HMM Seed Alignment: TIGR03968

Download Alignment

>gi|111023033/9-198
SRIGRRPSTTQDRISTVGIELFTEQGFDATSVDEVAEASGIARRTLFRYFPSKNAIPWGDFDAHLAEMRAQLAAQPDDIP
IVDGLTAALLQFNAFPASEEINHRKRMGLILRVPALQAYSVVMYEGWRNVIAEYVASRLGTSPTDHVPRTVGYLLLGVAM
SAYEQWLD-DDSLELNELLASGMQSLYDGLS
>gi|226305285/9-198
ARIGRRPSTTREGISTIGIELFSTVGFNEVSVDQIADAAGIARRTFFRYFPSKNAVPWGDFDGHLDEMREHLDSLPADIP
LVDALESALLTFNTFPPEETAVHRKRMELILEVPTLQAYSVVMYEGWRQVVADYVARRMNLEPTDHGPRTVGYLLLGVAM
SAYEQWLT-DDSLELPELLKTGTQSLRTGIT
>gi|227105816/17-206
SAAGRRPLTSRAQISTIAIDLFTERGFDETSVDDIAEAAGIARRTLFRYYPSKNAVPWGDFDGHLAQMRELLARIPSDLS
IADALQMALVSFNRVPPTERDSHRRRMALLLGVPALQAHSMLMYAEWRHVIADFCAARLGLDEHDHLPQTIGWLCLGTAL
AAYEAWLA-DPGSDLENLITVGARTLAQGVA
>gi|224989084/5-194
SRVGRRRSTTPHHISDVAIELFAAHGFTDVSVDDIARAAGIARRTLFRYYASKNAIPWGDFSTHLAQLQGLLDNIDSRIQ
LRDALRAALLAFNTFDESETIRHRKRMRVILQTPELQAYSMTMYAGWREVIAKFVARRSGGKTTDFMPQTVAWTMLGVAL
SAYEHWLR-DESVSLTEALGAAFDVVGAGLD
>gi|118472856/5-194
SRAGRRRSTTQDHIAGVAIDLFAARGFDAVSVDDVAAAAGISRRTLFRYYASKSAIPWGDFDSHLQHLQNLLRTLSSEVS
LGDALREALLTFNTYADHEMAEHRQRMRVILETEELQAYSMTMYAGWRTVIAEYVADRLGMSTTDLMPQTVAWLMLGVAL
SAYENWLA-DESVSLRGAIAAAFEVARPGLD
>gi|126433634/7-196
PRVGRRRSTTQDHITDVALDMFAARGFDEVSVDDVAAAAGIARRTLFRYYSSKSAIPWGDFDAHLEHMRHLFDDLDPTVP
VDEALRAALLAFNHFDAAETARHRQRMRVILQTDALQAYSMTMYAGWRAVIAQFVADRIGVKAHDLVPQTVAWTMLGVAL
SAYEQWLA-DEAVSLAQALGDAFDTVRDGLR
>gi|169630916/6-195
ARVGRRPSTTRDEITAVAMTLFAQHGFDEVSVDDIAAAAGIARRTVFRYYSSKNAIVWGDFDSHLGVMRALLDETADTVD
TSTALRQAVLTFNDFPVDETPRHRMRMRMILEVPALQAYSMLMYTGWRDVIAQFVARRSGTDPGSLLPQTVAWTLLGVAL
AAYEQWLA-DESSKLTTLLGKGFDAAEVGLR
>gi|111223716/6-195
RRTGRRPATSAAELEHLALQIFTERGFEETTVDDIARAAGIGRRTFFRYFASKNDVPWGDFDGQLEVMRASLASAAAGEP
TVAVLRRAILDFNTYPPAEGAWLRRRMTLILRTPALQAHSTLRYASWRGVLAEFVARRVGQPADALTPQAVAAAHLGVAV
TAYEQWLR-EEGTDLVAILDEALGLLATGFA
>gi|228874467/17-206
RRPGRQPASSRTEIEHAAFRLFDERGFEQTTVDDIAGAAGIARRTFFSYFASKNDVPWGSFDRELDYLRAVLDQTPDSVP
VMEAIRRAVLAFNTVDPAEQPWHRKRLALILSTPALQAHSTLRYAQWRQVVCEFVARRLVAPVGSLLVQTIGYASLAAAI
AAYDVWLT-QDDADLLDLLDTAFRDLADGFA
>gi|227958148/13-203
TVMGRPRVTSRATLEARAFELFARKGFEETTVDDIAAAAGIGRRTFFRYCASKNDLVWGDFEGHLLKLRRLLEEADPTLP
TMEVLRRAVVEFNRFDPRDVPWHRQRMELILKVPTLQADATLRYASWRAVIAEFVASRTGLPPSAMTPRLAGHVLLAAAV
AAYEHWLSGDGDAELAELLDKAIRRVSAGLS
>gi|228878718/19-208
AAPGRPAATSRGELERICLEIFSERGFEVTSVDEIAAAAGIGRRTFFRYFKSKNDAVWGEFDSQLAAFAHWFAHCPPELT
VVQAIRAAVIDFNSFDRPATESLRTRMRLILSSPSLQAYSTLHYAAWRDVVARFAAGRLGLDPDDLIPRTLGHLALGAAL
SAYEQWLA-DDGAELIELLHQSLALLGSPDG
>gi|158315008/16-205
RPKGRPPVTDHAAIERAAFVVFTERGFDATTLDAIAEAAGVGRRTLLRYYPSKNDIPWGQFDESLLDLQKSLAAMPRDIP
VHVAVHRAVLAFNHVGPDAVAQHRQRMTLLLRTPTLQAHSALKYRRWREVIASYVAERHGLIADDLLPRTVGQVTLALAL
SAYEQWLE-HEDRTIGEILDEALRGLRGYFT
>gi|54025179/4-193
TRAGRPRGTTKRDLELIAMRLFTEQGFDNTTVEHIAAAAGISGRTFFRYFPSKAEVLWHQFDAEVDALRTAFATVPDELP
MMTAVRRVVVNANTYRAEDVAELRTRMHLVATVPALAATAGPHYDAWERAVSAFAARRLGEPEDALVPLAVGRTTLAAAR
AAFDAWLR-NADADLTVYLDQALSALERGFA
>gi|158315129/7-196
DRRGRPRGTSARKLELIALRLFAEQGYHETTVDQIAAAAGVSRRTFFRYFDAKSQVLWNEFDNEVTTIRANLQQTSGGLP
VMDAVRHAVIAANYYRAEDVPELRMRMHLISTVPELVASATVHYDAWERAITEFVARRTDQPADSLYPLAVGRATLAVCR
AAYERWST-HADADLTLYLDAALRALAAGFR
>gi|227096627/3-192
EAPVDVRADTRARVQQAALELFTLNGFEQVTADDIAEAAGISRRTFFRCFATKADAVWGEFGAHVDRLERLLAATRDDQP
VLASICGAYVEVNDYAAEDLPILRQRMALILGEPALQAHSQVRYADVDRVVAEHVARRTGQSPAALLPRLVATSTRAAAT
TAFEVWLA-DGTTTLAADLHAAFDQLALGFP