HMM Seed Alignment: TIGR03498
Download Alignment>NTL04RP1086_R.palus/25-438
GVVSEVTPTYYRVAGLSRYVRLGELIGLDVDN-----QIQLGEVVRIDGTGVTAKPFDSHVAAGLGLVAY---RLPPKTL
SPHPSWKGRVVNALGEPLDDAGVL----QAGERVMSTDANPPPAMSRTRVQAPLHTGVRVVDLFTPLCIGQRIGIFAGSG
VGKTTLLSMLAQSSGFDTVVTALVGERGREVREFLEEALVHH-RSRAITVVSTSDESPMMRRLAAKTATTIAEYFRDRGE
SVLLIVDSVTRFAHAAREVALATGEPAIARGYAPSVFSELPRLLERSGPG-LDGQGS----ITGIFAVLVDGDDHNEPVA
DTVRSTLDGHIVLDREVADQGRYPAINVLASVSRLAQHVWSPEERNLVRKLRAMIARFEDTRDLRLMGGYQPGRDNELDQ
AVQLVPKIYEVMQQAPSDPAC-GEPFQELLAVI
>NTL01ME6427_M.extor/27-440
GPVREVTASAARVAGVSAFVRLGDRMGFSADG-----RTQVGEVVRIDAAGATVKPFESRIEAGIGSLAH---RIGPAQL
RPDPRWKGRVIDALGRPIDGLGPL----AEGPASVPLDADPPAAMTRARVKTPLPTGVRAIDLFTPLCAGQRIGIFAGSG
VGKSTLLAMLAGAQGFDSVVVALVGERGREVREFLEGPIAAA-RDRAVIVVSTGDESPMMRRQAPKVALAVAESFRDRGE
SVLLIVDSVTRYAHAARDVALAAGEPAVARGYPPSVFSDLPRLLERAGPG-AEGTGT----ITGIFSVLVDGDDHNDPVA
DSIRGTLDGHVVLDRAIAEQGRYPAIELLGSISRLAGEVWTGDQRELVRKLKSMMARFEETRDLRLMGGYRAGSDPDLDQ
AVSLVPRIYEALRQEPGQPPS-RDAFLELAQSL
>GBOORFA0131_B.ovis/29-444
GTVSDVSRSSIAVRGLSRDARLGDMVAIRAGEG----APSLAEIIRVADLQVLVKPFDDRIMPSLGAAVF---EEGPLRI
RPAPEWRGRVINALGNAIDGKGAL----KPGTRPMAAESLAPAALRRARVDRGLRTGVNVIDIFTPLCFGQRIGIFAGSG
VGKSTLLAMMTRAADFDTVVLALTGERGREVREMLEETMAGH-LGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQ
NVLLIVDSVTRFAHAAREVAIAAEEPPVARGYTPSVFSQLPRLLERAGPGSAEAGGS----ITGIYSVLVDGDDHNDPVS
DTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSMVARFEETRDLRAIGAYQKGHDGLLDQ
AVDFVPRIYEALQQSPETGLS-DDPYNDLAAAL
>NTL05MS0300_M.sp./41-456
GRISEVTPMYYRVRGLSKTARLGQIISYRSHG-----SEYRGEVVRISEDDVIVAPFEHSAEASLGQAVF---ATGTLEI
RPHASWRGRVIDALARALDDGPALIRSAPQGPAAMP---RTPAALRRQRVAEPFLTGVRVVDLFAPLCLGQRIGIFAGSG
VGKSTLLAMLARAEAFDTVVVAMVGERGREVREFLEDTLGEAGMKKTVAVVATSDESAMMRRRAADTAMRVAEHFRDAGE
KVLLLLDSITRYAHATREVATGAGEPPVARGYPASVFTDLPRLLERAGPG-ETGHGS----ITAVFSVLVDGDDHNDPVA
DCVRGILDGHLVLDRAIAEQGRFPAVSPLASISRLADRSWTDDRKRVVQRLKAMIARFEETRDIRLLGGFQAGLDPELDL
AVRQVPLIYDILRQSPKDPPA-MDPFADLAAHL
>NTL01AT0544_A.tumef/43-456
GHVRTIAAGHYTVSGLSRHVRLGEFVAHRSATG-----IHLGEVVRVEPDICYVCPIEPGEPIGIHDTVI---RKGAFRV
SPDESWCGRTINALGEPIDGQGPL----ASGIVRRSISNNAPPSMTRKRVETPFKTGVRAIDIFSPLCLGQRLGIFAGSG
VGKSTLLSMLAKADAFDKVVIALVGERGREVREFIEDTMGDN-MSKSVAVVATSDESPMLRKMAPLSAVTIAEHFRDQGD
NVLLIIDSVTRFAHAIREVAVASGEPPVARGYPASVFTELPRLLERAGPG-AEGTGT----ITAIVSILVDGDNHNDPIA
DSTRGILDGHIVLDRSLAEEGRYPPINPLASISRLAKKAWTPDQEKLVSRLKALVHRFEETRDLRLIGGYRPGTDPDLDM
AVKQVPIIYETLKQLPDEPAA-QDAYADLATAL
>NTL02ML2244_M.loti/44-456
GLVTEVTQTHYKVRGLSDFARLGDMVEQRGQAG-----SRRGEIVKISRDEVVVAPFERSADAGIGDAVF---RRGPLAV
GPHNSWRGRTIDALTRAIDGGPPL----IRGED-LSGGATTPGAMARQRVGTAFMTGVKVIDIFTPLCFGQRMGVFAGSG
VGKSTLLAMLAGADAFDTVVVALIGERGREVREFLEDTIGDS-MAKTVAVVATSDESAMMRRRAPDTAMRVAEHFRDQGH
RVLLVLDSITRFAHALREVATGTGEPPVARGYPASVFTELPKLLERAGPG-AEGKGS----ITAIISVLVDGDDHNDPVA
DSVRGILDGHVVLDRAIAEQGRYPPVNPLSSISRLAGKAWSVEQRALVTRLKSMISRFEDTRDIRLLGAYQGGADAELDI
AVRQVPLIYEALTQSPRDRPS-ADPFSDLARHL
>NTL01GO1635_G.oxyda/21-440
GSVKDVIGLCLTVIGLEGFITIGDRVAVKALDG----RVVQSEVVGFQGDVARLMSFGPLDGIGPGCEARIPLNRHDGGL
GVNESWLGRVLDPLGQPIDGKGPL----FPSFERQPVQCPPPNAASRARLGERIDLGVRALDTFTTCRRGQRLGLFAGSG
VGKSTLLSMLARGADCDVAVISLVGERGREVREFIEDDLGPEGLARSVLVIATSDSPPLMRREAALSAMAIAEYFRNQGK
SVLLLMDSVTRFCMALREIGLSAGEPPATRGYPPSVFAELPRLLERAGPG-YADQGM----ITALFTVLVEGDDQNEPVA
DAVRGILDGHIILDRKIGEQGRYPAIDVLRSLSRAVPGCNSPEENALTQRARAAMATYQRMADMIRLGAYKPGTDREVDE
AIALMPKLNEFLSQGRNERTTRAEAFEQLAQIM
>NTL02RR0526_R.rubru/22-439
GRVVGVQGMLVEIGGAQTNLSVGDRCAVIARDG----RPITCEVIGFRAARALLMPFSVLDGVGLGCRAE--VIEGVPAI
YPTRDWLGRVINAMGEAVDGKGAL----PAGERAVAIRGRPPSAHSRQRVGGKLDLGVRAINTFLTCCRGQRMGIFAGSG
VGKSSVMSMFIRNTNADVIVMGLVGERGREAREFIEDDLGEEGLKRAVTVVATSDESPLMRRQAAYMTLAVAEYFRDQGL
DVLCLMDSVTRFAMAQREISLSAGEPPASKGYTPTVFAELPKLLERAGPG-VEGSGS----ITGLFTVLVEGDDHNEPIS
DAVRGILDGHIVLDRAIAERGRYPAINILRSVSRTMPGCNSPAENALVAKGRRLMAAYENMAELIRLGAYRKGSDPETDT
AIHYHPALDAFLTQAKTEGTDLATGYAMLEAAL
>NTL01NH3369_N.hambu/30-447
GRVVGVRGLMVEIAGPIHAMSVGARILIETGGD----RVIPAEVVGFNGDNAVVMPFAGLDGVRRGCRAV--IANASSQV
RPAPSWLGRVLNAMGEPIDGKGAL----PQGPVPVPFRNSPPPAHSRKRVGKPLDLGVRALNTFLTCCRGQRLGIFAGSG
VGKSVLLSMLARNADADISVIGLVGERGREVQEFLQDDLGEEGLARSVVVVATSDEPALMRRQAAYLTLAVAEYFRDEGK
DVMCMMDSVTRFAMAQREIGLSTGEPPTTKGYTPTVFTELPRLLERAGPG-AADKGT----ITGIFTVLVDGDDHNEPVA
DAVRGILDGHIVMQRAIAERGRYPAINVLKSVSRTMPKSADPAFLPVITRGRQVMATFSDMEELIRLGAYRTGSNAEVDE
AIRLNPLLEDFLRQAKDEVTSIEDGYRRLQQIL
>NTL01ME4306_M.extor/27-448
GRVTAIRGLLVEVAGPVSAMRLGGRIDVVVEGAGVAASTVPCEVIGFAGDRALAMPFGSLEGVRRGCPALV-RDEAAGAI
RPSAAWLGRTVDALGRPIDGLGPL----AQGPAIYPLRADPPPAHGRRRVGPPLDLGVRCINTFLTMCRGQRMGIFAGSG
VGKSVLLSMLARYTAADVAVIGLVGERGREVQEFLQDDLGAAGLAHSVVVVATSDEPVLMRRNAAYVTLAVAEYFRDQGA
QVLCMIDSITRFAMAQRDIGLAGGEPPTAKGYTPTVFSELPRLLERAGPG-V-GEGA----ISGLFTVLVEGDDHNEPVA
DAVRGILDGHIVMERRIAEQGRYPAINVLRSVSRTMPRACDPAHLPTVRRARKVLATYADMEELIRLGAYRAGSSPEVDE
AVALMPDLTAFLGQGKEEATSISEGYDRLAAIV
>NTL06MM0628_M.magne/22-438
GQIAAVQGMLLEAGGVQRTISVGDRCNVVARDG----RRVICEVVGFRQGRALLMPYSPIEGIGLGCRTE--VQDAEPVV
FPDRGWLGRVINGFGEPVDGLGPL----PGGDTAYPVKAQPPSAHSRSRVSGKIDLGLRSVNAFLTCCRGQRMGIFAGSG
VGKSSLMSMMARNTSADISVLGLIGERGREAREFIEDDLGPEGMKRSVVVVSTSDESPLMRRQAAYMTLTVAEFFRDQGL
DVLCMMDSVTRFAMAQREISLSAGEPPASKGYTPTVFAELPRLLERAGPG-V-GKGS----ITGLFTVLVDADDHNEPIA
DAVRGILDGHIVLDRSIAERGRYPAINILRSVSRTMPGCNNQQENDLVRRARSLLSTYEDMAELIRLGAYRRGTDPKVDE
AIHYYPAIEAFLGQLKTEATTLQTCYAQLAEVL
>CC_3040_C.cresc/18-440
GRVAAVNGLLIEVRGGLTRLAVGARVEIERFGQ----KPLPAEVVGFRETRALLMPFGPVEGVGPGAEIR--IVPEGAVV
RPTKAWLGRIINAFGEPIDGLGPL----PQGEVPYPLKTPPPPAHARGRVGERLDLGVRSMNVFTTTCRGQRLGIFAGSG
VGKSVLLSMLAKEATCDAVVVGLIGERGREVREFVEETLGEEGLRRAVVVVATSDEPALTRRQAAYMTLAISEFMRDQDQ
EVLCLMDSVTRFAMAQREIGLAAGEPPTTKGYTPTVFTELPKLLERAGPGPIRPDGTTAAPITALFTVLVDGDDHNEPIA
DATRGILDGHIVMERAIAERGRFPAINVLKSISRTMPGCQHPHERDIVKGARQVMSAYSNMEELIRIGAYRAGADPVVDR
AIRLNPAIEAFLSQDKEEATSLDDSFGMLGQIL
>TDE_1218/22-435
GRVVRVHDKLIESEGPVAS--VGELCQIITDDNP---DGLKAEVVGLNGTIVQLMSYTDVQGVKIGDLVI--ASGEILSV
PVGNILLGRVVDALCKSADG-KPE----PYSAKRYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTG
IGKSTLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALARIRGAYTATAIAEYFRDQGK
DVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPKLLERSG---TSEKGS----ITGFYTVLVEGDDMNEPIS
DAVRGILDGHIVLDRNLAERGQYPAVNVLKSISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDD
AIDHYPRIYDFLTQEVDDPAKLKDTLQKLSDIT
>TP_0402/23-436
GHVTAVRGLLIESRGPHAV--VGELCRIVLRRQG---RPLIAEVVGLAGSTVKLMSYTDTHGVEVGCAVV--AEGAALSV
PVGDALLGRVLNAFGKAIDGKGEI----YAPLRSEVLR-ASSNPMERLPITRQMVTGVRVLDSLLAVGCGQRLGIFSGSG
VGKSTLMGMIARNTDADVSVIALIGERGREVMDFVAHDLGPEGLKRSVIVSATSDESPLARVRGAYTATAIAEYFRDQGK
QVLLLFDSLTRFAKAQREIGLASGELPATRGYTPGVFETLPKLLERAG---SFSMGS----VTAFYTVLVDGDDLDEPIS
DAVRGIVDGHIVLSRALAQRNHYPAIDVLQSVSRLAHRVLGADMKEAVRIVRRALAVYAEVEDLVRVGAYQQGSDAELDR
AIAMRAELERFLTQGAQERVRFQDTVTSLSMLT
>BB_0288/22-435
GRVQKIKGLLVESLGPQCA--IGDLCLIDQRNG----KKVCAEVLGFNGPYVSLMAYEGFSGIEVGNKVY--SLNKGLEI
NLSDELLGRVIDSLGRPIDNKGSF----LNNSYKELIF-EKINPINRSIFEDQILTGVKVLDGFLPVAKGQRVGIFSGSG
VGKSTLLGMIAKNSNADVNVIAFIGERGRELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYVATMIAEYFREQGK
DVALLFDSITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPILLERSGF--NGNGGS----VTGFYTVLVEGDDFTEPVA
DNIKAVLDGHIILDRDLFDRGIYPSINVLSSTSRSIHRIMSLEKQKLIMKARNLLSIYKDYEDLIRTGIYLKGSNKDVDF
AISKYPKIINFISQGINETFDFENLEDEIKEIL