HMM Seed Alignment: TIGR04096

Download Alignment

>gi|254516504|ref|ZP_05128563.1/1-496
TILRHKTAISRAQLSVPMFSLVNSGYINGS-YTILDYGCGKGDDLRELQAHNIDCMGWDPVFRPDTELTPCDIVNLGYVI
NVIDDIDERRETLKLALKLAEKLLVVSA-MLGNESVFQRYTPYKDGVLTKAKTFQKYYYQSELKEFIERTLNREAIAVGA
GLFYVFTDKAEEQKYLSEKQRTKINWRQITSRPRQESTAKISKSKIEENKDLLRDFWYACLDLGRPATNDEFDHSDQ--L
RHLFGSHQAA--LGICEEEFDQT---DFTESQSIRKGDLLVYLALDHFGKRDTYSRMPDRLRRDIKYHFQRYQNARAQAR
ELLFAVSNVEMISKACVEALELLPAAYLSEAHGLTFQTRFLNLCPSILRVYIGCALQLYGEIDN-VNLIKVHIQSGKVTL
MAYDGFESEAIPRLKERIKIKMREQDIDFFDYVYEYRPQPLLMKSKFMAADEAGYAIQAAFDEELHQILREDLDQGQDDE
HVSAERLDFLLRDHKIKLKGHSIIRD
>gi|197336921|ref|YP_002157729./1-492
GIDRHKTAIVRHELSAPMKTLVKHGYLEGD-YSIFDYGCGRGDDLRELEAHGLDALGWDPNYQPDNEQIHSDIVNLGFVL
NVIEDQDERLEAILNAWALTQKFLIVSV-MLANDNYIAQFTPYKDGVITSRNTFQKYYAQSEIKNYIERNLQEEAIPVAP
GIFYVFKDKLEEQEYLQRKFKRHHQWQQLTS-PQPIEAKDKAKLLITQHQELFNAFWGSCLELGRIPANDEFSGSVQ--I
RELIGSHKKT--FGLLEELFDTH---EFKQAEKNRKEDLLLYFAMGLFEKRKPYTHQPEALKRDIKALFGDYKTAQHLAT
ELLFAISDTELVERQCEKAHAILPASVLNQGHSLILHKQLINDLPLLLRTYTGAALQMYGELDDEIDLIKIHMTSGKLTL
TSYDDFEQS-VPYLVERTKIKMADQDIDFFDYVEENRRPPLLNKHLYMGKETENYTKQLSFDKRLAKLMQYDYQK---ET
MLHRFELEDKLKNIRKKIKKYQLMTS
>gi|262274822|ref|ZP_06052633.1/1-492
IIDRHKTAIVRHSLSAPMKALAKNSYLNGD-YSICDYGCGRGDDMRELLAHGIDVLGWDPNHYPDGEKAHSDIVNLGFVL
NVIEDTDERLDALLGAWELADKLLVVSV-MLGTEQFISQFTPYKDGVITSRNTFQKYYQQSEIKSYIESSLDEQAITVAP
GIFYVFKDKLEEQAHLQNRYRRHQGWKQLTA-TKPPSQQEKLKLTISQHAELFEAFWMTCLVLGRIPANDEFEQSVM--V
RELIGSHKKT--HKLLCEIYDEA---DFEASEQARREDLLLYFAMALFEKRKPYTQQPEALKRDIKAFFADYKTALTLAQ
DLLFQIADSEEIEKACNTAHQTLPASILNEGHSFIFHQRYTEFLPQLLRIYVGAALQMYGDLET-VDLVKIHIQSGKLTL
TTYDDFENSAVPLLVERVKIKMAEQDIDFFDYVAESKRPPLLNKGLLLGDDFEQQEKQRSFDKRLAELLGITHQQ---EV
LMGRAMFERGLQEEGKAIAGYRLMKH
>gi|294140881|ref|YP_003556859./1-493
SIDRHKTAIVRHELSAPMKQLAKQGYLNGD-YTIFDYGCGRGDDLTELQAHGLDAIGWDPNFRPEDDKLTSDLVNIGFVI
NVIEDQVERSEALIGAWLLTQKLLVVSA-MLANDKYISQFTPYKDGVITSRNTFQKYYAQAELKGYIERTLDENAIAIAP
GIYYVFKDKIEEQRFLSGRFKRHHAWKQITA-PTP-TSEEQARLLFTRHHELLNRFWDRCLQLGRLPVQEEFSEIAD--I
NSALGNAKKA--LKLLLQVQGEQATSEFEAAIEMRREDLLVYFALCQFEQHKGYQHLPEEQKRDIKVFFDTYRVALAESK
TLLYRIANTEEIEAACSQAHESLPASKLNLGHSLELHKKFLPYLPALLRVYVGAAAQLYGELDE-IDVVKIHITSGKVSF
MGYDDFDTSPLPTLRERIKVKMWQLDVDFFDYVEKDNRPPLIYKSQFQDETFEDFNKQISFDKRLKKEDIFEDNK----R
PCNLNAVTSSLKPKGLEIRGYRFYKL
>gi|218438206|ref|YP_002376535./1-478
FIERHKAAILRKTLSRPVRLALELGLFTPGVTTFFDYGCGYGGDIERISQQGYESAGWDPYYRPESPLISADIVNLGYII
NVIEDIEERRQALIKAWELTRQVLIIAAQVLIDDRD-RGLVAYGDGIITRRNTFQKYYQQEELKSYIDQVLNVDAIPIGL
GIYLVFRDGEVAQGFRVSRFVRSATTPKIQK-QLK---------RFEDYEDLLTPLMEFYTQRGRLPLKGEIENESD--L
KNEFGTIRRG--FEVILQVTKAE---DWEAIAEKRRQDLLLYLALSKFSHRPTSRELSSKIRKDLKALFGGYEQACLLAD
LMLTSLRDLEKIEQVCQSS----PVGKKLKN-SFLIHISAIESLPTLLRLYEGCASRTVGRLED-ATLIQFSFRHPKISY
LFYPDFERIAHPTLHTGMEIYLSDLQVHYRDFSQEDNPPILHEKNLLVNSDYPLYEKFTKLTEKERDWGLLDDFK----G
INRLQGWLTCLKEHCAMIKNHNLYWD
>gi|218245848|ref|YP_002371219./1-477
QIERHKAAIKRKSLSRPVRLALEAGLFTPE-TTFFDYGCGYGGDVKRIAQAGYDSSGWDPYYFQDHPKKSANIVNLGYII
NVIEDLKERQEALINAWELTSQVLIVAAQVLIDDRD-RGIVAYGDGIITRRNTFQKYYEQEELKLYIDQVLKVDSIPIGL
GIYFVFRDENQAQTFRISQVRSHFSTPRIQS-QLK---------RFEDYEPLLTPLMEFFTERGRLPVTGELSNELE--L
KQEFRTFRQA--FKVVLQVTNQE---DWDNIAEKRRQDLLLYLALSQFSDRPSIKELSDTVKQDIKTLFGSYQKACMVAD
IMLCQVGDLEKIANLCQNS----PVGKKLKS-ALAIHISALESLEPLLRLYEGCASRTIGRLEE-ANVIKISWQTPKISY
LFYPDFDENPHPTLHSIMEIQLGDLRVKYGDFSRHKNPPVLHQKDALVTSNYPFYEQFSQLTKQEQELGLLDNLK----E
IYRLEGWLNCLEKRSVILQGHELVMN
>gi|166365175|ref|YP_001657448./1-477
IIDRHKAALVRKTLSRPARLALAAGLFLPE-TTFFDYGCGYGGDIERIAEQGYQSEGWDPYYRPDSPLIESDIVNLGYVI
NVIESAEERQEALLKAWQLTRQVLIVSAQILIDDSE-RGLMAYEDGIITRRNTFQKYYQQEELKQYIDSTLGVDSIPITL
GVYLVFREEEKAEAFRLSRWRSRATTPKIKT-HLK---------CFEDYEDLLTPLMEFYTQQGRLPVAGELLQEEE--I
KAEFGTFRRA--FQVILQVTEAE---EWEIIADKRRADLLLYLALSQFSHCPKVRELSPATRADFKALFGSYRNACALAE
EVLISAGNLPAIACTCENS----SLGKLSRY-SLTIHISILEKLPMLLRLYEGCASQTIGRLEN-ANVIRLSFRQPKISY
LYYPNFDTEIHPILATSMDVYLGSADFSFRDYRDSPNPPILHEKELLVTADYPNYDKLLRLTQLEKDWGLLEDRK----A
IERLQGWQKCLEEHCATIKGYQILWR
>gi|284050153|ref|ZP_06380363.1/1-476
RIERHKAAIIRKSLSRPVRLALEAGLFREN-SSFFDYGCGYGGDLKQISDRGYLSAGWDPYYSPETPQVVSEIVNLGYVI
NVIECQVERREALIRAWELTQRVLIVAAQILIDDCD-RGIIAYGDGVITNRNTFQKYYQQEELKIYIDQVLNVDSIPIDL
GVYVVFRDESEAEDFRASRFRSRVSSPRICA-QVK---------RFEEYQELLQPLIEFLCDRGRLPVGAELQQTSE--I
EAEFGTIKRA--FKVIMQATNSP---EWEQVADRRRQDLLVYLALSHFGKRRKLSDLSEQVKNDIKGLFGSYKKACALAD
VMLYSMGNPDIIAECCYNS----DIGQKRQN-SLWVHISALEKLDPLLRVYEGCAHRTIGRLEG-TTLIKFHIKTPKITY
LFYPDFDTNPHPVLQTKMAIDLRDLQVSYRSYQGA-NAPILYAKEAFVTPDYPSYEKFAKLTSQEQDWGLLDDKS----A
IQTLGGWLKCLEEHCAEIRGHRVYWR
>gi|113474489|ref|YP_720550.1|/1-478
QIKRHKAAIVRKQISKPVRLAIEANLFTEG-RTFFDYGCGYGEDIKYIAKKGYLSAGWDPYYLPETPCIAADIVNLGYVI
NVIESLTERREALIKSWGLTKQILIVSAMVLIDDSKTEGKLAYGDGIITARKTFQKYYEQEELKSYIDQVLNVDSIPIDL
GIFFVFKDEAEAQNFRASRLKSRLLTPRISC-KNK---------RFEDYEEQLIPLMNFMSDRGRLPFRGELVEETD--L
IAEFGTFRRA--FQVIMQVTNYQ---EWDEITDKRRQDLLVYIALTKFGNRPKFSQLSVVVRNDIKALFGSYTKACTLGD
LMLFSLGNSDLISKCCKNS----FIGYKYTN-SLLVHISAVPKLDPLLRLYEGCANRTIGRLNE-ATIVKFYYKLPIISY
LFYPDFDTEAHPVLRTRMNIDLRDLSVSYEDYKNEYNPPILHRKDALVTSDYPHYEKFTKLTLQEEDRGLLNNLK----Q
IQNRLGWLKCLEENFAEIKGHRVYWR
>gi|254415155|ref|ZP_05028917.1/1-477
EIERHRAAIVRTNLSKPVRLALESAILTKD-TSFFDYGCGRGSDINRLRRQDYTCTGWDPYYHGGNSLVPSDIVNLGYVI
NVIEKPGERRQALLKAWELTQKVLIVSAQVLIDDRS-SGQIAYGDGIVTRRNTFQKYYEQEELKAYIDQVLGVDAIPVDL
GIYFIFRDSTQAESFRASRFRSRTITPRIRV-SVK---------RFEDYKDMLAPLMAFITERGRLPSPLELANTEE--I
LEEFGTLRRA--FKVILQVTEQN---EWDAIADKRRHDFLVYLALAKFNGRPKFGQLDPLVQNDIRAFFGNYQQACAAAD
LILLSVGNPGLIANCCKRS----PVGKLLPS-ALYVHVSALEALEAPLRLYEGCASRTVGRLEG-ATLVKFHINQPKISY
LFYPNFDTEPHPELHTSMNIDLQDLQVTYRHYDASRNPPVLHRKETFVTPDYPLYEKFAKLTRQEEDWGLLDNTQ----T
IGTRQGWQQCLIDNCAQLQGHRVIWR
>gi|17232024|ref|NP_488572.1|/1-477
EIERHRAAIARTEISRPVRLAIEWAILNPD-KTFFDYGCGYGGDVQRVANLGYTSTGWDPYYYPDAAINPADVVNLGYVL
NVIEDQEERRQSLIQAWELTRNVLIVAAQVLINAPS-KAQLAYSDGIVTSRNTFQKYYEQQELKKYIDEVLNVEAVPVAL
GVYFVFRDEAEKESFKAIRFFSRTSTPRVRI-PVK---------RFEDYQEQLAPLMEFFTKRGRLPVKGELATAPE--L
LGEFGNFRRA--FAVVLQATDEA---EWDAIAYRRSLDIQVYLALTHFDKRPKFSQLAPEMRHDIKAFFGSYEEACNVAD
QKLFSLGQPKVVQTACDKS----KIGKHTRG-ALYVHVSALAALDPLLRIYEGCASRTIGRVDG-ATLIKYYTDQPQISY
LFYPDFDTDPHPSLKASITIDLKTLYVTHRDYSTRANPPVLHRKETFVTPNYPLYEQFAKLTQQEQELGLLQQKS----E
IGTREGWEKCLAAHGVEIRGHEIHVI
>gi|296166205|ref|ZP_06848646.1/1-478
PVARHKTAMSRETLSRPIATALRDALLDTT-RSIFDYGCGRGDDIRNLKALGYSVGGWDPTHRPLAHRTPADTVNLGYVI
NVIEHPAERAQTLRSAWALTRRLLIVSSRLTWDGRGLAGR-PFGDGLVTRTGTFQKLYEQAELKQWIESTLNTEAHAAAP
GIYYVFRDSTAAQEFLATR--VHTYRPRVRIDPHQ---------LYEANQEVLAPLFDFLSLHGRPPRTGELDSDTIGAI
REAVGTLARA--QQLIRRVTDDD---YWEKVRIQRRAELLVYIALSRFTGRPRFAQLGYTLATDIRTHFSKYQDACAQAD
RLLLACGDPAIVLVNARSS----PVGKQTPS-ALYVHKSALGELPPVLQVYEGCARALSGTVEH-ANLVKLSVTEPQVSY
LTYPQFDRDAHPRLESSVTVNVRRLTVDWRDYRRSPNPPLLHRKEEFLGKENSRRALYAKLTRAEVRAGLYRSPE----S
IGSLMGWQATLEAANLTLRGHRLAPA
>gi|169628192|ref|YP_001701841./1-478
QVARHRTAMTRAALSRPVALAISDGVLNSS-LSVFDYGCGRGDDLRNLTALGFQTDGWDPSHRPEAALRPADIVNIGYVV
NVIDDRAERRETLQRAWNLAKQVLVVSARLVWEARDLEGR-PYADGLVTRTGTFQKFYEQAELAAWIEESLGVKPVAAAP
GIFYVFRDAARAHEFLATR--AYTYRPRMRADPHA---------VYETHKQTLAPLLDFLSMHARSPRSGELEESAEVQI
RDQFSSIASA--TNLIRQVTDDD---YWDDVRLQRRQEMLVYIAMSRFGRRPRFSELAKTLAADIKTHLGKYSDACLQAD
RLLLATGDPAIVLVSARSS----SVGKQTPS-ALYVHRSALGHLPPVLRVYEACGRVLAGTVEH-ANMVKLSVKEPQVSY
LTYPDFDRDPHPTLRSAVTVNLRRLSVDWRDYSRSENPPLLHRKEEFVGPDHPKRSLYERLTRAEVNAGLYAHPE----R
IGTLIGWQSTMHAAGVSVRGHRLVLR
>gi|289768369|ref|ZP_06527747.1/1-470
GSDRRLTAISRGGLSVPARQAVVDGQILPG-SAVLDYGCGRGEDVRALEHMGCEAAGWDPFYQPDVRLEPCPVVLLTYVL
NVIEDPSERRRTLQRAWELASTVLIVSARLTWERSKVSGE-EFGDGLLTRRNTFQHLYGTRELRTYVEEVTGVRAVSASP
GIIYAFKDDTARLSYLARRIIADDHWL-----------------ASDDRTSAIAALVDHVERRGRPPRLEEMPLPTA---
-QLLGHLRPSEVNRLVRESADPA---KVDEGAKRTTLNTLLFLAVELFNGRGPFTSLPLTVQLDIRAFFSSYKEACQRAD
RLLLKLRDDTYVRGAMNAS----AVGKLTPT-ALYVHRRAMERMPTVLRLYEHCASIAAGRPQT-WTVVKLCHRGRAVSW
LDYPDFDRAPHPRLLTSYQVDLTTFETSHHSYGSRENRPLLHRKHEFLHPDDPDAAKYRRLTEAEVRAGLYAHPH----L
IGTENGWESELARCGRALRGHRLIRA