HMM Seed Alignment: TIGR03542
Download Alignment>NTL01CP00477_C.pneum/1-389
MRRNPHFSLLKPQYLFSEISKKLAQFRKENPEISVIDLSIGDTTQPLCRSITQAIKEFCVSQEKQETYRGYGPETGLEKL
RTKIASEVYENR---ISPEEIFISDGAKPDIFRLFSFFGSEKTLGLQDPVYPAYRDIAHITGI-----------RDIIPL
ACRKETGFIPELPNQQSLDILCLCYPNNPTGTVLTFQQLQALVNYANQHGTVLIFDAAYSAFVSDPSLPKSIFEIPEAKY
CAIEINSFSKSLGFTGMRLAWNVIPKELTYDNN----EPMINDWKRLFATTFNGASLLMQ---EAGYYGLDLFPTPPAIS
LYLTNAQKLKKSLETAGFSVHGGDHAPYLWVE-LPEGISDEEAFDFFLHQYHIAVTPGHGFGSCGQGFVRFSALTQPQNI
ALACDRLCTAS
>NTL01CF0757_C.felis/1-389
MRRNSNFSSLETNYLFSSIRQKIRSFREKHPEISIIDLSIGDTTQPLHASVIDTFSTSVRKLGNPKTYRGYGPELGLPAL
KEKLSEVCYRGK---VSPEEIFISDGAKTDIFRLFSLFGPGKTIAVQDPSYPAYIDAAILAGA-----------RKIVKL
PCTKETDFFPVIPQEENIDIFCLCSPNNPTGTVLNREQLKELIDYANSHGSIILFDAAYSAFISDPSLPTSIFEIPEARF
CAIEINSFSKSLGFAGVRLGWNIVPKDLKYSDG----SLIIRDWERFLCTTFNGASLPVQ---EAAIAGASLFPNLEAIS
KYRYNSSLLREALQKAEFVVHGGEHAPYLWVE-VPSMIPDEDFFDFFLYQYHIAITPGKGFGSCGTGYVRFSSLGKSENI
VAACQRLSQTS
>NTL03CT0410_C.trach/1-390
MKRNPHFVSLTKNYLFADLQKRVAQFRLENPQHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPAL
RQKLSEDFYRGF---VDAKEIFISDGAKVDLFRLLSFFGPNQTVAIQDPSYPAYLDIARLTGA-----------KEIIAL
PCLQENAFFPEFPEDTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARF
CAIEINSFSKPLGFAGIRLGWTVIPQELTYADG----HFVIQDWERFLSTTFNGASIPAQ---EAGVAGLSILPQLEAIH
YYRENSDLLRKALLATGFEVFGGEHAPYLWVKPTQANISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSLGKREDI
LAACERLQMAP
>NTL03PS0685_C.Proto/11-412
VKRNVHLTKLQSGYLFPEINRRKNEFLKKHPSAQLINLGIGDTTQPIPLYISEAMQNFAKQLASEKTYRGYGTEQGSILL
REAIAEQYYQGK---IDPQEVFVSDGSKCDVGRLQILFGSDATIAVQNPTYPAYVDTGVINGQASFFQTSTKQYQRITYM
SCLPENNFFPDLANLPKTDLIYFCSPNNPTGSAATNEQLRELVQFAKKRQSIIIFDAAYASFVRSSHIPRSIYEIEGAKE
VAIEVGSFSKMIGFTGVRLGWSVVPKQLRFEDG----HSVQQDWERIVCTFFNGASNIAQAGGLAALQKEGLQAIDELSS
YYMKNSNILKKAFEECGYKVYGGENVPYLWVH-FPQ-LTSWEAFEILLKQSQLVSVPGSGFGSAGEGFLRFSAFGKQSDI
TVALPRIKHAL
>NTL01MT00050/2-409
VTVNENYLLLKSSYIFSEINRRVEEFQRKNPDADIIRMGIGDVTRPLPEAVVEAFHRAVDEMAEEETFRGYGPEQGYPFL
REAIAENDYASRGVDITADEIFISDGAKCDTGNIQEIFGLDNVVAVTDPVYPVYVESNVMAGRAGPAD-DDGRYSGLVYL
PCTEENSFIPSLPEER-VDLIYLCYPNNPTGTTLTEKQLAEWVDYARDSGSLILFDAAYEAYIQEDGIPHSIYEVEGARE
VAIEFRSFSKNAGFTGTRCAFTVVPEELEVPDSSGRMHSVRELWNRRQTTKFNGVSYPVQRAAEAVYTPEGQREIRESID
YYMENARIIRESLERAGLRYYGGVNAPYIWIR-TPEGMDSWQFFDTLLNDAEVVGTPGSGFGPSGEGYFRLTAFNSFRNT
VKAMERISELS
>GSU_0162/2-409
AKINDHYLKLKAGYLFPEIGRRVREFAAANPSAKVIRLGIGDVTRPLAPAVIKAFHEAVDDLATTENFAGYGPEQGYDWL
INAIIEKSYKPLGVDLKTEEMFISDGSKCDCANILDIFALDNVVAIGDPVYPVYNDTNVMIGRTGEAD-DKGYYKGIVYM
PCTEENGFIPSLPTEK-VDIIYLCFPNNPTGTVATKAELKKWVDYAIANDAVIFFDAAYEAFITDPAIPHSIYEIEGAKK
CAIEFRSFSKTAGFTGVRCGLVVVPEEVMGTTPTGEKYSFNKLWLRRTTTKFNGASYPVQKAAAAVYSDEGWQQNKEIID
YYMENARIIREGLAAAGLTVYGGVNAPYIWLK-TPGGMSSWDFFDKLLNECNVVGTPGSGFGPSGEGFFRLSAFGHRENV
IEAVERIKKNL
>NTL01BF2583/2-410
ALVNEHFLKLPGSYLFSDIAKKVNTFKITHPKRDIIRLGIGDVTRPLPKACIEAMHKAVEEMTSAETFRGYGPEQGYDFL
IEAIIKNDYAPRGIHLSPTEVFVNDGAKSDTGNIGDILRHDNSVGVTDPIYPVYIDSNVMCGRAGVLDTESGKWSNVTYM
PCTAENHFIPAIPEKR-IDIVYLCYPNNPTGTTLTKAELKKWVDYALANDTLILFDAAYEAYIREPDIPHSIYEIKGAKK
CAIEFRSFSKTAGFTGVRCGYTVVPKELTAATLEGERIPLNRLWNRRQCTKFNGTSYITQRAAEAIYTPEGKEQIQETIN
YYMTNARIMKEGLESTGLKVYGGVNAPYLWVK-TPKGTSSWRFFDQMLYEANVVGTPGVGFGPSGEGYIRLTAFGERDDC
IEAMRRIKNRL
>FSU2316/4-402
SIVNTNYDLLPGSYLFSTIAQKIKEYQGAHADADIIRLGIGDVTTPLIPEVIKAMHNAVDEMAVKGTFRGYGPEQGYDFV
REAIVRGEYTARGIEMDPNDIFVSDGSKCDVANIQELFTENVNIAIPDPVYPVYLDSNVMAGRAGVLQ-DDGRFSKVTYL
ASTAENNFQPDLPKNP-VQLIYLCSPNNPTGTVLSRETLQKFVNYANENGALILFDGAYNCYIQDESLPHSIFEIPGART
CAIEFRSFSKTAGFTGVRCAYTVIPHELS---------KLHAMWNRRQCTKFNGVSYVTQRAAEAIYSPVGWQQTKEVIA
GYMRTAGVIRKELTAAGYTVFGGEHAPYIWWK-IPDGEKSFDFFDRLLATCEVVGTPGSGFGPCGEGYFRLTAFGDYERT
CEALKRIREKL