HMM Seed Alignment: TIGR03944
Download Alignment>gi|159036034/1-327
MLILGAREVRAVLDGAEQDVLAAVREAYELHALGRTAVPHSVFLRF-PPE--ERNRIIALPAYLG---SRTPVAGVKWVS
SFPGNLQM-GLDRASAAMILNSTRTGLPEAFLEASAISAQRTAASAALAAATLGSS-D-PESGVSQIGCGPISFEVLRYL
QV-VKPELDRVTLYDLDRARAESFAGRASAVWPQL-KVEVAERVEDALAAHKLVALATTASVPHL-DGEHLRPGALVLHL
SLRDLSAETIQASVN-IVDDADHVCRAATSLQLAEQRSG-GRDFIAASLGEILVAGHRYTRDDTTPTVFSPFGLGCLDLA
VAAMVRRVAEDRGLGTTLTGF
>gi|228875505/1-325
MLILRAHDVADALAGRELDVIDVIEQTYRAHATGRTAVPHSVFLRF-PDQ--PRERIIALPAFVG---GPHAAAGVKWVS
SFPGNVVA-GTPRASAVLVLNSLLDGRPQALLEASQLSAARTGAGAALAARTLAAG-R-PLRGAGLVGTGVINVEVLRYL
VA-VAPELTCVTVFDRDPQRAAAFAAQARELVP---TVEIADHVDQALARHDLISLATTAAEPHL-DLGACRPGALVLHI
SLRDIAVATIRNAYN-VVDDADHVCRERTSLHLAQLQTG-DRSFIGAGLGDLLTGATPLPAADGRLVIFSPFGLGALDIA
LAHYVRSRAQANGAGVEVPDF
>gi|29830188/1-329
MLILRRADVTDVLSGRETEIIDLVAETYRLHDEGQTSLPHSTFLRF-PEEHHSRDRIIGLPAYRG---GERPVAGMKWIS
SFPGNVAA-GTDRASAAVVLNSLGNGHPVAFVEGAVISAKRTAASAALAARELTAD-N-PPAAALLIGCGVINLEILRFL
AA-ALPDLREAALYDTDPARAEAFAARCAEEVPGV-KARPVTDLAAALGEHRLVSLATTAATPHM-DLSACGPDTTVLHI
SLRDLTAEAVLGAVN-VVDDADHVCRERTSLDLAQQATG-NRDFVAAPIGALLRGTATLRRTADRPVVYSPFGLGVLDLA
LAEFVREEADRRGLGVRVEDF
>gi|152074666/6-334
LLIITANEVISLLEGREQDIIQIIAEAYKTHESGESTVPHSSFLRF-PDD--KLNRIIALPAFLG---GTFNVAGIKWVA
SFPDNLKQ-GINRASATLVLNSMQTGQPEVFMDASIINGKRTAASAALAAQWLHAD-Q-KLTKVGILGCGFINFEISRFL
KV-VFPQLNQIVLYDIDLKRATLFKEKIQQQFEQIKKVSVVNDIPTLLRQTELVSLATTVGTPYLADISSLQPGSTILNV
SLRDITPKVILQCDN-ITDDIDHVCRAQTSPHLAEQQVG-NRHFIRCSLGSILLGEQPARKAKTDISIFSPFGLGILDIA
LAQLVSKLAKETEKGVKVPSF
>gi|159898388/5-331
LTLLKGHEVGRILDGAELTLIDLVRVAYEAHQAGLSSLPHSSFLRF-PND--PLNRIIALPAYLG---GAQPSAGIKWIA
SFPGNLSH-GIQRANATITLNDPQTGLPIAFMEGAQISAKRTAASAALAAKYLHSN-P-QETRVGLVGCGVINHETLRFL
LA-VFPSIREVLVFDTQPAHAEHFQAACSDQFGM--NVQVVASIEALLQRTSLIALATTAITPHIDDLSMCAAGTTILHT
SLRDLNPRLIEFCDN-VVDDREHVLRANTSLDLAQQALG-HHHFVRCNLAEITSGQVPARPNPEQTTIFSPFGLGVLDLA
LAQWVLGQAREYTIGLTLNDF
>gi|182436384/12-337
LIFIPEAAVAAQIEGHRERCVDLVRRAYLTHDNGDSVNPQSGFLRL-PDH--PKSRIISLPAHLG---GEFGVSGLKWIS
SFPDNPRTYGIPRASAVLLLNDPDTGYPAACLESSVISATRTAASAVLAAETLGGG-R-SARRVGVVGTGLIARHVWKFL
RD-LDWQIDGFTLYDLDPAAARSFGEELTAEGAK--EFTVADDVAQAFTECDLVILTTVAGEPHIHDPKLLDHAPLVLHL
SLRDLAPEMILAAQN-ITDDTEHAVRERTSLHLTEQAEN-GRDFITGTLADVLLGRV--EVDRSRPVVFSPFGLGVLDLA
VGSWVHSRAQEAGAGRVVNDF
>gi|225872799/355-681
MLMLRGEEIIQLLEHREHEIIQSIRDAYITRESGGYSLPNCEYLRF-PGN--TVDRIIPKPAYLG---GPFQAAGIKWVA
SFPGNLQV-RLERASATLILNSVKTGFAEVMMEGSVISSYRTAASAALAADVLHAG-K-STSTLGLIGCGPINFQVLRFL
LY-TRPEVRDILLYDSDPCRTSQFEACCRSLCDGR-TVTRATRGQHVLEQASIVSIATNAVTPHIDNFAGRGNDLTLLHI
SLRDLTPQAIGQADN-IVDDIDHVCSNDTSLDLAARSLG-HRHFIRATLGEVLVGKQL-PRSGVGPLVFSPFGLGILDIA
IGCLVRDLAAAAHAGTAIEDF
>gi|134100814/7-333
FTVISGAEVQNSLDGRQKQVVDIVEAAYRLHGEERTVNPPSYFLRF-PER--PTSRIIALPASLG---GDSAVDGIKWIS
SFPGNVAA-GIPRASAVLVLNDHDTGYPFACLESSVISATRTAASAALAADRLTRDRG-RPRRVGFFGVGLIARYLHDYL
QA-TGWSFDEIGVHDLSAEHADGFRGYLERAESGP-RITVHDSAEELIRSSDLVVFATVAGTPHVHDPAWFEHNPLVLHV
SLRDLSPEIILSAVN-VVDDVEHCLKADTSPHLAEQRTG-NRDFLDGTINDVLCGRL--SVPADRPVVFSPFGLGVLDLA
VGKFVYDEVTRNGHPTVVPDF
>gi|50842770/7-323
MLIIDAKLVETFLKGRESFLIDLVERVYRAHHAGNTVCPDSYFLRF-PDT--PRDRIIALPSYIN---DQTCVSGIKWIS
SFPENVDH-GLQRASAVIVLNNTDNGYAYAFIEASRISAARTAASAALAVRVLHGA----PTSIGVVGSGPIAQTTLHFI
KS-LYTTAVPVKIHDLNSELVARIVTRH--------GPECSVVSLEEALGCDLVLLATSAGTPYVPMSVRFQPNQLVLNI
SLRDLHPETIRTANN-VFDDVEHCLKANTTPHLLEQLNG-NRNFITGTLAEFICSEK--QLDPDHPTVFSPFGLGILDLA
VAQSLYEHVQISGDGLRVPDF
>gi|104781283/9-331
LSILGAAPIEAWLQANPGRLLELVAQVYLDAAEGLAGNPDSYFLRF-ADS--DRNRIIALPAVLD---DARPVAGLKWIA
SFPENTRH-GLDRASALIILNDRQTGYPLACLEGSLISAARTAASAVLGARCLHPTPG-HSAHFGVVGCGPIAWRTLCLL
HQ-SGWALEQVSLCDLDPARAERLRQRCQDLG----LRARVAPLETCIRNSDLLLFATSAVRPGIDQAHWFAHAPTVLHL
SLRDLATNVVLQAQN-LADNVSHCLKAATSLELAWLQAG-HQRFIAGDISEALRGKV--TPDPTRPRIFSPFGMGVLDLA
VARAIHHDCAAQPH-LRVTDF
>gi|224603750/5-331
LSIINGKTVSDIIRAQRDACVEIVQNAYLAHAGGHSVNPDSYFLRF-PEK--PDCRIIALPAYLG---GGFDVAGLKWIA
SFPGNVQR-GFPRASAVLVLNRYDTGYPFAILESSIISASRTAASATLAAFWLNGQSR-RARSLGIVGNGFIARYVYEFL
VD-TGWEIEEVRLYDRSPLESEKFIKTACHPERHR-RVTVAPDVEGLIRACDLIVFATVAATPHITDSALFEHNPLVLHI
SLRDLAPGILLGAQN-VVDDVEHVMKANTSPHLALQQTG-NRDFVTGTLAEVMLGKC--SVDRRRPIIFSPFGMGILDLA
VGKWVYDQAVAAGQDLRLSDF
>gi|162450660/3-329
FSIITGKVIHEIIHADIPACVERVKSAYLMHEDGQTVNPDSYFLRF-PEQ--PKNRIIALPAFLG---GDVGVSGIKWIA
SYPDNIRR-GIPRASAALLLNSYETGYPFACLESSIISAARTAGSAALAAEWMNGGKR-AVNRLSIIGNGLIARYIYDFL
LA-LGWEIGSVLLHDLNKAESQRFATQVCKPGRHG-AIDCVSSAEAAITGSDLIVLATVAGEPYILDPALFSHNPLVLNI
SLRDLAPEILLGSYN-IVDDVEHVMKANTSPHLAERLTG-GRSFVTGTLAQLMRGER--WIGRDKPAIFSPFGLGVLDLA
VGRWVYDVASARGQRVVVDDF
>gi|66045981/357-678
FHVLDGEVVARLLAADPLACIDDVQAAYLDHEAGRTINPDSYFLRF-AQA--PANRIIALPASLS---GEQPVSGIKWIS
SFPGNIDT-GLQRASAVLILNDPLTGYAFACLEASRISAMRTAASAVLAARWMSRQQR-HVGRMSFIGAGFIARTILDMF
VS-DGWTMDAVSVFDQHQDSALALVGHASRH-----GLHSEPSDLATCLQADVVVFATTAPSPYVLEPV-FQPGQRVLNI
SLRDLGPEVIAQANN-ILDDVEHCLKAQTSPDLAVQQYQ-HRSFITGTLAQLMTGQV--ELSPDKASIFSPFGLGVLDLA
VGQRVYRQAVAEGSALPVPQF
>gi|157368589/8-335
FEVITGDYINKVIATSRRDIIDLVRQSYLTHHQGKTENPDSYFLRF-KNK--PEARIIALPAAIDNPEADTSVSGIKWIA
SYPRNIEA-NLQRASAVILLNDYETGYPFSCLEASQISAARTAASAVLAANHLGPAGK-NAKRLSIIGGGLIARTILAFF
KD-EGWRFDDVVIHDISAEYRDAFIKNTNLQEV---YQVRAAVDQAEALAADIVVFATTAASPHVMDERTFAPHQLVLNI
SLRDVSPEIVHAGNN-VLDDVEHCMKANTSPHLAEQKYG-HRCFINGTLAQVINGEI--TLDKTKATLFSPFGLGVLDLS
LAMFIYRCNRVAPGRHIIPDF
>gi|121608188/8-334
FHVVPGVAVKGILAELRKEAIEVVAQTYLAHERGDTINPDSYFLRF-PSE--PANRIIALPAAITDTDGDQSVSGLKWVA
SYPANIRW-GIPRASAVLILNDSRTGYPYAILEGALISAQRTAASAVLGARWLNGPQK-NIHRLSIVGGGVISRNILETF
MI-DGWSFESVGVHDLDDASAKALSAFGGQIG----LPDVQILSLEEALTADIVVFATSAGTPYVIESGTFRAGQIVLNI
SLRDISAEIIAESYN-YFDDVTHCLKANTSPHLAEQKYG-HREFVTGTVAAMIRGDI--RPAKDKPLIYSPFGMGILDLA
IGRMVYEIAIKDGSAIAIPSF
>gi|220926694/6-336
LRYLSRTDIVALGGDHSDLYMQAVEDGFRLHASGDFVQPLKPYLRS-PRTRHIADRIIAMPAWIG---GKHPIAGLKWIG
SKHDNPAVRGLERASAVIVLNDSETHFPVAILEAGLISAMRTAAVTGVAIRNLARR---NFSDAAIIGCGPIGERQARML
AE-QFSSLRTLRLFDLRRPAAEDLSARLSDRFPRL-GIEISGSAEAAVRDAAVVITCTVTDTPYL-PFRWLARGTLLANV
SIMDVERDVFLKSDKVIVDDWDQSNREKKIINLLVEEGVFSRDKLHAELGEIVVGRKPGRESDDEIILLNPMGMAVDDIV
CARAVLHRAEERGAGTLLPLF
>gi|83726204/9-339
LLYLGRQDLVALGGDRSQPYVDAITEGLALHAKQDFVQPLKPYLRW-PGADHIADRIIAMPCYVG---GKKPIAGLKWIG
SRQHNPSRFQLERASAVIVLNDADTNYPVAIMEGGLISGMRTAAISAVATRHLARE---GFTDVACIGCGPIARMQMQTL
IE-QFPGIRRVHLFDVSREAMRGFSEAIAARFPQV-ACQAADSAEQAVRAADVIVTCTVTDAPYL-EFAWLRRGAFVCNV
SIMDVHKEVYEKADKVVVDDWDQSNREKKIINQLVLEGRFSRERLHAELGEIVVGERPGRENDDEIILLNPMGMAIDDMV
CARHFYQLAEQAGVGTRLPLL
>gi|169007945/1-322
MIYLNERDLAKIGIDWP-ALAELIGDAVAAYAAGECAQPIKPYLKY-GDE---RNRIIAMPAFVS---RPVRAAGLKWIA
SFPGNIEN-GLPRANSVTILNDPDTGVPVAMVQGSLISAIRTAAVSGAMLRKLVAERE-GPLQVALIGMGPIGRMHVHML
NGLLGDRISRISVFDHRNVEVEEWLKGVPAVI----PVEKAASWQEAYRGADVVFTCTAAPERYIDEPA--KPDAILMHV
SLRDYQLEALSNVGTIIVDSWEEICRADTDTERLHLHAG-LRAEDTLTLADALAIPLDRIIRPAGPTLFTPMGLAIFDVA
VAAYYAEAAKRLGVGLKLE--
>gi|91791951/7-337
LRYLSQSDIRLLGGDHSHAFMSAIEEGLRLHAKRQFVQPLKPYLRW-PDAPHIADRIIAMPCYLG---GDNPIAGIKWIG
SRQHNPTKHQLPRASAVIILNDAETNYPVAILEASLISAMRTAAITGIATKYLAKE---NFKEVSIIGCGPIAQMQVQTL
LE-QYPQIMIVNLYDLNPAAADMLISQFATRFPNV-HFTIQASAEAAVKCAEVLVTCTVSDAPYI-PFSWLQPGCFVSNI
SIMDIEKDVFLKADKVIVDDWDQSNREKKVINQLVEEGLFSREQLHAELGDILTGEVGGRDNDDEIILLNPMGMAIDDIV
CARWFYQAALAKDIGTRLPLF
>gi|119461155/5-332
TLLLTQGDLQQCGAADIEVVGKALEDCFVAHEAGQFTAPPSSFLKR-PECPHVADRIIGLAGHLG---GSFDIEGLKWIA
SAHQNPAR-GLPRANAVIVLNDPDTRLPLAIMEGGLISAMRTAVVQALAARYLARP---DSTVLGLVGAGRIGALSVWAI
CQ-WFPGLRDIRVFDLSEARAEACCQHLQKLGL---AATTVSNFEAALAPADIALTATTAYEPWA-TPACFKSGSLFLNV
SLMDPVFETVSLADKIVVDDWEQCIHSDRVLARMHRAGLVDRESVHAEFGEIITGNKLGREHADERIFFNPFGLAIEDLA
VAKVVYDRAVKAGLGTPIHLV
>gi|226312776/1-322
MLYLNTSDIEKVGKNWK-ETIDVIEHAVHSLYKEDYAQPVKPYLRY-HD---MANRIIAMPAFVG---GDTYMAGIKWIA
SFPKNLQE-GIQRAHSITILNEARTGKPVATINTALVSGIRTASVSGLLLKHYEQVRPLQNVTVGIIGFGPIGRLHLQMV
TAMLGEKIDKVVLYDIAGIQQEHIPAEIKE------KTVIAQTWEEAYCDADVFITCTVSPHGFI-DKQ-PKRHSLLLNV
SLRDFTPKILDYTRSIIVDDWTEVCRENTDIEIMHLERG-LQKEDTKSITDIVCLNQMKEFPQDEPIMFNPMGMAIFDIA
IAAYYYKQALSQGIGTHLQD-
>gi|228783583/9-339
LIYLSKQNIIDLGGYKANIYVQAITQALTLHSERNFSQPLKPYLKTNKEGEHIADRIIAMPAYL----GEPSISGIKWIG
SKFDNPTKKNMERASALIILNDPETNFPIAILEGSVISSMRTAAVTVVAAKYLAKK---GFQNVSIIGCGLISKMHINSL
LE-QFNHIRQINLFDLDNVKAKAFAQEMKERYSHV-DFQVKESAKNAVEQAEVLVTCTVADTPYI-EADWIQKGTFVSNI
SIMDIAKEAFLKADKVIVDDWDQANREKKVINQLVVEGKFSKEMLHAELGDIITGKKLGRVTDEEIIILNPMGMAIEDIA
CAHAIYEKAKQEGLGKVLSLY
>gi|151220273/5-336
MLYLNRSDIEQAGGNHSQVYVDALTEALTAHAHNDFVQPLKPYLRQDPENGHIADRIIAMPSHIG---GEHAISGIKWIG
SKHDNPSKRNMERASGVIILNDPETNYPIAVMEASLISSMRTAAVSVIAAKHLAKK---GFKDLTIIGCGLIGDKQLQSM
LE-QFDHIERVFVYDQFSEACARFVDRWQQQRPEI-NFIATENAKEAVSNGEVVITCTVTDQPYI-EYDWLQKGAFISNI
SIMDVHKEVFIKADKVVVDDWSQCNREKKTINQLVLEGKFSKEALHAELGQLVTGDIPGREDDDEIILLNPMGMAIEDIS
SAYFIYQQAQQQNIGTTLNLY