HMM Seed Alignment: TIGR04308

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>gi|307709506|ref/1914-1966
-RWI-DE-DGNVLK--PSVKTGNEKDAEHG----SIP-G--YEFV-RTVIAENEPVM-THIFRKVSG
>gi|307706159|ref/2715-2763
TIWT-DE-NGNPLK--SSES----GAKEPG----TIT-G--YEYV-TTVTDAAGTI--KHIFRKVEM
>gi|312864161|ref/2168-2216
TTWT-DE-NGNPLK--PTES----GSKEPG----TVS-G--YEYV-KTVTDPNGNI--KHIFKKVEM
>gi|329768358|ref/2837-2885
TTWT-DE-NGNPLK--PSEN----GAKGKG----TFE-G--YEFV-RTVVDEDGNV--RHIFKKSTR
>gi|256544395|ref/2008-2056
TRYV-DT-EGNQIL--ADKV----GTHDPS----TIE-G--YQFV-KTEKDEKGNT--VHIYKKIAP
>gi|256544395|ref/2062-2110
TRYV-DE-NGNQLL--PPKE----GTQNQV----NID-G--YDYI-STNKDNNGNT--IHVYKKKPT
>gi|256544395|ref/2223-2271
TKYV-DE-NGNEIA--DTQK----GKHPSK----NIE-G--YEII-TTKSDEKGNI--IYVYRKKPD
>gi|307708374|ref/1791-1839
TYYV-DE-NGKDIA--PSEK----GAQAPK----GIS-G--YEYV-TTTKDPNGNL--VHHYKKVAT
>gi|260585020|ref/2030-2078
TRFV-DE-NGKDIT--SPEE----GLKDPK----ALE-G--YVFD-KTTTDKNGTV--FHHYKKATA
>gi|322376865|ref/478-526
TEYL-DE-NGNRIT--SDKE----GKHNPI----ELE-G--YEFS-HSTTDAKGNT--LHHYKKVTN
>gi|339452608|gb/234-282
TRYQ-DG-DGKEIS--PEEN----GSHGPK----TLE-G--YEYT-GTKTDKNGNV--IHIYKKVVT
>gi|227499830|ref/1062-1111
-SYV-DE-GGDEIEGNPTEN----GVKEKK----TIK-D--YEFV-KTRTDKNGNV--THVYKKVVK
>gi|343403094|gb/420-469
TDYK-DIDTKENLK--PQDK----GWKDPA----TID-G--YEFV-KTEKDREGNR--IHWYKKVEQ
>gi|322391739|ref/425-474
TEFK-EIDTEKTLR--PSER----GYKDKV----DID-S--YEFV-KTTKDREGNQ--THWYKKVEQ
>gi|315660355|ref/1854-1904
TRYV-DI-TGNEVQ--ETEE----GTHQPR----YII-GDKWRYS-GVTVTENGIT--KHVYERIQS
>gi|315660355|ref/1318-1368
TRYV-DS-EGNEVQ--ETEE----GTHDAP----GII-ADKWQYT-GQTAAENGIT--THVYQRIQS
>gi|315660355|ref/1720-1770
TRYV-DT-DGNEVQ--ETEE----GTHQPP----GII-GDKWQYT-GKVTEKDGIT--TYVYERIQS
>gi|315660355|ref/2055-2105
TIYV-DT-NGREIV--PSRK----GQLPPE----QFI-GQDWQYT-GHKIEKDGIT--TYIYKKVEN
>gi|324993056|gb/657-704
TRFV-DE-TGQELS--SPEQ----GLVASK----RIS-G--YDFQ--SSTDEDGIR--THLYRAIVH
>gi|332361398|gb/593-640
TRFV-DE-SGQELS--DPER----GLVASK----SIA-G--YDYQ--SSSDEDSIR--THVYRASVH
>gi|332361398|gb/849-896
TRFV-DV-EGRPLA--AAEF----GLLDAK----TIE-E--YGFV--SVSDANGVR--TYVYKPKTH
>gi|324995639|gb/785-832
TLFL-DV-DGRPLA--AAEF----GLLDAK----NFE-K--YGFV--SVTEANGVR--TYVYVPKTN
>gi|339458044|gb/1076-1124
TRYV-DIATNTDIL--NAEE----GHFKGK----SIA-G--YTFV-KSE-EKDGII--TNYYKKVTN
>gi|282882357|ref/498-546
TEYV-DK-DGNALPGLVVGE-----ENGHK----DIA-G--YKFL-REEKTANGVK---YIYEKISA
>gi|282882357|ref/396-445
TEYV-DN-KGKALQEPVVGE----TKGEQK----TFD-G--YKFV-KEETTENGVK---YIYEKIKI
>gi|225624909|gb/1434-1482
TNHV-DE-EGNPIA--PQED----GTTPKR----QIS-G--YEYV-RTVVDEEGNT--THIYRKLSN
>gi|225624909|gb/972-1021
TNHV-DE-EGNPVA--PQEE----GTKPNK----SIP-G--YEFTGKTVTDEDGNT--THIYKKTPE
>gi|256544395|ref/2277-2325
TKFV-DE-KGNPIA--KSED----GKKPKK----DIK-G--YEFV-KTETDKDGNT--IHIYKKKEN
>gi|256544395|ref/1953-2001
TKFV-DE-NGNPLA--MEEK----GKKDKK----DIP-A--YEFV-RTYTDKYGNI--VHVYKFKQT
>gi|256544395|ref/1898-1946
TEYV-DE-DGNTIA--PKET----GTKDKK----DIE-G--YEFV-RTTTDDKGNT--KHIYKKKTT
>gi|256544395|ref/2331-2379
TKYV-DE-NGKTIA--PNED----GKKSKK----DIK-G--YEFV-RTETDDKGNT--KHIYKKKSS
>gi|260585001|ref/2784-2832
TTFV-DE-NGNVII--PNEN----GEVPAK----DIV-E--YELV-RTEKDANGNV--RHIYRKVVA
>gi|260585001|ref/2730-2778
TTYV-DE-NGELII--PNEN----GSHPGK----ELK-G--YEIV-RTEKDTNGNV--RNVYRKVTP
>gi|307708335|ref/2287-2335
TTYV-DE-NGELII--PNED----GSHPRK----SLE-G--YELV-RTETDANGNV--RNVYRKIQS
>gi|260584545|ref/2570-2618
TSFV-NE-NGEKIT--PDEN----GEQPSK----DIP-G--YELV-KTEKDANGNV--RHIYRKVAT
>gi|260584545|ref/2513-2561
TSYV-DG-NGNPIR--PTKD----GEHPSE----KIP-G--YELV-KTEKDANGNV--RHTYRKVET
>gi|260585003|ref/2723-2771
TTYV-DS-KGKTLI--PQKD----GEQPSE----NIP-G--YELE-RTEKDEKGNT--RHIYRKVET
>gi|317495946|ref/1823-1872
-YFK-DK-EGNIIPGFDPEE----GTVDKK----EVP-E--YRFV-ETKKLPNGDT--EHVYEKVKT
>gi|329767945|ref/11-61
TFFK-DK-EGNEIPKYPSEP----GTVDKK----DIP-E--YRFV-ESKKLPNGDT--EHVYEKVNT
>gi|260585001|ref/2608-2657
-FFK-DK-EGNVIPGYPVEE----GTTDKK----DIP-G--YRFV-ETKTLRNGDI--EHVYEKVTT
>gi|329768358|ref/2628-2677
-SFK-DK-EGKEIPGNPTEE----GTTPKK----DIP-G--YKFV-ETKKLPNGDT--EHVYEKVTT
>gi|322517765|ref/24-74
TSHK-DK-DGNEIPNYPTED----GEQPKK----DIP-G--YRFV-ETKTLPNGDI--EHVYEKVKT
>gi|228476394|ref/355-405
TKFV-DK-EGKEIPGYPTVD----GEQPKA----DIP-G--YRFV-ETKKLPNGDI--EHVYEQVTT
>gi|329768358|ref/2578-2627
-SFV-DT-NGHVIEGTTTEE----GTTPKK----DIP-G--YRFV-ETKTLPNGDT--EHVYEKVKT
>gi|306824580|ref/9-57
TSFV-DT-KGNTLI--PSED----GEQPKK----DIP-G--YRFV-ETKKLPNGDT--EHVYEKVKT
>gi|329768358|ref/2528-2577
-KHV-DR-KGNPIPGTTTEE----GTKDPK----NIP-G--YKVV-ETKKLPNGDT--EYVYEKVTT
>gi|260585001|ref/2558-2607
-RYV-DQ-AGHPIPGTEIEE----GTKEPK----NIP-G--YKLV-STTTSGKGDT--VHTYAPVQT
>gi|307706159|ref/2550-2599
-THV-DE-AGHTIPGTETEE----GTKEPK----KVP-G--YKLV-STTTTPEGDT--VHTYALVQT
>gi|307708335|ref/1870-1918
TSFV-DK-DGNPLS--PTED----GTKPTK----DIP-G--YKIV-KTEIDEKGNT--KHIYEKVTT
>gi|322374766|ref/622-670
TSFV-DT-KGNILA--PSED----GSQPKK----DIP-G--YKIV-ETKVDEKGNV--VHVYEKVKT
>gi|329770095|ref/533-583
TKYV-DN-KGNAIPGYPEVD----GTVEKK----DIP-G--YTYV-GTKTDEKGNT--THIYEKVVT
>gi|260585003|ref/2652-2701
-SYV-DS-DGKEIPGNPTED----GENPKK----DIP-G--YEFV-ETKKDENGNT--KHIYKKIPA
>gi|332360687|gb/3-53
TSHK-DK-EGNEIPGHPSED----GEQPKK----DIP-G--YEFI-KTITDKDGNT--VHVYRKKVT
>gi|343400889|gb/1893-1942
-THV-DE-NGKPIPGYPTED----GEQPKK----DIP-G--YEFV-ETVVDANGNI--KHIYKKVVT
>gi|322389616|ref/2714-2763
-SYV-DE-NGDPIPGNPTED----GEQPKK----DIP-G--YDFV-KTVVDKDGNT--QHIYKKTVT
>gi|260584545|ref/2345-2395
TDYV-DE-NGKPIPGFPSKD----GEQPKV----DIP-G--YRYK-ETITDEHGNT--RHIYEQVKT
>gi|260585003|ref/2601-2651
TIFR-DK-EGKEIPGYPSED----GTTPKK----DIP-G--YRFV-ETITDNDGNT--KHIYEKVKT
>gi|322516854|ref/2063-2112
TEWV-DE-KGNPIK--PVTP----GTYPAG----STP-N--YELVGTVTNPETGKV--THIFKPVTN
>gi|322516854|ref/2279-2328
TEWV-DV-DGNVIR--TKED----GSQPAG----KVP-N--YELVGTVKDPETGKV--LHIFKPATK
>gi|322516854|ref/2171-2220
TEWV-DT-EGNVLK--PKEE----GVKDPG----KVP-S--YKLVGTVTNPETGKV--THIFKPTTS
>gi|322516854|ref/2225-2274
TVWV-DV-NGNPLK--PTVP----GTEEAG----TVP-K--YKLVRTVTNPETGDV--IHVFTPAPV
>gi|322516854|ref/2117-2166
TVWV-DV-NGKPLK--PSAP----GTEEAG----KVP-N--YKLVGTTVDPTTGNV--IHVFTPTPV
>gi|322516854|ref/2332-2381
TVWV-DI-NGKPLK--PLAE----GSNPAG----EVP-G--YELVGTKVDPATGNL--LHVFKPKGS
>gi|307707974|ref/1546-1595
TVWV-DV-NGKPVK--PLAE----GDNPAG----SIP-G--YALVETINVEGTGNV--IHVFKRTTN
>gi|227499830|ref/792-844
-NWIEDK-TEKPLQ--DSQE----GAKPDTDGN-DIA-E--YKYLRTKVDNKTGDV--TNIYHKIVT
>gi|227499830|ref/630-682
-NWV-EENTGKVLK--TKED----GAKPDTEGD-DIK-D--YHKVKDLTDQKTGDV--TNIYHKIIT
>gi|227499830|ref/845-897
-NWKEDH-KGTVLR--TQEV----GEKPDTDGN-DIE-N--YKWIRTDTDPDTGDI--TNYYHKIKT
>gi|227499830|ref/1009-1061
-NWVEDG-KNDPLK--PQED----GAHPDNEGD-DIK-D--YYLVMTKEDKKTGDV--LNVYRQRTT
>gi|227499830|ref/683-736
-KWI-EENTNKVLR--GPED----GSKPDDDNIWDIP-E--YKLVRTETNPDNGDV--TNIYKKIDV
>gi|227499830|ref/898-951
-YWV-EMEKNNTLK--DPED----GAHPDDDGVWDIP-D--YGLVRTTVNPDTGDV--TNIYKKIVP
>gi|259047379|ref/1643-1694
TTWV-DT-NGKELH--PSKE----GQHPDTKGT-DIL-G--YKLV-STTTKENGDV--VNVYRQLTT
>gi|314934101|ref/257-310
TVWL-DD-KGNIIKDAVEDD----KTSKNQRGVIQIS-G--YKYI-KTV-TEDGIT--KHIYKKVEL
>gi|223044031|ref/289-342
TVWL-DD-QGNIIKDAVEDDKTPLNQRGVI----QIE-G--YKYI-RTET-EDGIT--KYIYKKVKL
>gi|314934101|ref/114-167
TVWL-DD-QGNIIKDAVEDNKTPASERVPV----KIP-G--YQHF-RTSV-SDGIT--KFIYRKVNS
>gi|358058224|ref/485-538
TVWM-DT-KGQILKDPIEDDKYPKSARQAG----EIP-G--YRFL-ETK-VKDGIT--IHIFEKLSK
>gi|358058224|ref/288-341
TVWV-DT-EGNILKDPVEDDKNPEEAKEVG----SFK-G--YQYI-GMEM-KDGIT--RYIFKKLNS
>gi|339457746|gb/405-452
TIWR-DT-EGNELK--PYEV----GKKAAL----EFN-G--YRFV-KTT-TIDGIT--IHLYEKIQK
>gi|289167907|ref/1580-1627
TIWV-DE-NGKPLK--PEKP----GTHEPG----NIP-G--YRFI--TTTTKDGVT--IHKFEKITP
>gi|227499827|ref/34-83
TIWV-DE-NGNQLK--DPKN----GSVEKG----KDPEG--YEFV-GTVKTKDGDT--AHVYKKIAK
>gi|337282809|ref/7-66
TKWV-DE-DGNELKPADAKAPSELGESNEAFEHGEID-G--YVFVRTLTDETEGTV--THIFRKLQD
>gi|322377340|ref/344-401
TKWI-DE-EGNELKPADAKAPSVPGETNEAFEHGEIE-G--YVFV-RTETKGDVVT---HIFRKVSP
>gi|339452509|gb/1553-1612
TKWV-DE-DGHDLKPAAVKEPATLGGANEALEAGEIE-G--YVFLKTEKDEENHIV--KHIFKKVSS
>gi|260584914|ref/944-1003
TKWV-DE-YGNELKPTDAKKPSVEGEANEAFEPGTIE-G--YEFVETIPVDANGIV--THVFKKKQA
>gi|329768582|ref/101-160
TRWI-DE-NGNELKPADAEASTKLGEENKAFDHGEIE-G--YEFI-RTEVSKSGDV-VTHIFRKRAN
>gi|260585021|ref/217-276
TRWI-DE-NGNELKPADAKAPKVLGEENEAFEHGEIE-G--FEFL-RTEKNKDGDI-VTHIFRKREV
>gi|260584126|ref/24-72
TTWV-DE-NGNPLK--QTEK----GTKDPG----SIP-G--YELV-KTVVDKDGNV--QHIFRKVTT
>gi|241889299|ref/2386-2434
TTWV-DE-NGNPLK--PTEN----GNLEAG----KIP-G--YEFV-RTVVDKDGNV--RHIFRKVTV