HMM Seed Alignment: TIGR04399

Download Alignment

>gi|299537638|ref|ZP_07050930.1/6-298
FFKKSDKV-----VQENTIDSKDLLGNTTKNTGDNREVETKLSFHPEWD-VPQEQKYIFNFLANELEPLKPNQLSLSSIS
IE-EGRGGKWLVRAFFRSSLPQAIELGEIELFIMDKNDELVASKKFDFKALGTIPAESARPWVFEFEKSTIKVD-EVPED
GWKIAFNL-VSLRGHQLELDPSWEKQLPAEQKEELEKIVKTLPKLGETEVNFTGLQAKLADNGNLNVSIFIRNGHNKAIN
LEQLPLEIVDATGKQIAKGSFKMDPILTVQPNSTKPWTFIFPAELVDAKEADLSRWTARVTQ
>gi|340355382|ref|ZP_08678069.1/6-298
LFKKTEKT-----GLDSTVESNEILENAQSSSGNE-DIETALSLHPQWN-LTQEQEYVFRFLANELEPLKPNQISLSGID
IDLEPANGSWLVKAFFRSSLDQAITVGSIELLLIDEEGNTAASAEFDLNELGEIPARSARPWVFVFEKNDQLAE-ELPTE
NWKLAFNV-HSMMPHQLELAPSWEEQLPAEQKEALAEVVAGLPKLKPREVNIAGFQIQKQEDGNIAASVFVRNGHSKQIN
IEKLPLELIDATGELVARGTFELNPALSVKANSTTPWTFIYPTELIKKDEPDFSRWTIRVPQ
>gi|239828357|ref|YP_002950981./4-290
FFKKKKKS-----GGDTAVSAQDVIQET-DGAGGE-DVHTELSLHPSWN-LSLEQQYVLRFLNNELSPLKPNQISLSGIS
LR-R-EADGVIVSAFVRHSLSKPIKIGKTTLLLLSADDAIIARKEFDLEEMGELPAKSSRPWHFLFENATLKTD-DIPSE
GWKLAFEL---KPKHRLELEESWEKALPEEEKEKLRQLVDQLEPPKSGEVNFFGLQAKLTEEHGLHITVLIRNGSDRNIY
LEQLPLQVEDATGEVIARGGFVLDR-LEVKANTTKPWTFIFPKELIQKSEPDLSKWKISIVE
>gi|336233800|ref|YP_004586416./4-295
FFKKQKQQKD---EHDSVVEANELLENSEADSDEE-EVKTELSFHPSWN-VSIEERYYYQFLHNQQRPLKKNQISLSGID
LK-Q-VPRGYVVTAFVRNSLSRPVAFTPAPLLLLGPNNEVLARKVFDLSELGEIPPCCSRPWKFLFEQETLRTS-ELPLV
DWKLAFEL-PKQKHHSLDLAESWEKSLAAEDKQKLQALVQSLQPPKPGEVNFMGLQAQQTEQGDLHVTLLIRNGSDKNIH
IEQLALQVHDASGDIVASGAFSLDH-FEVKANTSKPWTFIFPKSLVTKENPDLRSWKVSLPS
>gi|212640458|ref|YP_002316978./22-306
FFKKKKQ------GEDSTVQAEQLFDGA-SEQQDE-DVHTTLSIHPLMS-LTTEQKYYFQYVNNELPPLKKNQVSLSGIE
WK-K-DGDRYIVTAFVRNALDKAIRFDHMPLLFIGPDGKVIGRKIFPMNELGDILPKSSRPWRFVFTTNDLYTE-DIPET
GWKLAFEL---QKPHQLDLEESWQRHLKEEDKQKLEQLVRSLTPPKQEEVNVMGLQALINNEGNLVVTLLIRNGSNKNIT
FEQLPLVIEDASGEVVARGAFTLN--LEVKANTSKPWTFIFPKSLLQKDECDFSTWRVYIPQ
>gi|288554180|ref|YP_003426115./4-300
FFNKNKDNKPKLEGKESAVSTEELLNETSEESADE-SISTALSIHPAWN-VAKEDQYAFQFLNMELEDLKPNQLSLSGIS
LM-QVEEDQFRASAFIRSSLDKAIQLQEVTLVLLDEKDQVLGRKAFDLSEVGEIPARSSRPWHFFFTTKDLFTT-DLPAS
GWKLAFQLNPSARKHSLELADSWKKSLAKESKQKLEEMVENLEPPKKGEVNFMGLQAKKQETGDLHITMLVRNGSEKTIN
LEQIPLNVEDATGEVVATGGFKLED-FKVSANTSKPWTFIFPKSMVKKDTPDLSKWKAYPPN
>gi|152974533|ref|YP_001374050./4-292
FLKRAKKK-----GKDSAVSSDQLFGQKEATPQNK-TVKPVLYFHPSWGEVAQEQKYIYQFLHKELPRLQENQISLSGIE
IE-K-REGSYAVAAFIRSSISKPISFEEVTLLLLNKEDELCARKTFNLSDIGDIPANVNMPWVFTFDEETITDA-ELSQT
DWQLAFEL---EGEHRLDLDPTWETQLSPQGKEALRNFVESLTPPQNGELNFLGLQAAQKENGDLHATILIRNGCKRNIQ
LKQLPLHIEDASGEIVVKGAFTLPN-LEIKANSTKPWSFIFPVSFVLKKEMDLSTWKAIVPQ
>gi|49476954|ref|YP_035127.1|/7-295
FLKKARKK-----GRDSVISSSQLLGTEENSNNTK-NVKPNLYFHPSWNEVSQEQKYIYQFLHKSLPTLQENQISLAGIE
SK-K-HENAYYITTFIRSSVKHPIQFETLTLSLLNKNGETCARQTFDLSHLEGIPSNVNMPWTFVFEENSITEA-TLSNE
DWQLVFEL---QGKHSLDLDPIWQEKLPESAIMKLQEIIANLDPPEEDEINFRGLNAVVEENGDLNATILIRNGYNKNIT
LEQLPLHISDRSESTVAERIFVLKD-FQIKANSTKPWTFTFPADSVSKEPIDLSKWKAFIPQ
>gi|345020980|ref|ZP_08784593.1/4-293
FKKGKGSK-----NDPNAIDASEVLSSPGDVTSDE-ELETTLSIPDGWN-VTDEERYVFAFHNSQAPKLNINQISIYGME
FS-KLADGRILTTGLIRSTVTQSIKFGPTTILLLDGDKELIAKKEFDLSKLDSIPPNAARPWKFVFNKEDIVKEVNAQPE
EWLLAFEI---KQKHVLDLDESWEKSIAEDVKTTLAQIVENAAPLKPGEVNFMGINAQRNENNDLVVTLLIRNGAEKGIA
LQQLPLGVKDASGEEITRGAFKLDD-LTIKANTSKPWTFIFPANSITKEEIDLSRWQVYPIQ
>gi|297531409|ref|YP_003672684./2-282
IFRRKQRT-----QPEAELPAQHV------EQPEG-GTKTTLSFHPDWQ-LSPEETYVYRFYHEQLPPLQPNQISISGVK
LV-E-YNDGFVAVAILRNTLPKPVRFERIRLLLLDEDGTAIARKEFDMSAFGELPPMTARPWRFLFAAEDKLVD-QLPQD
GWKIAFEL---TPRHRLDLEESWEQALSAKQHQQLQALVDSVPPPAPGEVNFMGIEAKQLPSGELAVTLLIRNGSDKHIH
FEQIPLEVRDHAGDMVARGLFPCH--LEVKAHTSKPWTFLFPPELLHKAEPDWTSWKVTIPS