HMM Seed Alignment: TIGR04335
Download Alignment>gi|257094200|ref|YP_003167841./8-179
SALLVTARNAIGERFGL-ARQVVDAL-----PELAE-PAATFVTLTQQ----GQLRGCIGSLEAYR-PLATDVAENAVAA
AFRDHRFAPLGQDELPRTRVEVSLLTPAEPFPVLSEADALARLRPGIDGLIFSY-G-RRRATFLPQVWESLP-EPRQFLV
QLKL-KAGLPGDFWHDQ-VVLARYGVRKW
>gi|89093258|ref|ZP_01166208.1|/12-185
QYLLTVARKAIQRSVSG-LSNCDFLPEH---DVLSL-PGASFVTLTVS----GRLRGCIGSLEAQQ-PLFMDVWHNAQRA
AQNDPRFPLVLESELDQIKIEISVLGELQPIDVSSEEELLTRIRPDIDGLLIDD-G-VHRATFLPSVWQQLP-DPTTFLA
HLKV-KAGLAQSGWPEG-IRCAVYQVEKW
>gi|350556942|ref|ZP_08925943.1/27-202
RILLEVAARSIANGLER-GMPLDLDPADYP-EPLRA-TRATFVTLEFD----GALRGCIGVLDAFR-PLVEDVAHNAFAA
AFQDPRFPRLRPDEFPRLTIKISILAPPEPLEFASQADLLGLIRPGVDGLILTD-Q-GRRGTFLPSVWEQLP-DPASFLE
HLKL-KAGLPPGYWSET-LRVFRYTTESF
>gi|350561284|ref|ZP_08930123.1/19-194
ARLLDIAVFGVRQAAAV-QALPCVDPSREP-PALRR-PGATFVTLRRA----GRLRGCIGTLEATR-PLIEDVAYNAFAA
ARHDPRFPPLTTNEIAGLELSIAALGQQEPLAPTSRTALLETLRAGVDGLVVRS-G-LRRATFLPAVWEQLP-EPGDFVD
ALWE-KAGLPSATWPDD-LRLSRYRVHTL
>gi|121998651|ref|YP_001003438./19-193
ALLPRFARQNIAHQHEV-GEPLPIAS-GLP-ESLTR-PGAAFVSLHHD----DGLRGCMGTLLPKR-PLVNSVMDSALDA
AFNDPRFEAVGRDELNALTVKVAVLGPARPLEVSDEQQLLAELVPGEDGLILHD-G-LRRATFLPAVWEALP-EPQDFLI
QLKL-KAGLPPDHWSEN-IQFARYRSVTF
>gi|254489954|ref|ZP_05103149.1/16-191
FLLKKIARDAIHYGLAN-DTPMPLDTGCLP-TSVLE-KQASFVTLFIA----GALRGCIGSLTAVY-PLAEDVAKNAYAA
AFRDHRFETIAEPSVADLEIHISVLSEPQIIPCNSEYSLLEQLHPGRDGLIIED-G-QYRATFLPAVWDAIP-SPERFVH
ELKR-KAGLDKDYWSAT-LLCYRYHTETF
>gi|320159855|ref|YP_004173079./12-189
RLLLQLARRSIEAAVNG-KPLPEIRAEDYP-ARLFE-PGVCFVTLTDAR---GELRGCVGALEAYQ-PLVEDVREHAVAA
ALEDYRFPPVRPHEVDHLKIEISRLTPPRPLPYENPEDLPRLLRPHVDGVILRD-G-IRRATFLPQVWEKIP-NPEEFLS
HLCQ-KMGAPASLWRKKKLDVYTYEVEEF
>gi|320352412|ref|YP_004193751./8-186
QVLVRLARQEIERHLGM-TPSRPVTTEELRDPALQE-RRGVFVTLHKR----GDLRGCIGSLAAAE-SIVDGTRRNALNA
AFHDYRFEPLTTAELPALHVEVSVLTEPQPLAYENADDLLRLLRPGVDGVILQGPG-GASATFLPQVWQQLP-APDQFLG
HLCR-KAGLAQGAWRSGTLGVFTYQVQSF
>gi|357033811|ref|ZP_09095734.1/1-175
-MLLKMARISIAEKL---GLSVDKSQIDLNQSFLEI-KQGLFVTLHKN----GALRGCIGVIEAVE-PLKTGVAETARLA
AFKDSRFAPLARDEFDQVDLEISLLSPPEKFEYSKAKELIQRLVPFKDGVIIKK-G-SSQATFLPQVWEQLP-DTASFLS
QLCT-KAGLDADEWTKGSLTVHTYRVHLF
>gi|350534320|ref|ZP_08913261.1/15-190
TQLFNIACDAIRCRFAG-QPATPPSLGECL-PRLRE-VGASFVTLKVH----GELQGCIGTIVAHQ-PLALDVHDKALAS
AFQDPRFTPLSKKQLSSLSVEVSVLLLPEVLVVASEQALLGYLATHKVGLILSC-R-QRRALFLPQVWEQLP-NPIDFVR
HLKH-KAGWSESFWDDE-MEVKTFVVDSI
>gi|54308443|ref|YP_129463.1|/17-192
TQLLDIAREAIRGHLST-GVIKTPQLDLYH-KKLLA-PSACFVTLEVN----GQLQGCLGSTVAYS-PLVLEVHNKARAS
AYEDRRFMPLTEDQLDDLTIEISVLSEPQIVDIESEEALIEFLSSHKVGVILSN-G-NKQALFLPQVWKQLP-KPQQFVR
QLKQ-KAGWNAAYWSPN-ITVKTFTVSRL
>gi|127511863|ref|YP_001093060./15-189
ACLLDLVWQVIDAGLTQ-GGLTLPEA-PES-EALLT-PAACFVTLHSS----GELRGCIGRVDACE-PLWLCACENAYGA
AFKDRRFAPLRSEERESLTLDISILSPLTPMVNQGEAALRSSLRPNIDGLLMDD-G-HHRALFLPSVWQSLP-DPKDFVA
ALKQ-KGGWPQDYWRDT-ITLQRFTTQVV
>gi|237808839|ref|YP_002893279./13-186
RAMLTLARNAIKAHWMP-DTDTETAAIL---PHGEL-KSGCFVTLHKH----GELRGCIGTLEQDM-PLQQSIPYFARAA
AFQDPRFPPLTAAELADCIISISVLSEREPLPATSREELMAALVPFTDGLWLSD-G-YHRATFLPAVWRQLP-DKKEFLH
HLLL-KGGWPPQNWPAQ-MKAWRYHSIEF
>gi|308050677|ref|YP_003914243./11-177
RRWLALARASIASDWHP-QPLPQLEL-GDQ-------VADLFVSLHID----GELRGCIGATNNDR-PLAQSIAYLARQC
AFADPRFPPLTEAELARCHISISVLGPKRPLPATDRTTLEAALCPG-EGLLLRQ-D-GRQAIFLPQVWEGVS-SPREFVD
ALMR-KGGW--QHWSPR-MQARSFDCLVV
>gi|157960724|ref|YP_001500758./18-194
RQLLSLARITLTKALVP-QQNLEVSQAPLD-DTLNRLKLGCFVTLTLE----GELKGCMGCIEGER-TLTELIPALASSS
AFSDRRFLPLVESQLKPLCIEISLLSQMSPIEVKDQMQLQTYLQGSSLGLVLKE-G-DRKAVFLPQVWQQLP-EAKDFIE
ALKA-KGGWGRNEWPPN-MQVEVFSVTQF
>gi|157374142|ref|YP_001472742./15-189
QRLLALARQTLVDYFAP-QQT-DIESLSDD-ALLSR-HVGCFVTLFLD----GDLSGCMGDIEGHR-PLSKSIPELALCS
AFKDNRFLPLLASQMERLTVELSVLSPLSQLKIRDEDALLRYLAEHRYGVVLSD-A-FHRSVYLPQVWEQLP-QPGEFIR
ELKR-KGGWASGHWSDD-MRVELFTVEHF
>gi|149922582|ref|ZP_01911011.1/12-185
DILLARARASVGAQLGI-GDTWEPTR--LL-PALSE-PAATFVTIELD----GHLHGCIGTLAPRR-TLAEDVEHNALAA
AFNDPRSRALLASELPRARFSVAVLDAPTLLPFRDRDHALAQLRPGVDGLIFTW-R-GRRGVFLPQVWDVLP-EPEDFLA
ELAR-KAGHERGFWHPE-VVLERFCVTKY
>gi|152993348|ref|YP_001359069./3-181
EVLIGLAKAAILVALNQ-PENFDLEGALKKYPELLE-NGAAFVTINKRAN--DQLRGCIGSLQAYR-PLYKDIIANAQAA
ALHDPRFPPMTPEELKDIKIEVSILSEPKPLQYSDIEDLRSKIVPMKDGVVLRY-D-GYQATYLPQVWEQLP-NFDAFFS
SLCM-KAGLPGDCLKHH-PDIEVYHVTKY
>gi|78778044|ref|YP_394359.1|/4-180
GIVLRVAKSAILSRFDS-SYSFDKKALEDEYPFLKE-SGASFVTLKHN----GKLRGCIGSIIAHR-TLLEDIINNAISS
AFKDPRFKALSKEELTNLNLEVSILTPPEILEYEDYEDLLKKVTPLKDGLILNY-G-SYQGTFLPQVWDELK-TQELFLE
HLSY-KAGANPSIYAYH-PTIYRYRVEAI
>gi|313682444|ref|YP_004060182./4-179
SVYIQIAKNAIQAHFDGVGVDKDRYV-SMH-PELSE-KKACFVTLTLH----GHLRGCIGSIIAHQ-SLIDDLTSNAVSA
AFRDPRFSPLSRTEYSEISLEVSLLTHPKEVVYQDQNELKQIIRPHIDGVILRL-N-NHQATFLPQVWDELS-DFDSFFA
HLGL-KAGIGSDPLPYH-PEIYTYQVDKY
>gi|332295533|ref|YP_004437456./2-167
HPYVQLAKEAVELWIKE-HKKPDKNN-KKS-PLFER-KGACFCTIYKN----KELRGCIGTIFPLHDSLYEEIIENAISA
ATRDPRFEPVRVEELDLLEYKVDVLSEIFPVKD------LGKLNPKVNGIIIKQ-G-SKQALLLPDLEGVD--TVEDQIR
IVKM-KAGI----FNDLPCDYFTFTVERF
>gi|239618065|ref|YP_002941387./6-172
SIYVEWAWHVIESYILR-NEYPGISG-NLP-EELTQRRAACFVTLHKAN---GDLRGCIGTILPTKRNLAEEIRDNAIAA
ATKDPRFPPVQPEELNNLVISVDILSEPEECK-------PEDLDPKKYGVIVEA-G-WRRGVLLPDLPGIV--TVQEQLR
IALL-KAGISPN---EP-YKIFRFSATRY
>gi|161527724|ref|YP_001581550./12-187
IELVKMARKVVIEFLKN-NSKIIDSE--FD-SKFNF-SSGVFVTINKE----NDLRGCIGYPTPVK-KLCDGLVDAAISA
ATKDPRFTPVTIDELDKITFEVTVLTPPEEIKVEEYSEYLSEIKVGRDGLIVEN-S-FSSGLLLPQVPTEYGWNEKEFLE
YTCQ-KAGLNKDAWKEKSTTILKFQGVIF
>gi|282162776|ref|YP_003355161./8-181
TLAVKTARRVIEEYVRT-NKMPNVEL---P-EAFKD-LSGVFVTLKQD----GDLRGCIGYPYPDL-PLSKALADAAVQA
ATQDPRFPRVRSAELDRISVEVTVLSEPEPLKV-KPVDRPGHLVIGRDGIIVER-G-LYRGLLLPQVPVEQGWGPEEYLE
YGCL-KAGLSPDAWVDDVTKVYTFQGQIF
>gi|327398469|ref|YP_004339338./9-185
EFLVRLAREAIEYFFKN-KEIMPLPE-EYP-EIFNQ-KRGVFVTLNSYPN--QQLRGCIGYPLAYE-PLIKGVISSALSA
AFADPRFEPLNTVELDKVTVEVTVLSPMIQLDASRPY--TEQIKVGRDGLYVVC-G-ASSGLLLPQVPVEWGWDEEAFLA
NVCH-KAGLPYTCYKDSSCTFYRFTGQIF
>gi|41615227|ref|NP_963725.1|/1-177
MNLAKIARKIVEYALE--GKDYEIPD-EIK-EKLNY-KAGAFTTIKTLD---NQLRGCMGIPYPIY-PLWQSLKYSALMA
AFEDPRFPPLQKEELDNVKFEVTVLTPPRKLIVNNPLEYLEKIKIGKHGIIIKR-G-PYSGLLLPQVPIEEGWDAKEFLS
YGCL-KAGLPMDCWLDPKTEVYVFEGQIF
>gi|332796295|ref|YP_004457795./15-194
KTLVKIARQAIMKKLGL-QSSISYKE---S-EVLNK-KGLAFVTLETLLGETTTLRGCIGYVEAVA-PLKEIVKNAAIAA
AFSDPRFPPLMKDEINNIIIEVTVLTKPEEVVVDDRKELPKVIKVGRDGLIVEK-GILYSGLLLPQVPMEYCWDEETFLA
ETCL-KAGLSPDCWLDKNVRIKRFEGIIF
>gi|302348746|ref|YP_003816384./28-207
EELVRIARKSVEYYFEN-RALMPTPQ-GLD-PLLLR-PGAAFVTIETYEGEARSLRGCIGFIEPIK-PLVRSVIEVAVEA
AFNDPRFMPMERSELDSVTFEVSILSKLEEAPR-TPEGRKAFVTIGRDGLVVER-G-FYRGLLLPEVPVENMWDVETFLS
ETCI-KAGLWPDCWYDEKVKVYRFRTAAW
>gi|297619421|ref|YP_003707526./9-185
TFAVKETRQILKNYLN--GTDYHISD--AP-KIFNE-ARGVFISLYENSK--NTLRGCIGIPEPVM-PLKDALKEAAISA
AVHDPRFTPITRDELKKIDIEVSILTHPKLLDVENPMEYIKKMNIGKHGLIIEF-G-TYRGLLLPQIAKEYNWSKKQYLS
NLCT-KAGMHPTAWLEYDVNIYSFEAQVF
>gi|48478027|ref|YP_023733.1|/18-187
RIIIDIARCAILNKF----RLPCSEP-QIN-SKLKV-RKGVFVTVNNG----SELRGCIGYPMPVL-PLHIAIKNAAIQA
AFADPRFEPLRSSEINKINLEVTILGDMKEISYYD----INTIIIGRHGIYIES-G-IYSGILLPQVAVEYNMTPIEFLR
QTCI-KAGIEPECYRRPDTRIYIYEGKII
>gi|257051639|ref|YP_003129472./16-186
KQLLEYARAVVAAVVTD-GSPPPAPD----LPVLSE-KRGTFVTLKSD----GELRGCIGRPRPDQ-PLEATLNAAATEA
ATADPRFPPVSPDELETITVSVSVLTPPEALPDID----PADIVVGRDGLIIAT-G-RQRGLLLPQVAADRDWSAEKFLQ
ETAR-KAGLSPDGWQRENTTVKRFSAQVF
>gi|281356605|ref|ZP_06243096.1/12-181
RQLLNFVRQVITSHLCN-GELPEIPA---I-PHLSE-PGACFVTLKDFS---GNLRGCIGNIEAFE-PLGENLIRNAVNA
ATEDPRFPAVDWEEFSECTLELSILTSAKPIAS------PEEFVVGRDGIILRA-A-NRGAVFLPQVAPEQHWDRETTLT
YLAR-KAGLPADAWRNADARLFTFQAEVF
>gi|303246697|ref|ZP_07332975.1/14-183
DYLKNCVKLRIAARLAG-KAAAVPQP---PTDKLRE-AYGAFVTLNLR----GRLRGCIGHIIGDR-PLFTTIADMAEAA
AFEDPRFPPLSPEEFEAVTVEISVLSPLTPCPD------PNLVEVGRHGLLMRR-G-GRSGLLLPQVPVEWGWDRETFLC
QTCS-KAGMEPGCWKDPATQIFWFEAEVF
>gi|337288293|ref|YP_004627765./8-177
KYSLKLARKTLERYFSG-DYEIEVPP-KKF-KNLWE-KRGAFVTLLKE----KHLRGCIGILEPLY-PLYETIQKMAIEA
AFKDPRFAPLEAKELPLIEIEISVLSPLKKGT-------LKEVEVGKHGIYLVK-G-AHRGVLLPQVPVEYGWDKKTFLE
HVCL-KAGLPPDCYKSPEAKIYLFTAEVF
>gi|302342194|ref|YP_003806723./11-180
KRLLAIARQTVEDA-SV-GRAPRAWP-TAP-GQPPD-ERGAFVTLHKN----GQLRGCIGNFVGDG-SLERTVSQMAVAA
ASQDPRFRPLRPDELAEIDIEVSVLSPLERIDD------PELIEVGRHGIYLIS-P-RGRGVLLPQVAVEQGWDRWTFLD
HTCL-KAGLNPGCWREPEVNIFIFSADIF
>gi|291287898|ref|YP_003504714./11-178
ALLLKTARESIRSYQQ--GAAYEPEE--IP-KELNF-ESGCFVSLNIR----GRLRGCIGNFRSDL-NIVKNVSEMACKA
AFADPRFGPLSVDELCICNIEISILSPMVKAS-------AEEITVGRDGIYILK-G-LSRGVLLPQVAVENGWDRETFLN
QTCV-KAGLPEDAWKEADTEILSFEALVF
>gi|253701170|ref|YP_003022359./11-179
KLLLHLAREAVTSAVET-GTVSVRQV--TE-AHLQA-TKGCFVTIKRQ----GALRGCIGNFSSEK-PLYLLVQEMAASA
ATRDPRFYPMKEEDLADFELEISVISPLQKIET------PEEVVVGRHGLYLEK-N-FSRGVLLPQVAVEQGWDRETFLG
QTAL-KAGLKKEDWKEG-ADLYVFTAEIL
>gi|262197351|ref|YP_003268560./13-182
RELLRIARATLREYFHT-GRIPPGKP--HR-DSLTA-EAGAFVSLHKG----DELRGCIGTQQEST-ALFRTIQEMTIAA
ASRDPRFEPIEEDEIEELKIEISVLAEAEPVSS------AADVEIGQHGLAIEC-D-GKRGLLLPQVASKAGLDSERFLA
EVCT-KAGLPEDAWRSDGASLSKFSAQVF
>gi|94971138|ref|YP_593186.1|/19-185
ETLIRLAHAAIDSALH--DRPMDLTA---PTPHLEE-QRGAFTTLHLH----GKLRGCIGYVLPVA-SLYKTVANTAVGA
AFEDPRFERVKAPEAPELKVEISVMSLLFPIE-------PKDVEVGKHGLLISW-N-MRRGLLLPQVATERNWDAQTFLS
ETCR-KAMLPVDAWQRG-ASIEAFTAEIF
>gi|307720879|ref|YP_003892019./14-184
KALKEIAKTALYEAVIN-NQKIALDESKLP-DKFKL-HLGAFVTLKEN----GMLRGCIGRFEPDE-PLYKVIIDMAISA
SRYDTRFNPVTKEELDNIEIEISVLTPRKKVNS------IDDVVVGKHGIYVEY-G-STNGTYLPQVATDMGWDKEQFVR
SCCVEKAGIAPEHCKD--ATLYVYEAIVF