HMM Seed Alignment: TIGR03573
Download Alignment>NTL01NW2392_N.winog/1-347
MLSCSKCLLPETAE---------------ATSF----DDTGSCSVCRQIEVRDTQIDW---DDRHRQMMELVAQYRDKGL
---YDCIVPYSGGKDSVFQLWYVVRKLGLKPLVVRFDHWFY-RPLVEENNTSVFKQLGVDVLNFTPNWHVVRELMLESLK
-RRGDFCWHCHTGIYAHTMQIAIRYETPLLFWGESLAEYQSFYSY-----DEMEEVDEKRFNR--AMNL-GITADDMYEF
LG-GRVAKRDLYPFVYPPRKELM------RIKCRSICLGSYIR-WDTKKHVEIIKRELGWKGQEVEGIPP---EYD-YEK
IECFFQG-VRDYLKYIKRGMGRTNHLANIDIRNHRITREEGERLVKE--YDGKRP-PSLDLFLDYLQISEEQFLDVAM
>NTL02VV0320_V.vulni/1-348
MKYCKRCLYPENHA--------------LNLIF----DVDGVCSGCRVHE-EKYQIDW---NEKQNELQKLLEHYKGRPG
SH-YDCVIPVSGVGDDFFVVDLIKNKYGLNPLLVTYNTHFS-TKVGVRNLARLITELDCDHMMSTVGPDTVKEITRLTLD
-KLGDMYWHVLAGSQTFPVQVATKLDIPLIIWGVNGW-----LDQVGMFSHHDRVEMTKKVRK--EHALRGIDAEHLIGT
S--EKVSAKDLQAFTYPSDEQLE------SSRVRGLYIGNYVF-WDSQKQIENVIKRFGYETNQQER------TYNKYES
IACANNASVHDYVKFLKFGYAKVNDHVARDIRLKRITREQGLSLIKE--YLPRKP-ESLNTFLEWIELTEKEFHQAID
>NTL02VV0321_V.vulni/1-346
MKFCSNCVMPDTKP---------------GIVL----DERGFCNACRTKE-VKEKIDW---TARYNDLSLIVEDIKAQNN
PF-YDCIVAVSGGKDSWYQAAVLAEEFGLKVLCVTLAAHLP-TTEGIDNLNEMIKDLNVDHMKITIKPSVFRKIRRKCFL
-RQGEPNWAEHCAMFSSVVNTALIYDVPLVVWGEDIA-----FEFGG-LQRSESKPSAIAINK-----SDLIKEKTIHDW
LD-NDISERDIFFYKYPDYQKLQ------DAGVKSIYLGHFVR-WYGRQNYEFVKKR-GFTG-RREGPLP--GNFLDYDN
IDEKLCE-INIWFKYLKFGFWRATDQTCYDIWNDRMTRDEAVDIVNR--LQAEFPSNDFEHFLRFHDITEEQFWETVE
>CJE_1511_C.jejun/1-345
MKFCKKCVMPDTKP---------------DLHF----DEEGVCDACRSQEVKNQNINW---QEREKEFFELIKKYKKHPV
---YDCVIGVSGGKDSTFQV-VKMLELGLNPLCVCFEPSVP-TKIGRKNLDNLNH-LGVDLIHIKRDPKVYQKLAREAFI
-RTGDNEWQNHLGIFTSVPRIAVNFGVPLIIWGESPQ-----IEYGGPASSKNKNILGREWLE-EFGGLLGNRASDMLGV
---NGITEKDLFLYTYPSDEELQ------RVGVTGLFLGYYFK-WDYKKILE-ISKKYGFL----TLDHPVETTYENFEN
LDCYSNH-VHDYLKYCKYGFGRATDNACLDIRLGYISREEGVRLAQK--YDGKPPKKAIKKYLEFSGFSEEEFQKIVD
>NTL01FN0174_F.nucle/1-349
MKYCKNCLQPDTRP---------------GIKF----NEDGVCYACLYEK-EKEKIDW---KSREKELKEIAEWAKKTSK
GP-YDCVIGVSGGKDSTFQAIYAKEKLGLHVLLVNGEPDQI-TEIGRKNIENLIQ-KGFDIIKLRPNPKITKQLVKTAFL
-KYGNPMKSTEYPLWTSAYIIADKFDIPLIIQGENAA-----LTLG--VVNTKLGVDGNAMNV--DGGN-TLNGCNASDW
VE-DGLPLEDLYMYQFPDKEKMA------KKGIKAIWLQYYAKEWSQVYNADFSIAR-GLLGRTVEDLHD-LGRYRRYSS
LDSNLHI-VNQMLKYYKFGFGFATDEACYDIREGRLTRDDAIWLINE--YDGKCGKQYIDEFCKYIEITEEEFWNTVD
>NTL01CJ01266_C.jejun/1-350
MIYCDHCVMPNTRP---------------GINFTKDKEGKNICSACINHK-NKENIDY---KARFKELEVLCDKYRRMNG
KFEYDCAIAVSGGKDSHFQVHIMKEKLGMNPILFSVEDNFTMTEAGKKNLKNLSETFGCHIISLKPDIKTQKKVMLKTFE
-KYGKPTWFIDRLIYSYPFAMALKFNTPLLVYGENVS-----YEYGGSDTEETPSAKEIFLNG-------VASDLNINEF
ID-DEIKEENLQLFFNPNKDKLD--------KLNPIYLSYFVK-WNSYSNYIFAKSR-GFT--DLEGEWDRTMCAENFDQ
VDSIGYI-LHAWMKYPKFGHACASDYAARFVRYGLLSRKEAIELVQK--RDHKLDNKCVEDFCNFIGISKTTFWKIVE
>NTL03SC0434_S.sp./4-345
PKFCTRCLAMSTRP---------------RITF----NRDGVCNACLWQE-QKSSVDW---DDRNSKLLSLLDSHRSKNN
S--YDVIVPVSGGKDGSYVAYNLKHKFNMNPLCVTVTPPLE-TQLGAQNLKNFIK-SGYDQVSININPETIRNINRAGFV
-HHGFPYFGWLVAIVTSVTRVAQQMNVPLIMYGEDAE-----MEYGGSSEKANLTTFGIEYMK-----RVGFEAGYEKVF
ST-LDLSDSDLYWLTFAEQDKTQ---------VLFSHWSYFEN-WDPYRNYLVAKKQCGLQ----EADDTNFGTFTNFAQ
NDQYLYV-LHTYLMYLKFGFGRSNQDACIEIRRGAMKREQAINLVRL--YDGQFPDEFLQMYLEYYQMSEAEFNATLA
>NTL04LP0729_L.pneum/41-406
VEFCKSCVISNQRPNSAVEYEHKKESKKHTIHF----DDEGICDACRVAERKKSTINW---EERDRQLRELCDRFRSKDG
S--YDCVVPGSGGKDSFYAAHILKYKYGMNPLTVTWAPHMY-TPWGWRNFQSWIH-AGFDNHLFTPNGRVHRLLTRLAVE
-NLFHPFQPFMIGQKAYAPKMALLHKIKLVVYGENEA------EYGNPIGDTESAKRDWKYFTADDKSKIFLGGTSVQEL
KSDFGLNDNDLDAYLPADPQQIE------EQQVEVHYLGYYLK-WHPQSCYYYSVEHGGFE----ASPERTPGTYSKYNS
IDDKIDD-FHYYTTLTKFGIGRATYDASQEIRSGDITVEEGVALVKR--FDQEFPERFAEEIFKYLSINLKEFPIASQ
>NTL04MM1081_M.marip/3-339
QKICKRCIMDMTDP---------------NIVF----DENGYCNHCYNALEQNSKIKVNM-AEKNKELKKIVNLIKKNGK
NKRYDCIIGVSGGVDSTYVA-YLVKKLGLKPLAVHLDNGWN-SELAIMNIENTLKKLDIDLYTRVLNWEEFKDLQLSFLK
ASVPDLEIPTDHAIIATLYEVAHKFGIKYIISGHNII-------------TESIGVPMWSNGH--------YDWKYISGL
Q--KKFGNIKLLDY--PKMTPLNIFYYQFIKDIKMIRILNYAD-YDKKRVVELIEKEFSWK------------DYP-TKH
GESIYTHFIQSYILPEKFGYDKRKCHLSNLICSEQITRAEALGQFKKPLFTPQELEELINYSCDKLEISRKEFESLMK
>NTL03PA03150_P.aerug/2-339
MKICSRCVMDTSDA---------------EIVF----DEAGVCNHCHKFDNVQSRQLF-SDASGEQRLQKIIGQIKKDGS
GKDYDCIIGLSGGVDSSYLA-VKVKDLGLRPLVVHVDAGWN-SELAVSNIEKIVKYCGFDLHTHVINWEEIRDLQLAYMK
AAVANQDVPQDHAFFASMYHFAVKNNIKYILSGGNLA-------------TEAVFPDTWHGSA--------MDAINLKAI
H--KKYGERPLRDYKTISFLEYY-FWYPFVKGMRTVRPLNFMA-YDKAKAETFLQETIGYR------------SYA-RKH
GESIFTKLFQNYYLPTKFGYDKRKLHYSSMILSGQMTRDEAQAKLAEPLYDADELQFDIEYFCKKMRITQAQFEELMN
>NTL02VV0354_V.vulni/10-349
NQICTNCVMDTTDS---------------KITF----DSKGVCDHCNDFY-ENVQPNWHTDEKGHLELERIITKIKKDGE
GRDFDCIMGMSGGADSSYLLHVAVKKYGLRPLVFHVDGGWN-SQIAVNNINVMIEKLGLDLYTEVINWEEMKAFQKAYFK
AGVSNIDIPQDHAFIATLYNFAAKHKIKYILNGGNIS------------TECVRNPLEWIYY--------GTDMAQIKDI
R--KRFCDNSLKTYPFSNVLKHK-LYLRYIQRIQVVKPLNYFP-YIKEEAMKELEREYGWV------------PYP-QKH
FESRFTRFYEGYWLPRKFGYDTRKVQYSSLILTGQMTREEAIEKLKFPAITDEDGKHDLEYIANKLDIPVSELQSYFE
>NT01MC3912_M.sp./56-393
IRTCSRCIMNTTDA--------------VSITL----DDEGVCSECRNFDQKYQKILS---QRHENSLELHVGQIKALGE
GRPYDTILGVSGGVDSTYLA-LLCKRYGIRPLLVHCDNGWN-SELAVDNINRMLEITGFDLHTHVIDWDTFRHMQRAYLW
ASVVDIEVLSDHAIFSVMYDTAKKYNVPTVISGVNVE-------------TEGFLPYSWIYLK--------DDVANIKDI
C--AQYCKVPIDRYPMIKEKDLDALRKSNSKRLKRFDLLNDLP-CRVEEIKNEISKTFGWR------------DYG-GKH
FESIFTRFFQGYILPVKFGIHKRKAHLSNLICSGQISRQEAICRLEQLDYSPELCWEDYEFVIKKLGLSREEFSRIML