HMM Seed Alignment: TIGR03964

Download Alignment

>gi|158315010/18-260
LSGQAWTDIAGRPL-----VLVPVGSFEQHGPHLPLVTDTTIAVAVAEGAARLLLRRRPAEPVLVAPPLTYTASGEHQSF
AGTISIGGPVLHLVLVELIRSMSAWAGPVVFVNAHGGNLRGLTDAVTQLREERHDVAWVPCAATGTADTARACSAAGDAH
AGFTETSLMLHLAPDQVDMTRAAAGNTTSLDELLPALVTGGLAAVAPSGVLGDPTAATAQDGERILRRMVGDVCELIHDG
EAGADGRL
>gi|134098955/5-234
LAEQAWPDLEGRRP----LVIVPFGSCEQHGPHLPLDTDSSIATAVAWKGVRELAD---GTDVLLAPTQHYTASGEHEGF
PGTVSIGCDALHLLVVELGRSLSGWCGRVLIVNGHGGNNAVLAKAVAQLRDERREVAWWPCAVQG-----------GDAH
AGRTETSMMMALRPLSVREDRARAGRTEPVRKLMGELERNSVRAVSPNGVLGDPGGASAAAGERLLNRMAAELCTAVHSW
NVRAGRLL
>gi|227096636/13-238
LAGATWPDLPERPL-----LLVPLGAVEQHGHHLPLGTDTSVACAVAEAAVDDLDG------VLLAPALAYGASGEHEDF
PGTVSIGTEALTGLLVEYGRSACRWAGRLVLVNGHGGNLDALRTAGTQLRAEAREVAWFPCGVAG-----------ADAH
AGRTETSAMLHVEPDAVRADRAVAGDPTPIAELLPRLRAEGVRAVSPTGVLGDPAGASAEEGAELLAGMAGRLAAAVRAW
DVDPTGRL
>gi|118465285/15-242
LGTVTSSQLSGTAV----SLLVPLGSTEQHGPHLPLDTDTRIASAVAGRAAPRLGD-----GWLVAPAIAYGASGEHQSF
AGTVSIGTEALTLLLIEYGRSAAGWAQRVVFVNGHGGNVAALGRAVGTLRAEGRDAGWCPCVAAG-----------GDAH
AGHTETSVLLHISPAEVRTGQWQAGNRAPLPELLGSMRRGGVAAVSPVGVLGDPTTATAAEGERILSEMVNECVRRVARW
RPGPDGML
>gi|126433638/7-234
LGNSTSRQLRSTSA----ALIVPVGSTEQHGPHLPLDTDTRIATAVAREVAGTLTP-----SWSLAPAVGYGASGEHESF
PGTISIGTAALRLLLVEFGRSATNWASRVVFLNGHGGNTEALAGATALLRYEDRDVAWCPCIAKD-----------SDAH
AGHTETSVLLHISPDDVHTDHWERGNTAPLRDLMPALRQGGVAAVSEVGVLGDPTTATGADGARLFGEMVRHCADRIARW
APDRNGML
>gi|145225634/15-250
LGNSTSRQLHDAHAIHMPTLVVPVGSTEQHGPHLPLDTDTRIATAVADAVVTRLRA-RDETHWVMAPAIAYGASGEHEGF
PGTISIGTPALAELLVEFVRSACRWTPRVAFVNGHGGNVDALRRAVTQLRHEGRDAAWSPCVAGN-----------ADAH
AGHTETSVLLHLSPDAVRQEERVPGNRAPLAELMPQMLRGGVAAVSSLGVLGDPTTATADEGRRIFAEMVDACAARVVRW
EPDRGGML
>gi|169630912/15-247
LSTAISPELSDEAI----TLFTPLGSTEQHGPHLPLDTDTRIAGAVATGAAAELAADGGDGRTALAPAIAYGASGEHQSF
AGTISIGTEVLGRLLVEYARSAIQWCRRIVIVNGHGGNIQGLVSAVRLLRSEGRDVAWWACAVEG-----------GDAH
AGHVETSLLLHISPDVVRREEVLAGNVAPLHELMAPMRAGGVAAVSAIGVLGDPTTASSQDGARMLETMTRQCADAVRRW
TPDADGRL
>gi|227105809/7-236
LGQQCWPDLDGRSV----TVLVPLGALEQHGPHLPLDTDTRIATAVVDGVRGHGDA-----TLYRAPELAYGASGEHEGF
PGTVSIGHEALYQVLLEYGRSACRWADRLVFVNGHGGNGPTLRSAVTRLRYEGRDVAWFPCVFDG---------ARADAH
AGYTETSVLLSLSPQLVRQDRLEAGNRASVATLLPAMREGGVAAVSANGVLGDPTTASAEDGTRLLAATIARCEAALDAW
NVDEQGRL
>gi|111023040/7-229
LDDAVWPELVSRVS----TVVVPVGSLEQHGPHLPLDTDTAIADAVCRALPH----------VLVAPPIAYGASGEHEGF
PGTVSLGSEALETVLVEYGRSACRWADRVLFVNGHGGNGPALVKAVALLRYEARDVAWVPCAVPG-----------ADAH
AGRTETSLLLHLSPARVRLSRAEAGNTEPVARLMPRLREGGMVAVSANGVLGDPTGATAAEGAQIFGVLVHAVTKALARW
EPGPDGRL
>gi|54025178/2-230
MADITSPEAGAYAA-AGVILAIPFGATEQHGPHLPLSTDTDIAVALCAELAARRGD------VLVAPPVPYGSSGEHAGF
PGTLSIGQRALELLVVELCRSATDTFARILLVSGHGGNLEPLHRAQALLRSESRDVRVYLPRWRG------------DAH
AGRAETALQLALTPHRVRMDRAEPGDTRPLPEILPLLRAGGVRAVSGNGVLGDPTGADAEHGRALLAALGDDLFDKTRHW
WPETTQER
>gi|228878715/17-242
LAAATWPEVDRSPR---RVLLLPLGSTEQHGPHLPLSTDTVIATRLAQWAHARRPE------VGLAPVMPYGASGEHAHF
PGTLSIGTEALATVLIEFVRHAAGSWRHVLVVNGHGGNADALRRAVEVSRYEGRSLHVHHAASAG---------PRADPH
AGDRETSLMLHLDPDRVRMDRAVPGQTAPIAELMPRISTDGIRAVSPTGVLGEPTGADAEEGRRVFAEMGGRLLATIARL
LAPD----