HMM Seed Alignment: TIGR04390

Download Alignment

>gi|305666836|ref/173-413
NNIAITNAYEVFDIA--YD-PMIYTSVE-YKRETKLG--SIIPRINYSNRFKI---NGIQYEL-DAYPKFS-EKIYGYLN
YGFS-DSP--IYPNHRAGAELYVNLPKS------IEVSAGTRYMNFNE----KQVNIFTGSLGIY--KGN--YYFSARP-
YITPSKGRPLGISGTLTGRKYLKDGENYFGIIAGYGFASDLKQLRDGDQVLAETLLF-IESQHVRFEYQFSGKKQPHLYR
ANVG---VARQELAYDSGNFYWSLTAGFVYHIKF
>gi|260062912|ref/148-388
NSISLENQLQVFDNT--FD-PMVYATLE-YERQTPVG--KVIPRINYSNRFNT---HGVQYEL-DLYPRVS-KTFYAYLN
YGYS-AAP--TYPVHRAGVELFANLPSA------MEVSLGGRHLDFRE----TSVRLITGSFGLY--RGN--YYLNFRP-
FVSVFRDRDPGFSGSILARRYLDHATHYLGLRAVYGFNPELQQLRSGDQLLAESLFF-VESQQVQLEYQFTGASRRNRYR
AQLG---LARQELVLEPGSFFLAIQAGLRYQAGF
>gi|254494917|ref|ZP_01052475.2/187-425
IGISVSTDYYDFEGD--NGRANMYYSSFSYARQTKFG--SINARINYSNRFET---DNYQLEI-DLYPRIA-KGLYAYVS
GAFS-NSP--LNPTQRYGFELFKSLPKS------FEASLGFRWLKFST-----ETIIYTGSVGWY--TGN--SYWAFRT-
YVTPGEP-GTSKSGRLIYRKYTSDADNYWTIEAGFGASPALDRFAPG--FSGDEIFQ-LDSQALVLGYYFS--TKNKKNL
WGFNASMFRE-EKPFSKGDYFLYPTLGVSYAIRF
>gi|344204196|ref/204-437
NQIGLSYDFVYFDKR--FDQPWHLASLD-YTRQTKLG--SVASRLNYANRFGS---GTTQFEM-DMYPRIS-NTFYAYVS
GGVSNDRG--IFPKYRAGFSLYSNLPGA------FEADAGFRWLYFSN-----STWIYTFSVGKY--YKN--YWFNFRT-
YLTPSDA-GFSNSYGLTIRYYFGGADDYLGLKLGTGFSPDDTANN----VFIDSSTQ-LTSTNVALGYRKLL-AKTHIIY
AELT---YEN--IEYAPDSRGNQYTLGIGYIKRF
>gi|325103341|ref/199-432
NTIGVSYNFVHFDKQ--FDDNWHIVSAS-YKRATSIG--SVIFKTNYANKFAS---NGLQFEL-EAYPRLS-KMFYLYVG
TGYSNDVG--IFPKYRTGVSVYANLPHS------FEGEVGYRQLYFSN-----SIWMYTASVGKY--YQD--FWFNMRT-
YLTPGSE-SISQSYAATVRYYTKGANDYLSFVIGSGLSPEENRSN----LLDNSPYK-LKTFKVGAEYNFSI-NKTNLFS
LSST---YYN--QEFRPKERGNQLDIILGYSKTF
>gi|311746991|ref|ZP_07720776.1/180-408
NAVGLTYDNDYFFGD--IA-PWNTFSLYGRTRTNLTG--SLIARVTQSSRFDS---KGTLFEI-DAYPSLG-ENAYAYVN
IGGS-GAS--FFPKLRFGTSIYYSLPKA------WEVEGGYRYLGFS-----EVTHIFTASVGKY--VGN--WWLNLRA-
NVIPDEG-SVSTSANFQARYYFKTAEDYFSLQLSSGVSPDE--------ENRDQTQL-LNSYRARIGYQQLL-TSRFMIY
AYTG---YSR--DELSATNIRNDLNFTLGVEYRF
>gi|146301661|ref/173-404
TKNAVSASYLNISTSNPGQAPMHYGYVEYAHKFSKS---ALVGRANIGHIEND---TQALFEA-DYYQTFS-KKDYLYVN
AGVSTGET--IFPVAKVGAEYYFRPQKR------FDYALGARFMHFET----DDVTLLTGQISYK--MGT--NTIAYRP-
YYDTGNE---LFSHVLSFQHTNEEKERVVRFELQYGNVPYLY-------LYSNFTQP-LKAYRAGVQYQHRF-GDSFFVR
PIFL---YEY--EEYLPGEYRNRFNAQIIITKRF
>gi|339327058|ref/47-279
GFIEGGLGHANLTGD--NA-SWNDQYLRGGVNFTPKD--YVTGEISHQNHFGD---QGTFFGL-GYTRTFD-ENWYGFLS
AGTSAGGF--FLPQFRTDGMLFRKLLEKKN----LVVSAGFTYYRAKE---VYTDKTLLLGLTYY--FDAP-WIVQLGA-
RLNRSDP-GNIRSNRGIVAVTYGRDKDQY-ITLKYDGGSEAYQLT----GAQTLLSD-FNSHEVSLTWRKWF-TKRYGIN
LRAI---YYD-------NPSYTRKQAEVGVFAEF
>gi|121603203|ref|YP_980532.1|/45-276
RSLELTMGSQSLNAG--YS-NWRDVTLRGTYAQPRN---VLQGEVSVTRRFDE---DGAFLGV-SDTYTFN-DDWFGSVA
VGAGDGAF--YLPRYRVDAALYKKWLADRS----LVTSVGAGYYNAPD---GHTDRSLSLGAAYY--FTSP-WIVEGGV-
RLNRSSP-GSVHTQQKYAAVTYGRDKQDL-VSARYTWGGEGYLAI----AANTQLVN-FKSEEASVAWRHWL-NSKTGLL
ISAN---RYT-------NPSYHRSGINIGIFHDF
>gi|329902878|ref|ZP_08273288.1/24-255
RAVEVTTGTQQLTGG--FS-SWRHLTVRGVLEQGNH---LLQGELSSKREYDT---GGTFAGL-TDTITLD-DRWFASAS
LGLGDGAF--YLPRYRVDGFLYKKWLPEKN----FISSIGLGYYDAPD---GHVDRSLSLGGAWY--FEQP-LVLEVGV-
RFNRSSP-GAVITRQQFIATSYTPDPSNA-LSARVAWGNEGYLPL----TPDTSLVN-FNSQEASLAWRRRI-NQNWGAS
ISIN---HYR-------NPTYERSGIDIGLSRHF
>gi|167573881|ref|ZP_02366755.1/101-332
TELSLAYSTAHLTHG--YG-NWYGVHLRGLYQ-AGGR--TVIGELSQLHRFGE---TTQLGAI-TYVQDMG-PDWFGGIG
FAGTTSGT--ILPSARVDLSINRKLLSNRS----LVLSAGAGYAWNRN---GHRDQLYHLGAIWY-ALPK--WIFEAGW-
NYTVDSP-GSVKAPAYYGAVTYGEVGKSV-IVLRGGFGREAYQAI----GNNAQITD-FRSHEMSLKWRYWI-TRKWGTQ
VEFD---YYH-------NPFYSRIGGEVGVFYRW
>gi|340788847|ref/128-358
AALELVGGDGRMSNG--YG-HARLMSLRGMAVTSLG---VVQGELTQQSRFGF---SGNYGNV-SLTHDLS-EDYYTTIG
VGVG-NSP--LFSSWRTDAAAYRKFGSERQ----YVAGIGGYYAKGNE-SARSDKGLLFTGIAYF--SG---LVVEGGV-
RLNWADP-GAILGPSQYIAATFGNDDRRA-IIVRYEHAKETYKVL----PGGPELVN-FKSETASIQWRQRI-SRDSMLL
AALE---YYQ-------SPVYDRLSFSLGWRWSF
>gi|288817588|ref/22-258
FRLEVGAGYEYLSPHRIYG-DWKSGFLRFYHRPSNDL--TYFLEADAFSRKNL---GEAALGAFGLYKDWS-PWLYTYSS
LSAGSSSS--YLPKFRLDHEFNLKLGPQKN----IVPSVGFTYIKYHD---VHKDYIMYPGITYY--GEG--FVITYKH-
FFNKSQP-GSVSSSTDLISLGIGQEGKSW-TYLDMYYGKQAYLATY---LTSPEEVR-QKSLYISLKHILWI-RKDFALF
GGVS---YFK------LKDGYEKYGFQAGFFKDF
>gi|226226267|ref/55-289
WHLQLSTFHSSADNG--YG-VWQGQDARLLYSSTRL---SPFVSVGTQSRPNG---RQQVFGA-GSYINIA-PWIYAIVG
VGGAPDNGTVLFPKIRSDASVFVAVPKLKG----VLVSTGFTDLRYTD--KRAGGHIVSLGSMVY--RGR--GIYNAAV-
FLNEDRA-SGARSSAWQAGGQWGTQGKFW-VGGGVGSGNEAYRLL----STTPFDAR-FKSQFVTAFASKWI-TTSTGVS
VRLD---YER------KVDVFNRRAIGLTYFIDF
>gi|268317910|ref/25-249
WGLTTFYTYEALNEQ--HP-AWHVGYLGLQRRFARQ---TLIADVTTHRRFNR---NDVALGL-EGWSDLW-SGAYGNLR
LQYTPEAR--FLPDVEAYVEVYQTVGA-------WELALSARPRFFPD----DTVPTFGLALARY--EGN--WYLRTRT-
LLTALAG-HLNWTQTFMARRYRQPPLDFIDLQAGFGRGVEIV-------DVGPVLQA-VRTYFVAARVQRFV-TRTLGLS
VGLS---YSN-------DDLFTRRGLSLGLLHRW
>gi|83815209|ref|YP_444401.1|/41-267
WKAAARYDYDRVSGG--RV-DWQRWTAV-LQRSIPRG--TVAATLVRQRRFDT---ADEGITV-DLWQDLW-AGAYGHLQ
VSFGPDAQ--IRPQYSLKAEIYQPVGP-------WELLGLYEGRRYTG----SDVHQFGAGLARY--VGA--WYIRART-
TAAPRKS-TWAVSQRVGIRRFYYWTPSASYIDLEGGAGRSVELV-----GPNASLLT-ARTAFASLRVQHFL-TDGCALT
ATLR---YSD-------DGPLSRTGGALGIFVRW
>gi|86159937|ref|YP_466722.1|/20-250
STVELSQGAEALSGD--RP-AWRTSALDLAWTGDRDRALAAGGSLREASRF-----RQDDVEG-ALWAQAAVAGVVLGVE
GSASPTWE--FLPRWSAGARAERGLGAG------WIASLGGRLLRYDGELGASTVALATLGLERY--FGR--WRAAASG-
TAAGLHG-AWSGSGRLALDLYYGERAR---VGVSVAAGRELES------LGAGEVLR-TDVLGAAVTGVHPF-SARWALT
WDLT---AQR------QGELYTRVGGRLGVRRSF
>gi|337279978|ref/29-254
DRVTLQAEHSELDKG--NT-DWRELTLQLSRQWQPRE--AAELGLAQTRRFGL---DDTQLRL-GYSRPLS-QRLTGSLQ
ASASPTHR--VLPKGSLGGALQYEFSPG------WLLHGGARHTRYDA----TDVDEGRLALERY--FGD--YSLLAGW-
--TPARA-LGQDTHAFELRGSWYYAPDSS-VGVIAARGDEATQ------LGEDRIVL-AEVRSLALLGRHRL-SPQAALL
WSLG---RTR------QGSFYTRTGASLGLQFAF
>gi|338997926|ref|ZP_08636609.1/39-265
TEIEVSQRYEHLDSG--FS-SWQAQRFDAQHHTAEGV--TWYGTVLRERRYGS---WDEGIEA-GTAVPIG-QNWFVQPE
VGRSFDAD--FLPNWYADLRIQRLFPDG------WLGNASIRRTQYED----SQVDRLALGVERY--WGS--WRGAYTL-
NISDVEGASTPVGHAVALERYY-NDTSFIGLRANAGREEEG--------LPNGNVLT-SSVSGLGVRGRHWL-DANWAIA
WDLG---WLS------QGDIYNRYGVQVGVRRAF
>gi|329848263|ref|ZP_08263291.1/137-361
WQVDAGTEYSGFSGS--DQPDWNQQSVQITRRFNANRS-AAHLRLVRYSQFGL---NDGEVEL-GLAGRLG-DRVSVYAS
LAGSPDAD--FRPEGRMAAGGAVRMTKS------VWLTFDGRRDRYAA--ARVTSAAWGMRYEPH--DG---WALSSRMI
RVSPSDS-DAQTGYDLRLDGTIREGLRFY---AGLADAPE---------TVAAVTID-TRSAFAGIAWDM---TQITTLR
AGYG---RDD------RENTYVRHGFHVTVSHRF
>gi|357027695|ref|ZP_09089762.1/77-305
WRLDLGSEVSDLTDG--LG-DWTDSSAGLAYRLTPQT--TISGRTRVATRFGH---TDVQVEG-RIDQAFS-PTVSAYAL
AAATPDAD--FLARYSIGAGASWQIVAPAKAFGPFSLNIDTRYDDFAN----ADITTISPWVQAYVLDGR--LGLSARW-
-VHAADD-IGTQADGYVLRADLAVTQRFN-VFGGYADAPE---------ISDGTLVP-TRTVFGGVSWDV---TDPLTLR
ASLA---HEQ-------RPTFDRTIFGLGLTTRF
>gi|114571295|ref|YP_757975.1|/29-258
WTADLVVEHAALSRT--ALDDWSGAGLQVGYRNADAR--LTWGRAEWSRRFGT---QDVFLQA-GLQDQFA--GGVASVA
LGSAFGGD--FREDVDLRLAWTRPAWRPAQGTGGTDLDLTARFADYGD----GVVTVLAPGLVHY-LAGHDAWLSVSPI-
FVRAS---GGDWESGLALRGDTALGAN-WRIRSGLSLAPD---------IEAGRVAR-TRSVEFGVRRAF---GPDREIG
WTVS---QVD------RSGSYARTGIALSLRQRF
>gi|91211255|ref|YP_541241.1|/38-273
TSITAGYDFTDYSGE--HG-NRNLAYAELVAKVENAT--LLFNLSQGRRDYETEHFNATRGQG-AVWYKWN-NWLTTRTG
IAFADNTP--VFARQDFRQDINLALLPK------TLFTTGYRYTKYYD---DVEVNAWQGGVSLY--TGP--VITSYRYT
HYDSSDA-GSSYSNMISVRLKDPRGAGYTQLWLSRGTGAYTY-------DWTPETRY-GSMKSISLQRIQPL-TEQLNLG
LTAGKVWFNT------PTDDYNGLQLAAHLIWKF
>gi|190572292|ref/25-261
DRVTVQLDHADYSDG--FG-KRDVQTVDVAGRSGGSR--WHLGLAHGERDYGSRRFSGNRMQG-SLHHRWS-PRLSTRTA
VTASNDDP--VFVNRQVNQDIQWKVTPQ------TVLSVGGKYAQYHA---GAHVSGWSVGASHY--FPR--VTASLRHE
RHRQSNG-PDGHGTTLSLRLKDGQGRGSTQLWLGSGTSGYTA-------ESDPLLLREHDARRAFLRRSQPL-GEHLVLD
VGIGKTWHRT------RLDSFQSVQSHLGLGYHW