKNETETNFHQEVSSEYHT---------KKGSWVNKEVFKIETAEKLTYIK---------T
PSHNPMVCWTGSGYKIIESKKVLINKEEIWFNKMEK-DNQNYTSYWWY-----------------ESNGKKYSSLIEVLL
IKLIYGQPIFL
>gi|347536990|ref/8-402
FKNATLILLFTLVCINYYTIKKC--FNTDFYGILLSMTLFVWGSQKTS--------------------------------
--------------FKIAYLLLPCLAILEFIAFKLHTKALHLLALMLLLCLVYYYITS-QFSFVALINLLLFSTIFNAFF
ENFTVEIKQFLCKIVYESLKHFLNIQRIEGVNFFINQTKVSVDTACMGLSMFKMGFLAASFLLIIQEKKLQKQFDCSSII
TFCLLAFILNIISNYFRIIVLLLLNCTTNNPLHHALGLLCFVIYQLLPMLYLIRFF------VPKKQHPVLQPMRFPITT
IVIVLVVF-----FITSLAVQIETKANILTNLDTQYPI---------SKGIWINNEVFKIATPNKLIYIK---------T
PIHKPLICWTGDGYKIIKSEEKQVGQQKIWCNIMEK-NNKRYQSLWWY-----------------ECGNQKTDSFLKVMT
YKLFTNQPVRL
>gi|516343014|ref/19-425
AMLPVLAMGLVMILFFFLHKPTYI-LHQDTFFWLGLLLLPFSLQWKKQ--------------------------------
--------------KGGRRFFWLALLCGL-LSIPFTTTFGVYCMLVFALLFLLEQWRA-KLSILLPIHLLLLSPVFPYIS
RLISFPIRLGLSEAAGDILALAGFDIQISGNLIQLNGRDFLVDSACAGLYMLRYSFLFALLMLAYFQRQ-GKSWKLPELA
GLLLLLLPLNIMGNLVRIVILIVFGIMPEHWFHEVLGLITFFIYSLLPFYFISKNLAGKEKHTVPASSPGEQKNSPGIHF
YGALVVLF-----LCFSFICWKNGAKSPRQPDTTQLPL-------TAYQTER-VREVYKLSNERALIYIKP--PVEAYN-
ADHNPLICWQGSGYEFQHISTSRLGQLEVSIAELKK-EGSTLYTMWWY-----------------DSGRQQTGSQWDWRW
QTLNTQEAFYL
>gi|522019315|ref/20-432
FPLAFILLGFVLVFFNLENFIKFEFNW-----ILGLMVLPIILHFDKS--------------------------------
--------------KTANYQLLLFVLILLGFSWVLHIRTLHISAFFLFLFFQMSLIWG-RINILPLFLLLFLSPIFTYFV
EVFGFPIRLVLSEWAVDLFNLIGLKAVAKGNIISLNGNDFSVDQSCIGLNMVTTSFVLQLGIIGYFEGKCNKKLQLLWIL
VILSLTSIFILINNLLRINVLVLFQSDPQSLSHQLFGLTGLLLYVVLPGFFFTKWIYSR-FGKAPEAGHKQGNKKSEFAK
NLMLSIGI----LLILLVFNFRQDEVFPDEGIIKTFRLQENLEVPEGFKGEILANGVAKMENAKALVYIKP--PSKFFR-
SDHNPMFCWKGSGYTFKKEQTKVIAGKEVFFAELEK-GKDILYTVWWH-----------------ENATHQTISQFDWRW
RTLKGEEGFIL
>gi|256423939|ref/19-425
WPLLIFGCYGFILFYGLH---AYH-DWFSASSILGVLVLVTVTSFKHS--------------------------------
-------------EKGGFRFFLLALLPLL-LYLLVPANTLLWTAAICGCLFLAETFFG-RINPLPLMVLGIITPLFKSVA
DVFSFPIRLVLTKWAGAALQLMGGGISVQGNMIVMNGEEFSVDPACMGLQMTVTALLCAIMIIGFYQRKYQKVLSARLVL
VALLLVMVLNIGSNLLRIIFLVWLRIMPDTVLHDVAGIMCLLVYVIAPALFLLRWM------INRYGYPEQVHRRRYILR
SALKMVLLHVSLVSVMLLAFVYKPFVVADNVAIKQAPG------IPGFAVTRLPGDIVKLQNDSLLVYIK-HIPNGYY--
SEHHPMICWKGSGYNFYRVQETPVDGHQIYTARLQQ-QKDILYTAWWY-----------------DNGLVATNSQLQWRW
DALVGAHPYSL
>gi|387789743|ref/14-416
YKRLFFYSRIVLLIVASFPVLKSY-FNTGPLFIGGILIMLYSLQPTEV--------------------------------
-------------ASKRNWWLLPLTVCFY-LSTQG-VKTFYFISCVLALGWLIENYYG-KINLLPFVALTVVSPIGDYIF
NTLTFPFRLQLTQLVTICLNTVGYPIQAGGNLITVKGATFNIDEACSGLKMLETSMLLVILILAHVCKKHHYKLSFLQLL
KWIALTLLLGLVANFFRIIFLVLFHIGPEHPFHYTAGIICLLCYCVLPLILLINKY-----CKGKQVNPVTPFASHHSTS
FHVFSLIL---VCIVAFAGYFVRTKTYLVNPTVSV----------SGFKSENLTHGIVKLSNDQSLIYLK---PLRNFYS
TDHNPSICWKGSGYKMDFFTVKTIDDKKIYFGELTN-KKDKLYTAWWY-----------------QSNVHFTIDQLEWRK
RCLINDESFWL
>gi|495521111|ref/13-412
YLTAMICSGYMVICIVLLP--GYL-IW-DTPFLIGMMMLPFMLQIEKG--------------------------------
--------------TLSNRFLLPALLFSV-LAIAVPVRSTLFFMLLLTTLLLFENLVG-KLSLAVLLTMVIISPIFKFFS
DTLSFPLRLWLSNVVAETMTFAGMPAVASGNIIILKGYQFYIDQACAGLNMLHLSLLISIFIAAHYQKKAGRTLSMIQLI
TMISITILLNVISNYFRIVLIVLFKIMPGQVLHDAAGLLCLCIYVILPLILLTKPITTR-LQSRPLTLQTKPKISPSVVF
LHIGFLIS--------MSYLAFQPKNNNHTTDGQQLTL-------SGFRKSK-VGDVIKLQSDEALIYLK---PTPFYA-
PEHNPMICWKGSGYEFSFIRKQNINGITVYTGTLQK-GKEKIYSSWWF-----------------DNGSLKTINQLSWRW
HSGLSNSSFYL
>gi|510822998|ref/11-412
PAIAGYLLSLLYFMLIIGAMNSYY-LWNANLFI-GLLLAPYICSFNMG--------------------------------
--------------KFSIRYLIPAVVFIV-LALFIPVRTTVFIALLFSFLFFLENYIG-TTSSMLLFLLLLISPIFNYLS
NVIGFPIRLYLSDFAAIILGWAGSHTQAYGNIIVQGNNEFAVDQACAGLNMLATSLIICLFIIAYYQKRTNKRFSFVRIL
TLLVITTGLNMICNLIRIVLLVQFKIPAESIYHDLIGILCLLVYVMIPLMLLIKRA------SGIAVEKHLINIKPFVIR
YPILHLLL---LTTALFVALNLKRMDQIAPSIQSINLE--------GYQKNVLSNGILKFENHEGLVYLK---SGAFYA-
ADHDPMVCWRGSGYTFKSIKKTIIGSIVVYTGILEK-GGDKIYSSWWF-----------------DNGKIKTINQFNWRW
RAAKGERNFYL
>gi|523636867|ref/9-466
FLVGILVLVCVIPMFQVGKDLLSL---KSVFELYPILFLPLFVRFESGRENSNRNPSFKETQDVANIIKIESVAQGSEIL
EPSRTKRFRFEINFRKRIGWLLPGTIFVI-SGIFFQRLSLVWIGS-FWNALAVLYLSGIAFVWPAPFLVFAIPPITGFGS
LFLGYKLRLIVTELCVQLIRFIDSSALAVGNQIFFHERWFAVDRVCEGMKMGLASILIAAAFISRANRI--------GAI
LISSLVLPLWFFSNLFRVCVLILFQIPAGTWRHELIGIVLFICGIVVPLAFISLLFPNS--KQNEFNFSNLILRSPPKIL
WLILPLST---AISLAPINRFIPVKPYIWPSKIDTFHL--------DANSTLSDHRIAVYRSKENYLILKR--DLFAIG-
TGHDPRICFEAVGFSFAEQGERN----GLKRAELKSPSGEKPILLWWYSITEKSKLDETELSRLTEFAPRRAASDLEWRW
KRLLGADVIQW
>gi|529322659|gb|EQA54802.1|/19-436
FSIGILSILCLIPMIRVGQDLLSA---RSVFELYPILFLPLLIRSRTE--------------------------------
-------DETISNFKKTILTFLPGTLFVI-FGIVFQRLSLVWIGS-FWNLLCVFHLGGIRFAWPAPFLIFAIPPITGFGS
LFIGYKLRLIVTQIAVHFIQLVEKGSIAVGNQILFHGEWFLVDRVCEGMKMGLASILIAAAFALRSDRR--------GAI
LIGMIALPLWFFSNLCRICLLVLFQIPAATWRHEFVGVVLFICGVVIPLAILSLIFPNS--DPKEFNFSNIVLRSPSKIL
WSILPLLT----IGFLFSNRLIPINTRSWPSQIHSFRL--------DSESTLKDPRIAVYRSGENYLILKR--ELFAIG-
TGHDPRICFEAVGFSFTEQG----GDNGINRGQLKSPSGANPILLWWFSITENNTLDETGLANIENHTPRRSTSELDWRW
KRFLGADVIQW