HMM Seed Alignment: TIGR04001

Download Alignment

>OMNI|MXAN_6194/9-246
GIDVLAFGPHPDDVELFCGGLLASMAARGYRTGIVDLTRGEKSSRGTLQSRAEETEAATRALGLAHRENLELPDGWLNPW
AGFDTPEP--ERARTAAVARVVEALRRLRPELVVVPWEQERHPDHEAASALVTRALFFAGVRKFDAE----PAAEPFTPR
QVLYYPMRHLTE--PSVIVDVSAVYERKLAAVHCYASQVLPRP-----DAPPTLVGS--PLSVSSLEARDRFHGAQIGVT
HGEPY-ILREALGL
>OMNI|NTL03HM1978/6-235
SADVLAIGAHPDDVELGAGGAVALAASQGLQVVIADLTEGEMASRGTVAERCAEAKQAAAILGVRERINCRWEDG-----
-GLGDPAKWRKRVE-----ELAHLVRRYRPRLVLAPEGPDRHPDHEAAGRLAREAVFYSGLQKYGDP-----DLAPWRPR
RFLAYRVNGIFDGAASFGVDVSDVYDRKRAALASYRSQFFREQ-----PNARQALHI--PDLPALLEARDRYLGGLLGVA
FAEPL-YAEGPIRL
>OMNI|BA_1557/3-225
GLHILAFGAHADDVEIGMAGTIAKYTKQGYEVGICDLTEADLSSNGTIELRKEEAKAAARIMGVKTRLNLAMPDR-----
-GL-YMKE--EYIR-----EIVKVIRTYKPKLVFAPYYEDRHPDHANCAKLVEEAIFSAGIRKYMPE------VPPHRVE
SFYHYMINGFHK--PNFCIDISEYVSQKVEALEAYESQFSTGS-----DGVKTPLTE--G-YVETVVAREKMFGKEVGVL
YAEGF-MSKKPVLL
>OMNI|NTL04BL2271/1-225
MLDILAFGAHSDDVEIGMGGTIAKYTKKGFQIGICDLTQAELSSNGTVETRKSEAALAAEILGASPRISLTLPDR-----
-GL-FPSQ--AAIR-----DVVAVIRKHKPKLVFVPYPKDRHPDHGHAAEIVEEAVFSAGIHKYEDA----EKQPAHKVQ
NVYYYMINGFHK--PEFVIDISETINQKKDGLAAYQSQFTRSR-----QSVETPLTN--G-YIETVEAREKLLGKEVGVA
YAEGF-FSKRTLLL
>OMNI|NTL06BP1976/3-227
RLDILAFGAHSDDVEIGMGGTIAKYVKKGARVGICDLTQAELSSNGTVESRQEEAKAAAAILGVSTRIQLTLPDR-----
-GL-YVND--EAMK-----DVASVIRTYKPKLIFAPYHQDRHPDHGHAGTLVEEAAFSAGIHKFEDS----YKQPAHKVS
QMYYYMINGHHR--PDFVIDISEEMHQKIDSLHAYQSQFVKSA-----NSVETPLVN--G-YIDFVKMRESMYGREVNKA
YAEGF-ITKKPLLI
>OMNI|NTL01GK2183/4-228
TCDLLAFGAHPDDVEIGMGGTIAKYVRRGYRIVICDLTQAELSSNGTVDERQREAAEAARRLGVSERFNLGLPDR-----
-GL-YVEE--EAIR-----QIAAVIRRYRPRLVFAPYWEDRHPDHGRCARLVEEAVFSAGIRRYGAG----ELGDAHRVR
AVYYYMINAFCR--PHFLIDISETINDKLDSLRAYESQFQKRP-----GSVDTPLTN--G-YIEMIESRERWFGQQIGAA
YAEGF-LTKTPIHL
>OMNI|NTL01BH1685/3-226
KLDILAFGAHPDDVEIGMGATLYHYRQKGHRVGICNLTKAELSSNGTVEQRQKEAADASRILGIDERIQLDLPDR-----
-GLRNPSE--QQVR-----NIVSVIRHCQPTFVFVPYPVDRHPDHGHCAELVKEAVFNARIRNYKAE------GGAHHVQ
DLFYYMINSFER--PDLLVDVSHCYEVKQAALNAYKSQFTKSK-----ASVDTPLTN--G-YLEAVEARERLYGKEAGAM
YAEGF-KLDKPFVV
>OMNI|NTL03BC2063/4-224
TVDILACGAHPDDIEIGMGGTVATYIQKGYNVAFLTLTLAELSSNGDIASRQQEAKAAAEQLGVRARYQLELPDR-----
-GLTYIGE--EKLE-----EVVDIIRLTRPTLVFMP-AADRHPDHGQCGALIKEAIFNAGIRRYGN-------GEPHKVK
AAYSYFINGFAK--PDFVVDVTDNHSAKVAALQAYKSQFVAQ------GGVQTPLTD--G-YIEAVIARDRLFGKEVGVA
LAEGF-VAEKPLVM
>OMNI|CHY_1133/3-227
KVDFLAFGAHPDDIECGIGGTIAKLTRLGYKVGLVDLTLGEMATNGTIEQRQDEAYKAMEILGASFRINLEIPDR-----
-GI-NLTP--ENIE-----KVVEILRKAQPKVIAAPYWVDRHPDHERAGSLVKEGFFSAGLNKVLPE-----IKPIKRPE
KYLRYFLTISAT--PSFVVDVTEYYSIKKRAVLAHVSQFAHRP-----EFSQTFLNE--GQFLGRIESRDLFFGAQIGKR
YGEGF-VLQELLEL
>OMNI|NTL01DR2320/6-231
KIDVLAIGAHPDDIEAGAGGLVAKFVQQGLSVGLLDLTAGEMSTNGTPEERQKEAQGAAQVLGVTWRKCLGLPDR-----
-EI-TLIK--KNVK-----ALVEVIRQSRPRLILCPYWEDRHPDHVNAARLTIEAHFDAGLKKVCDH------LLPHRAS
HLWHYFLSRATE--PQFVVDVSHCYEIKRAAIMAHKTQFGQGR-----DIQKTFLNAGPGSFLSIIESRDCYYGSLMGCQ
YGEGF-ITAIPLAI
>OMNI|NTL01FJ4715/2-231
KLDILAFGAHPDDVELGCAGTILKEVSLGKKVGIVDLTRGELGTRGTAEIRDEEAKDAAKILGVLVRENLAMRDG-----
-FF-VNDE--KHQL-----EVIKMIRKYKPEIVLCNAIDDRHIDHGKGSRLVSDACFLSGLMKIETS-IDGENQEAWRPK
VVYHYIQWKNIT--PDFVVDITGFEEKKIEAVMAYKTQFYDPNS----KEPSTPITS--KNFFESLNYRAQDLGRLVGKD
FAEGF-TVERCLAV
>OMNI|NTL02CH1753/4-236
KVDILVLAAHPDDAELACSGTILNQIALGRKVAVVDLTRGELGTRGTAEIRAQESAAATELLGLTARFNAGFADG-----
-FF-ESDK--EHCV-----TLAKYIRHFQPEIVLCNALHDRHPDHGNGSELQSRACFLSGLIKIETE-WEGNKQEAWRPK
NVYHYIQDRYIQ--PDFIVDISKHWDKKMECILAFKSQFYTPETSGN-NEPQTYISG--KSFLRSIESRAREFGHAIGVE
YGEGF-TKEKQLGV
>OMNI|NTL03CC1572/7-237
PLYALAFGAHPDDVELSCGATLLKIMREGKSVAVCDLTRGEMGTLGTPESRKAEAEAATALMGYSARTTLDLGDG-----
-KL-HYCD--ENLD-----RIISVIRHFRPSVVFANPPDERHPDHIKASRLVTDACYYAGLRQRPTT-FEGTLQEPHRPR
HLLYYIQFRHLE--PHVVVNVSETFEASRHAILAFASQFYREGMS---DAPQTMINR--PEFLTSLEARARYFGEQIGVL
YGEGF-RLSAMQGV
>OMNI|NTL03PL1386/9-239
RVYALAFGAHPDDVELSCGATLLKIMGEGSKVAVCDLTRGEMGTLGTPETRRKEAAEAAKAMGYRERVQLDLGDS-----
-KL-FYNE--ENLH-----AVIAVIRRFRPQAVFCNPAEERHPDHVKASKLVTDACYYSGLRQLKTT-DGGTPQEPHRPR
HIFHYIQFRDLA--PDMIVDVSDTFEASRHGLLSFTSQFWQEGES---GSPATLIKR--KEFLSGLEARARALGEQIGAQ
YGEGL-IETTTPAV
>OMNI|CT_1419/9-239
PVYALAFGAHPDDVELACGATLLKIMDEGKPVAVCDLTAGEMGTLGTAETRRQEAALATERMGYVAREQLDLGDS-----
-EL-FYTK--ESLH-----KIIRIIRKYRPDTVFCNPPDERHPDHMKASRLIYEACYYAGLRKIETF-DGGLPQAAHRPR
HLLYYIQFKQLE--PQIVVDVSSTFERSRAGIEAFGTQFHRKENS---DEPVTMINR--KEFLPGLEARSRALGEQIGVM
YGEGF-RLPTALGI
>OMNI|SRU_0934/3-238
TLDVLAFAAHPDDVELCAGGTVCLLAQQGYDVGIVDFTKGQLGSRGTPQQRMEEAERASDIIGLSARENLGLMDG-----
-DI-RNTK--ANQR-----RVIEAVRRYRPDIVLLNAPESRHPDHSDAADLSTDALYYSGLQEIETTGPDGTPQAPWRPH
HVLHYMQAVSFE--PTMVVDVTDVWDQRIEALQAFASQFHNPDYEPDPDEPETFVSN--PEFFEWVKSRARTYGYTVGAT
YGEPFKYRHGPFGV