HMM Seed Alignment: TIGR04113
Download Alignment>gi|295697241|ref/2-729
ISLTGTAPQPLSHYLKALGVFRILA-----EQ-ADPEARGWW--EDERFHIETALHPQDVES---FFLAEYRPTPLVTPW
NGG-----SGF-----------------F--GRDE-ALRG----------------------------------------
---------IEE-----SQTQRLHLYRTTIQ--------------TARA----------------ILKEFGLEKKPDNKD
------------------------------------------------------------------KRPLVQACRNRFPD
AAVAWVDAAVVLTTGD-LGFPPLAGTGGNDGNLE-FTNNFMQRILNVMSPKT--GQPTDTGGMWLRAALWGDAT----PE
LIRG-AIGQFSPGEAGGPNAR-SGFSGESL-VNPWDYIFMLEGALVFASAAAKRLEKQSGSVVS----APFTVYPTTVGH
RSTAE------LDGAQAAR---AEMWMPLWRQPVSLPELLYIFREGRAQLSGDRVR---RTAKNGVDFARACATLAVDRG
IESFQRYAFLMRSGK----AYLAVPL-NRFIVRRQAY-A--ELLAE----LD--TWLDLF-----ARVENTSHA----FQ
SALHRIREAEFLYCQYGGARR---MQDVLVALGRAEQLLARVPSARQ-----K--VPPLVLRNPGW----WRASDDGSPE
FRIAGAFVSVY---P---GSAGSIRSFLSPVDPGHP----GRWGPETDPP----------RVVWKHTDVAANMAAVLRRR
LLETHRSVGGGENAGSAAISTDEFDKPTAG-PR-----TVPLSLIGQFLKDPGWDARVADLIWGLLPLYRSVASDEVRSS
GSPGFRFHRSMTPLPWAYILARLISAPNAQLQRV--------------FPGAMPLPVPDRMLSLL---AAGE--LNRAAG
VAEQRLRGSGFSSPFFRKGSLPRVNHWTAGNPQRTG---------TRILAALALPIADRDLRQLAQLAGLTS
>gi|220935607|ref/10-710
IVLRGCAPTPLAAYLKALGVLRLVC-----EQ-VDATAKGWW--QDECFMLRTRLDDNDLRR---FFIEDYRPTPMLSPW
NGG-----SGF-----------------YRKGNET-AWST----------------------------------------
---------LEKIIT--TQAERWRPFRDTAE--------------VMAD----------------ALEHLKLTEKPAELD
------------------------------------------------------------------KRALLARLRATLDD
EFLPWLDAAVLLTDDK-PDYPPLLGTGGNDGRLD-FTSNYMQRLLEMFDPVT--GKAQGDVGNKLESALFARPV----PG
MTAL-AIGQFSPGAAGGPNSS-TGFDSGAQ-VNIWDYVLMLEGALLFAATATRRLESADPSALS----YPFTVRPSGGGS
GAVA-------LGDERPAR---AEIWMPLWERPASLPELRVLLGEGRVTLNG-------RLPRDGLDFARAVAKLGTDRG
VRAFQRYAFMMRSGK----AYLATPL-NRFHVHRNPK-A--DLIDQ----LERGDWLRRF-----RRAARSTHA-PARLQ
GLAHRLDDALFDLVRVADPRR---VQEVLKVLGEVQFYLALSPSLRE-------QVRPVPRLDAHW----VEAARDDSHE
FRVAAALAGL--------DDGLPMGVHLAPIDPVKR----NVWAPESRLA------------VWGQGNLSDNLAQVLQRR
LLTASR--------------TDLNDKPLSG-RC-----PADEGAVAAFLAGDADERRIAELMAG-LACARLPARLPLRQR
GASEA------SSLPMIYALLKPLFVPDAQLREAGV------------LTPDGCLPLPPALPRLL---RAGPAGVGRAVD
LARRRRRASGLADA-----------GWRLTPPYPDG---------GRLLAALMIPVEIRVIKGFIKRLADHK
>gi|225158936|ref|ZP_03725249.1/8-722
HLLPGCTPTPLASYLKALGIFRILS-----EQRPDTHPRAHW--QGNTFVLTTTNDANDANTLVDFFLNYYQPTPVLAPW
NGG-----SGF-----------------FPKDNSK-ALDA----------------------------------------
---------ILS-----STTPRFAAYRDTIA--------------AART----------------ALASLNLTEKPDSKE
A-----------------------------------------------------------------KETLLLRCRNTFSE
TALEWLDAAYVLTDEG-AKYPPLLGTGGNDGRLE-FTNNFMQRLSEVFDLASPDATPAKTSADFLRNALFDTPV----TG
LADN-PIGQFSPAASGGANAS-TGFDAKSA-VNPWDFILAIEGAMLFASAAVKRLEGTTPGQLA----YPFCVQAAGAGY
GSAA-------TADETDSR---CEIWMPLWPAPALLPEIKTLFSEGRAWVGR-------RLARNGLDFTLAVASLGVDRG
IAEFQRFAFYVRNGL----AYFATPL-QRLAVSRNTIVT--DLIAT----CD--PWLQRF-----FSKAKTDTA-PSSIR
RAARRLENAILAQATAAQTNNSGVTQELLIALGECERALATSEKWRA-----DSYIPPIPPLPRAW----VLAADTGSRE
YRLAASLASLHLYAK---NTFWPIRRHLEPVKLHHGENAWAAWDDSALND----------VVASVNVPITDTLCAIMRRR
LLLAKT--------------GSHDTWPEFS-KL-----SAWPVDIAAFIEGLTDDDRLAQLLWG-LCLVDFSEDSNRTNM
PARPDGTERDITP-PAFYAQLKLCFAAR--------------------LPDSRAVPVTPDIFNLA---ANGD--GARASA
QALRRLHGSSVPVL-----------HINIPLDGAAS---------RRAAAALLFPLWDSQLAATCFPVALAL
>gi|320104068|ref/6-706
HILKGCAPTPLANYLKALGILRLVG-----EQ-ADLKARGWW--EGERFCLLTTLSKEELER---FFLEDYAPTPLVAPW
NGG-----SGF-----------------FKKDNRK-AILA----------------------------------------
---------IRS-----SSSERFEPFRQGIF--------------QAEQ----------------ILGD--LTVKPEKKQ
------------------------------------------------------------------KLAIQRKSVLAWRG
EHRKWLDAAFVLDESREPIYPSLLGTGGNDGRLD-FTNNFMYHLVLLFLEKSSTRSSGNETRDLLCNALWSDLT----RH
LEIA-AIGQYQPGNAGGANSS-TGFDGGNL-INSWDFVFAMEGALLFTSCATRRFDPQASSQAS----APFAIRSHAAGF
AT---------PGFEKAQR---GEQWMPLWRQPATLADLSAMLGEARIQLGR-------QSAHRPIDAARAISRLGVARG
VEAFVRYGYLERNGQ----SNLAVPL-GRIEVRYQPR-S--SLIED----LA--GWMDRL-----QSRSRDGKA-TARLI
HAERRLADAVFAALTHDHTSDR--WQAILLAAVEVETLQATGTALE---------VGPIPRLRPEW----VAAVDDGSAE
VRLALALGSAAAEYDKR-KPVDSVRYHLLPLEPKNA----GRFQLADKRL------VNDPRVVATGRDPLRDLAAIVERR
LIESAQ-------------KGQRRSRLVAASGC-----EARLNDLAQFLRGELDLNRLFGLARA-FMAIRWDRWSKAFQP
KVNQKNHHPEECWLALRLC----CLPWE--------------------ITENLDIPADERIVRLL---LAGD--ASRAIE
IARQRLRSKGIRPP-----------IYAGMTDPQTA---------RRWAAALVFPIHRRTAQNIVGYLSPTM
>gi|218289940|ref|ZP_03494117.1/5-750
IRLYGCRPVPMVGYLKAMAVLRLLA-----EQ-RDPNIRGYW--HQDVFCLQTELSPADLVD---FFLRMYQPTPIMAPW
NGG-----GGF-----------------IRGKNSE-PVDW----------------------------------------
---------LRN-----SSGARFRPYRDALQ--------------AVDR----------------VLAGAPLSDKPKDED
------------------------------------------------------------------KVALLARLRAELPD
EAVEWLDAVAAITADR-LGFAPIYGTGGNDGNFE-FTNNFMQRLQELFQQD---GTPTQVAERLLRAALFDEPV----NG
LLNV-SIGQFQPGQNGGPNAG-PGFEASRR-VNPWDFIFSLEGGILFSAAAARKFGRQYTDFT-----YPFTVRAASGGQ
GAMSV------TEEGQKAR---AEMWLPLWRRPASLPELEQFVQEGRAHVRSRRMSVGWRPVRTGVDFTRACAGLGIDRG
IDSFQRYAFLERFGR----MYYAVAL-SRFHVRRRPE-A--DVLDD----LD--RWLTQV-----QALPSMKEP-PLSAL
SALRRVEDAVFDLCQHGGAHR---VRELIVAVAQMDRVVSLRPNLRE-------RVEPLVLESKAWIEQAWPKDAREQAE
FALGLAIGTMQD------VDGISHRQYFAPVLVGERRT--CQWVSNEEMP------SARVRFAFDSPDLVRCLLRLAERR
LLDEER-VRQRAGGSQEDKSEDNQDKSKIGFHCRHDRFAARLEHLVPFWFGETRDARILDYAWA-FSAYQGDAPNVRHDE
AMP--------AWIPYLYALLRLVFTSERDLRQALRNVSRRGLGQPPSVEDRFSLPVPREVLALVGTDRSAD--AVRARQ
VLERRFVASGLSTR-----------HRGTDTFGFSP---------RRMLASAIVPIQSRSLEILASRLWPKQ
>gi|73670574|ref|YP_306589.1|/5-736
IELKGCSTDNFSSYLKALGVFKIFS-----QQ-KDNNARAYW--KNNIFVINAEYDAAAMTN---FFLHEYAPSPLFRPW
GGR-----SGF-----------------YKGSSEKSAREA----------------------------------------
---------LRPLID--SKDSRFDSLRKVYD--------------AFQK----------------FSDSKGITEKPSGDK
------------------------------------------------------------------LVEFLEDLRAQLPE
DILEWLDTCYVLTGNN-RKYLPLLGTGGNEGSGN-YSSNYLQALTEVLV-----KKKEKESKQLLEHSLFSKHT----PK
LSNL-SFGQLSPGAVAEANST-EGYRSTSKLVNPWDVIFSIEGTTLFAGSASKRFGGSQGGFGSNFGAFPFTVLPSVAGT
GNITFKDNFKDPNKKSDYKTFDSEFWLPLWNRPTSYNEITYLFHEGRAQVGR-------RKANNGLDFVRAISSLGVDRG
IDAFVRYGRLKRQGSGKNANALAIPL-GTFKVRQQKN-V--NLIEE----LD--NWLNVL-----RDKCSSKESVAARYS
SSLRSIEEAIFSFSKHGNISD---FQNLLIELGKAERSFASAGANRP--------IRPLNDLSPSW----INACDDESVE
FRIACAVASIYD------KKIGSIRRQLEPSEINNK----GRLKWSETRS----------SVVWSNTDLCSNMKAILQRR
ILEEKM--------------KGSNFTPIGG-KV-----AVSLSDIGRFIRGEVNDKKISDLIWG-LSIIKWKYYNKERHG
VDWNNGID---VMIPRAYAFLKLIFIPGNLIFENQRWEISYD------EKKGIHLPSLPEVLRVI------DTQQDKAFE
LVTRRLKSSGLTPL---GVRRNKVAAPDFNVNTEDR---------ERIVASLLIPIWQYNR--LFELVLQPP
>gi|258405743|ref/4-779
YTLPGCSTRPLGSYLKGLAVFRLVA-----EQ-KDPDVTAWW--DKGTFRVHTRLAPEELTS---FFCEQYTPTPIITPW
NGG-----SSF-----------------YPGDNTE-GLEA----------------------------------------
---------IVQ-----TGDSRFRIYKEAIE--------------AVSSWPEWGKNVNTVRELMAALQGMISSSNPGKKQ
DELFTLQNNITNLAEKVKTTEGGDPLGMRLVDLSSRASEKAEVYKQLWNTAKKARTVYTKDIREQTKKIILPLCRSRLPD
ACLEWLDALCAIHADGEISYHQVLGSGGNDARLD-FGNNFMKKISALLL-----GSDQSASRKFLSASLWGTSV----EG
LPKT-KIGQFDPGRAGGYNQG-MGIEAKDFTASPWDFILTIEGTLLLASSVGKRQGVSTGSTLT----SPFTVRFSPVGF
TSNVY------TEPEGPE----TEIWMPLWNQPARYGEIKQLFSEGRCSIGK-------RQAKSGLEFSRAVGTLGVDRG
ITAFERYGFLKRRGE----NKVALPA-GKIAVRFKPS-L--ELVNE----LD--PLLSKL-----DQFLRAFKKPPTSFL
QARQKIDQNIFNCTLQPDPVQ---FLKIVRSLGQMEKRIALRDRDKD-----PKLPQPLFGLSPQW----IIKSDDGSPE
TRIAAALASIHST-----GKVGPIRSNMAGVRAQAP------WHWEDRDS----------QQHWFGSDLTEKLGNVLTYR
LMDAER--------------KSVSNIPFMG-NL-----ELSPYDVMPFLHQETKDDLLEDLLWG-FTLINWRKSGIQSIR
NKWEKPTQQ--TVLSRTWCLLKLLHHPN--------------------KIKGHSFKREKSISHLL---QAHR--VDEACN
KATQRLRISNLHP------------FPIYFEEELEP---------QRLLASLMLPVKDQHILENLVLERTTI
>gi|87307453|ref|ZP_01089597.1|/7-934
IPLFGCRHDVLGHALKAIGILRAISACAALED-RDPDAEGWWSLDDAAFMIRSSRYPDAASL-VKFFAEKYQPTPIIAAW
NKS-----GGVTNKIEVAILCLSGDVSQFRADHEA-MLEASGLKKTKKLSKVGALKFALSDAAHLDDLKKQATVAGLVCS
YKEKRTRGKVTTEVTIASTVEPLERFRREQSVPLAELGFSVTKNLSNDGQLKFSTNSSNRSNVERLIADFNASLSDGSRD
AGSDGNTKSQTSNGPLYAEISAKESGTDGTLPKIERMSMDPVLLRCLALAREWVNELQTQGALRNDSINILAQYRDNLPT
QVTEAFDAISICHLIR-RNDNPLFVNRGQQGRTDVFRMNWEHFIEF-----------RNAPDVFTQSSLFGERITTGHTG
SVKG-KGTPFFPDVIKSYNQG-LDWVTEDLPFCPLDYLLAVEGAFAMRGSVSKSLGARSQAYAA----FPFVFEGPESM-
-----------TDDQGDVTGLGASLWFPIWTRPATFGELHSFILDSQARLPK-------KDCRFSSDFIRAIRSQGVDAG
FTAFQEFRFKMKGAR----IPWAVT--GQFVTCSTTTSA--SLLNEFLAPVDASGFLNQFRFRTPREVKRDRKP---DLH
PYRAPILEAIETAAVEPSSTK---IIDVLSKLATLNTQLAQSKALREKVSGGRVTFVP-PLRCDDW--SSALQDLQVDPE
FEIAWALASICGHEKQPDGTSSQVEPFLGSLIPLRRLG--EKWVLPEMPD------PPSPQAVWTGIDLARDLSSVLARR
VLDSAK-----------------DFRPAIVGTC-----TAQLTSILRFLQGELDDRRIARLVEA-LSLIDWRYSAAHTVV
NKSFSDEEVDWDSVPIAYAAARSLIEVACEKRRTEAAEIE--------DRSGPRTKVQRTVALLS---RQEPRLAALATT
DALRRLAIVGVPNPYGEESRREKPKLSGRDVVLVDGSLGIDVDLARRLAAAVLIPLDRRDRWSLFRSITLPQ
>gi|157273400|gb|ABV27299.1|/10-703
LALPGLSPDSLGNYLASLGLLRVLS-----RN-----------------------------------------------W
TRTRIAWLNGV-----------------LRVVGGPPTLDE----------------------------------------
---------LLNELVRIADSRDWTRYNKKDE--------------KKKE----------------WSDAQKESTKAK---
------------------------------------------------------------------SGTPLALWQAKAPE
SQLQLFAAHAVPHAH--VSFNPLLGSGGNAGRRD-FAAGWKKAVEALA------NATREKKKDALRSWLLGQPV----TW
MVEGLNAGSWFSQATKLYNSGQTPWREGQL--LPWAMVLACEGLVFFAGGASRRLGAKSARTVG---AFPFITQPIAAS-
-----------AEKEADRLC--GEVWTPLWSRPMSLAEVSMLFSRGRAELRG-------RGALTPASFATAIRKRGVDAG
VSEFLRFTLRRTTSS----DTFEPRLEARFLLGADARGDGKAVATA----LDCTTALIEQ-----RGFPKDGKP----FA
GLRGPIESALLEVASEPHRPEA--GIALLDAVVRALDRIDRNRSFRE----GRVHWKPLPL---EWL-PSLFADEQPGVE
ARLALSLVSAF-------PPTLPFAAFRFGVQWTREQNGKYEYDWTTEPEQFEHSKVAPAHWVWGPGELARVLGSVLSRR
LLEEAA------------RDGTNTERPQGRAPL-----PATTSQIRQWLTGELDESLFAAWLSR-LALFDWRIIPKKVCM
LIPKEDNTPRADGALALLGLFQPLIDWQPLIVRDLAPNDLLSK-----ETGARTTEAARALVMLI---RAGN--IDAAVR
LAGSRYAMAGARLA-----------SFNVPFATHDP---------DRLAAALLFPLSAYDRTTLFTRWLRPR