HMM Seed Alignment: TIGR03848
Download Alignment>OMNI|NT02CA0580/15-211
TVLLIRHG-MNDWVHGRLAGWLPGVHLSEEGRRQAAALSERLGDLPITALYTSPLDRCIETARAIAEPR--------GLP
LR-IVEQIGEVRYGDWEGAELKELYKHELWPGVQHYPSGTRFPR--GETLGEAQMRMVSAIDQLRAR-----HHGELIAV
VSHADLIRLALAYYIGVHIDLFQRLVINPCSLSAIAFEPMGPRLLAYNET-GSLD
>OMNI|NTL07RS0008/3-199
VLLLVRHG-ANDMVYGRLAGRLPGVRLNEEGRRQAANLAARLADLPIDAIYSSPLDRTVETAEAIAAPR--------GLS
IR-LVEALQEVDYGEWQGAELKELYKHELWPGIQHYPSGTRFPN--GETLGETQMRIVTALDALRAR-----HPKGLIVV
VSHADAIRLATAYYIGIHIDLFQRLEVAPCSVTAIGFTRMGPRLLAYNDT-GSLS
>OMNI|NTL01FS2645/3-212
TVLLVRHG-LTAVTGKILLGWTPGVGLDDRGRRQASDLARRLADIPLAAIVSSPLDRCRQTAAAIAGRRPVSEASPGGPR
QVEIDERLGECRYGDWTGQELATLAKDPLWAVVQSHPSAVVFPGPEGEALRDTQARGVSAVREWNERL----GPDATWLL
CSHGDVIRTVVADALGMHLDMYHRITVDPCSLTVIRYNERRPFVRRINDTGGDVV
>OMNI|NTL01TF1837/11-212
TLLLVRHG-LTAATGKTLAGWTPGIHLDERGRAQAAALAQRLASLRVDAIVSSPLERCVETAQAVADTV--------GVP
VT-VDERFGECRYGEWTGRPLTELAKDDLWPVVQAYPSAARFPG--GESLAETAHRAVSAVHDYNTRLLAQ-HDTPVYLV
CSHGDVIKAILADALGLHLDQFQRIQIDPCSLSAVRYTRLRPFVLRINDVGGGTA
>OMNI|NTL02AC1169/3-203
TVIFLRHG-LTESTGRLLTGRMPGVHLDSRGLAQAADLAKRLAGIRLSAIVSSPLERCRETVQPIADQT--------GLP
IE-IEPGVIECGYGDWTGRDLRHLTKDPLWRILQTHPSSVVFPGAEGESLRAVQYRAVDAVRAWNARL----GAKAAWLC
CTHADVIRLVLADALGMHLDEFQRLIIDPCSVSIVRYTTTRPFVLRVNDTGGDLA
>OMNI|NTL02SC1580/3-206
TLILVRHGRSTANTEGLLAGWTPGVALDERGAAQAAALPGRLAGLPLSEIVTSPLQRCQETLRPLLDARP-------ELR
AH-TDERIGECHYGDWSGRKLAELGNEPLMEVVQAHPSAAAFPG--GESMRAMQTRAAEAVREWNARVERDHGPDAVYLM
CSHGDIIKSLVAEALGLHLDLFQRISVEPCSVTAIRYTRLRPFLVRLGDT-GDFA
>OMNI|NTL13ST2166/6-206
TLLLLRHGRTTANAAGGLAGRQP-VELDETGRDQAAAVGERLRLLSCATVVTSPLVRCRQTLDLALP----------EAV
PV-VEEGLTECGYGSWEGQPLKQLAKEPLWPVVQQHPSAAVFPG--GEAMATMAARAVAAVRTWDARVNEGHGPDAVWLA
CTHGDVIKAIVADALGLHLDLFQRIVVDPASVTVIRYTPLRPFLVRLNDTGGDLT
>OMNI|NTL02NS2625/3-208
TVILVRHGRTTANAAGTLTGRLPGVRLDDTGAAQAVRAAERLSGVPLAAILSSPLERCRQTAKAIATARTE------PVR
VT-TDRGITECDYGSWQGRPLEELAKEKLWSTVQTQPSAAVFPE--GEAMSAMQARAVAAVRRQDAALESEHGPGAVWVA
VSHGDVIKSVLADALGMHLDLFQRLQVDPASMSVIRYTAARPYVLATNTHAGDLS
>OMNI|NTL04CM2243/3-208
TVILVRHGRTTANATGILAGRTPGVDLDDTGREQADRAGDRLAAVPLAAVVCSPLQRCWETAQRILERQP-------GKP
AQPVDPDLTECDYGDWQGRPLSELATEDLWKTVQAHPSAVVFPG--GESMAGMQARAVAAIRRHDAEIEAEHGPGAVWVA
VSHGDVIKSILADAYGMHLDLFQRIDVGPASLSIVRYGAGRPTVHATNTDAGDLS
>OMNI|AAur_1946/3-208
TVILVRHGRTTANATGLLAGRALGVSLDQTGRDQAALTGERLAAVPVVAVVSSPLERCRQTASIILDRQA-------GTP
FAPVDPDLNECDYGQWQGRKLSELATEDLWPVVQSQPSAVVFPG--GESMAAMQARSVAAIRRHDAAFEAEFGPGAVWVA
VSHGDVIKSILADALGMHLDLFQRLNVSPASASIINYSASRPSVYATNTEAGDLE
>OMNI|NTL02MV3482/2-205
TVLLLRHGRSTSNTANTLAGRSEGVDLDDRGREQASALVDRLESLPIRAIVRSPLLRCERTVEPLAAAL--------GLQ
PL-VDDRITEVDYGAWTGRKIVELVKEPLWAVIQQQPSAAVFPE--GEGLAGVQARAVAAVREHDRRLADEHGADVLWIA
CTHGDVIKSVLADALGTHLDSFQRINADPASVSVVRYTPVRPFVIHVNHTGVALN
>OMNI|MSMEG_4193/2-205
TVILLRHGRSTSNTAHTLAGRSDGVDLDDRGREQAEGVVSRIGDLPVRAIVRSPMLRCERTIDPLATAL--------GLQ
PI-VDERLTEVDYGSWTGRKISDLLKEPLWSVVQAQPSAAVFPE--GEGLAQVQARAVAAVRERDRALAAEHGADVLWVA
CTHGDVIKAVLADALGVHLDGFQRITADPASMSVVRYTELRPFVMHINHTGPQLS
>OMNI|MT_2193/2-204
TVILLRHARSTSNTAGVLAGRS-GVDLDEKGREQATGLIDRIGDLPIRAVASSPMLRCQRTVEPLAEAL--------CLE
PL-IDDRFSEVDYGEWTGRKIGDLVDEPLWRVVQAHPSAAVFPG--GEGLAQVQTRAVAAVREHDRRLADQHGHDVLWLA
CTHGDVIKAVIADAFGMHLDSFQRITADPGSVSVVRYTQLRPFVLHVNHTGARLA
>OMNI|NTL01NF2936/2-205
TVILLRHGVSTSNTARTLAGRSAGVDLTERGQEQARAVAERLGGLPIRHIVHSPLLRCRRTVGPLAEKL--------GLD
PQ-DDDRLIEVDYGDWTGKAIADLLTEPLWKVVQRHASGAVFPG--GEGLAQVQTRAVAAIREHDRVFAERHGHDVLWVA
CTHGDVIKSVLADALGLHLDGFQRIVVEPASLSVVRYTPHAPYVWRLNDTGSDLS
>OMNI|NTL05RS0879/2-205
TVVLLRHGRSTSNTAHTLAGRSPGVELDDRGREQAQAIVSRLADVAIEEIVHSPLVRCEQTVEPLARAR--------GLT
PV-VEHRLVEVDYGEWTGRELKVLLEEPLWKIVQQHASAAVFPG--GEGLAQVQARAVAAVREHDARLAELHGRDVVWVA
CSHGDVIKSVLADALGAHLDGFQRIVAEPASISVVRYTSTRPYVLKMNDTGADLS
>OMNI|NTL09SE3510/14-217
TLILLRHARSAANGSGTLAGRTAGVGLDETGRVQAEGLAGRLSGIPVSALVASPLQRCQDTVAGLAEKL--------GVP
VA-VEDRLAEVDYGQWTGRAVKDLTQEPLWKVVQQHPSAAVFPG--GEALAQVQARAVEAVREHDRRISGEFGPHAVWVA
CSHGDVIKAVLADALGLHLDGFQRIVVDPCSVSVVRYTETRPFVLRVNDTGGDVS