HMM Seed Alignment: TIGR03689
Download Alignment>OMNI|MT_2175/54-588
RDIHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDRLGQPPSGYGVLLA----------------------THDDD
TVDVFTSGRKMRLTCSPNIDAASLKKGQTVRLNEALTVVEAGTFEAVGEISTLREILADGHRALVVGHADEERVVWLADP
LIAEDLPDGLPEALNDDTRPRKLRPGDSLLVDTKAGYAFERIPKAEVEDLVLEEVPDVSYADIGGLSRQIEQIRDAVELP
FLHKELYREYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDA-----HEAKSYFLNIKGPELLNKFVGETE
RHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAIL
RPGRLDVKIKIERPDAEAAQDIYSKYLTEFLPVHADDLAEFDGDRSACIKAMIEKVVDRMYAEIDDNRFLEVTYANG---
-DKEVMYFKDFNSGAMIQNVVDRAKKNAIKSVL-ET--GQPGLRIQHLLDSIVDEFAENEDLPNTTNPDDWARISGKKGE
RIVYIRTLV
>OMNI|NTL01FA2793/4-519
ERLAEVQAELSSATGQNDRLVATLREARDQIVTLKEEVDRLAQPPSGYGIFVS----------------------RYDDG
TVDVFTQGRKLRVTVSPSVDVGSLSPGQEVMLNEALNVVEARSFERQGEIVLLKEVLESGDRALVIGHTDEERVVMLAQP
LLDG-----------------PIRAGDSLLIEPRSGYAFERVPKSEVEELVLEEVPDIGYEQIGGLKSQIESIRDSVELP
FLYKDLYREHQLKPPKGVLLYGPPGCGKTLIAKAVANSLAKKVEAITGQG-------NGRAFFLNIKGPELLNKFVGETE
RQIRLVFQRAREKASEGMPVIVFFDEMDSIFRTRGSGVSSDVENTIVPQLLSEIDGVEQLENVIVIGASNREDMIDPAIL
RPGRLDVKIKVERPDAEAARDIFAKYVVPSLPLYPEDLAEFDGNREATVAAMIQRVVERMYAESEENRFLEVTYANG---
-DKEVLYFKDFNSGAMIENIVARAKKMAVKAHI-EG--GLKGLRMQYLLAACLDEFKENEDLPNTTNPDDWARISGKKGE
RIVYIRTLV
>OMNI|NT02AS3963/44-572
DKLRHIDRQLAAATQNNSKLVGMLETAKAEILRLKNALDQEGQPPYSFGTILQLNPKRQPTA--------GNSGQAATEE
SVDIFNAGRKMRVGVSPLVNMNQLAVGQEVLLNEALLVVAGLGYERAGELVTLKEMLGTD-RALVVGRADEERVIRLSGA
LMSE-----------------KLRVGDALSIDSRTGYALEKVPRSEVENLVLEEVPDITYEDIGGLGPQIEQIRDAVELP
FLHPDLYREHGLKAPKGILLYGPPGCGKTLIAKAVANSLAARAAERTGNV-------DLKSYFLNIKGPELLDKYVGETE
RHIRLIFSRAREKASDGSPVVVFFDEMDSLFRTRGTGISSDVETTIVPQLLSEIDGVERLDNVIVIGASNREDMIDPAIL
RPGRLDVKVKIQRPDAEAAADIFYKYITTDLPFHESDLAEHSGDVQATVDAMIQRTVEAMYSTEKSNEYLEVTYANG---
-DTEMLYFKDFNSGAVVQNVVDRAKKYAIKDLL-TT--QQKGLRIDHLLRAVVDEFREHEDMPNTTNPDDWARISGKKGE
RITYIRTIV
>OMNI|ANA_1259/37-544
ERLRELSEHAGVLSRKNTHLANALRAARQELAVLHEDVKALQLPPLAHATVLAV---------------------DAGAR
TADVSIAGRRHRVGVGPAVVSSSLHPGDDVVLNEHLVITATCPSPRFGEVVTVKETYDDG-TVLVLARHDEEQVLSLSDT
LSDH-----------------RPRVGDALVADLAVRMALRPVVRSEVEELVLEEVPDVGYGDIGGLGEQIELIRDAVELP
FLHPDLYREHRLTPPRGVLLYGPPGCGKTLIAKAVAASLGAGG--------------RGEAYFLNIKGPQLLDKYVGETE
RRIRVIFARAREKAATGVPVVVFFDEMDSLFRTRGSGRSSDVETTVVPQMLAEIDGVDELDNVVVIGATNREDMIDPAIL
RPGRLDVKIRIGRPDRRGAAEILATYLAPDLPI-SEELLAAHGDAQGAVDALIEQVIDALYTRRRATEMVELTRADG---
-EIEILHVADLVSGAMLANIVDRAKKAAVKDLV-TK--GRRGLTSEHLRRAVIEEILENEGLPATVHPDDWARVSGRRGT
PVVSMSVLQ
>OMNI|NTL01CD1216/8-506
ESTAHLQRTISNLSARNAKLAELLKASRDKLSILQDQLEDLAAPPSTYGTFLEF---------------------SGGRE
TAEVFTAGRHMRLRISPDVEKAELVPGVQVRLGEASQVVEVCDISTTGQLATLVELLADN-RGLICDHTGEERVVKLAAA
LTEG--------------VDKLPKAGDTLLVDPRAGYAFEVIPKTEVSTLALEEVPDVTYADIGGLNSQIELIHDAVELP
FTQPDLYRAYDLKPPKGVLLYGPPGCGKTLIAKAVANSLAQRIGA------------GNRSYFINVKGPELLNKYVGETE
RRIRLIFERARELAEEGRPVIVFFDEMESIFRTRGSGVSSDMETTVVPQLLTELDGVESLSNVIIIGATNREELIDPAIL
RPGRLDVKIRVERPDKQAARDVFARHLKQNIPT------------AEPIDSLINNAVDHLYA---DNPYVELSLIDG---
-STEILHYRDFVSGAMIANIVDRAKKCAIKDHI-AG--RHSGVASEHLIAAINAENHESEDLPNTSNPDDWSRIIGRHGL
RVAHARVLG
>OMNI|NTL01CG1440/28-526
DEVRQLKRTNSDLGARNAKLAEMLKSSRDKLSVLFSQLEDMAQPPSVYGTFLET---------------------AKDGS
NAEIFAGGRRMRVAVSPMLCAADLMPGVQVRLGEGNQVLEACDFEQTGELATLMEMIGRD-RALVSDRSGEERVVKLAGP
LMDR--------------TAKLPRPGDTLLVDRKAGYAFEAIAKTEISRLALEEAPDVSYQDIGGLDDQIELIQDAVELP
FLHPEMYRAYNLHPPKGVLLYGPPGCGKTLIAKAVANSLANRIGE------------TGTSYFINVKGPELLNKYVGETE
RQIRVIFERARELAGDGRPVIIFFDEMESIFRTRGSGVSSDMETTVVPQLLAELDGVEDLSNVIVVGATNREELIDPAIL
RPGRLDIKIRINRPNKQGAHDIFTRYINDSIPL------------AEPAEDLIDRAVDHLYT---PRPYVRLTLIDG---
-SVETLNYHDFVSGAMIANIVDRAKKSAIKAHI-DG--TGVGLTAEQLIQAIDDENQQSEDLPNTSNPDEWSRITGRQGK
QVTHAEVVI
>OMNI|NTL02CJ0963/11-516
QTLRELQIANRQLGARNAKLVELLQASRTKLEEINGRLEALAEPPSTYGTLLQ----------------------ANRDF
TAEVFTAGRRMRLMVSPHVPQHELVPGAMVRLGEGQQVVEVTGQPDFGDIAQVVEVSGD--RLIIADKVGEEYVVKAAGD
LAKE------------------VVTGDSVIVDRKSGWAFEAVPRAETNNLILEEVPDVTYDDIGGLGQQITQIRDAVELP
FLHPEIYTRYGLRPPKGVLLYGPPGNGKTLIAKAVANSLAQ----------------SDSPYFLNIKGPELLNKFVGETE
RQIRAIFEQARRVASSGRPVIVFFDEMEALFRTRGTGVSSDMESTVVPQLLAELDGVEAAGNVIVIGASNREELIDPAIL
RPGRLDVKIRIARPDAFGAAAILSKHLDASLPI-DADFSAATGSNEAAAAALRQSIVDELFTRDEEHRYVTLHYADG---
-SREDLYWADFVSGAMLANIVDRAKTLAIKDALHNGANGTDGLRPEHVNAAVLAEVGDSEDLPDTTNPAEWARIYGHGTK
RVVDIDVHK
>OMNI|ANA_0673/25-569
HQLREARAQAVSLAAKNERLVTALGTARERIAELGQQLDAVTHPPVTLGLLTGPPRTRGAAGDTVDAVDAVDAADATQPR
EVAVSLSGRQMLLHVHPGVDDTELQVGRLVAVNDQMLVVATLPEPRTGEAVTLEERLDDA-RVLVTTGGGSARILTLSSA
LGRI------------AGTGEGLKPGDTLAADLRADVATALIERTSVEQLVVAETPDVSWADIGGLGPQIEQIRDALELP
FTHPELFHAYGLRAPKGLLLYGPPGCGKTLIAKAVATSLADSPSA---SGI-----TGRPPAFLNIKGPELLSKFVGETE
RQIRAIFDQARKAAAEDRPVVIFFDEMEALFRTRGTGVSSDVETMIVPQVLAEIDGVESLRNVVIIGASNREDMIDPAIL
RPGRLDVKIRINRPDAAAAEEILARHLIADLPLAPGELAAHGGDREATAASLRRVVIDALYARNEATAVLEITEAHAAGG
TSTRVLHLADLTSGAMLAAIVSRAKTASIKDEL-AG--GQGGLSAARLRSAVATEARQNEEITGATTPEGWARLIGTRTS
QILSVRRLG
>OMNI|NTL01BL1710/2-521
SDTEDLAALNDRLMAKNHALAEALSRAGKELTKAKSQLAQLAQPPLTFATMVKVDSTRTDED-------------GIQHA
SAEVISGTRRMVVPVASNVNAARLTAGATVMLNEKLVLVEQRDADTVGQIRSVKQVLDDG-RLIVTDASGNPVLIRRSGA
LAYA-----------------GINQGDRIIVDPSVRLAIEALPAEGDKDLVLEETPDVTFADIGGLDSEIGRIRDAVQLP
FQHRALFERYDLKPPKGVLLYGPPGNGKTMIAKAVANALCEGGYDTNGDGSISPAETHVKGVFLSVKGPELLNKYVGESE
RLIRLIFQRARERAADGNPVVVFIDEMDSLLRTRGSGVSSDVETTIVPQFLSELDGVESLDNVMVIGASNRVDMIDPAVL
RPGRLDVKIRVGRPKTNQAIAIVDHYLTDDLPL----------EDGVDAHALSAVLVHDIYGTSERRHLCDVQEENG---
-QWHALFLADVVSGAMLKNIVDRAKTRAVKESIETG--LDVALTVPLLAAAVEDEYRETRDSMADVDPEQWSRINGM--D
PIRRIRTAE