HMM Seed Alignment: TIGR03431

Download Alignment

>NTL01SF3876_S.flexn/1-292
MNA-KIIAS---LAFTSMFSLSTLLTPAHAEEQE-------KALNFGIISTESQQNLKPQWTPFLQDMEKKLGV-KVNAF
FAPDYAGIIQGMRFNKVDIAW-YGNLSAMEAV-DRANG--QVFAQTV-AADGSPGYW-SVLIVNKDSPINN---------
--LNDLLAKRKDLTFGNGDPNSTSGFLVPGYYVFAKNNISASD-----FKRTVNAG-HETNALAVANKQVDVA-----TN
NTE-------NLDKLK-TSA-------PEKLKELKVIWKSPLILGDPIVWRKNLSETTKDKIYDFFMNYGKTPEEKAVLE
RLGW---APFRASSDLQLVPIRQLALFKEI
>NTL01BXA2188_B.xenov/3-290
FLR-SLITL---AVGAAAFAC-------VATAQA-------EDINLGIISTDSSSVLKQRWEPLIQDMNRQTGL-NVKAF
FATDYAGIIEGMRFNKVQVGY-FGNASAIEAV-DRSQG--EVFAKVQ-YANGDAGYY-SVLITNVNSRFKT---------
--LDDVFRNTKDVTLGFGDPNSTSGTLIPGYYLFAKHNTPVNT----SFKAVLPSS-HEANLLAVVNNKIDIA-----TN
NTE-------MLDTLK-KEH-------PDKFAQVRVLWKSPLIPSDPLVWRKDLPQATKDKLRNFFLNYAKTDPHEKAVM
AAITG-YGGFAASSDTQLLPIRQVALFQQK
>NTL01RM0774_R.metal/1-291
MLR-RTFLA---VVASGVVAL-------PAFAQDV------KTLNMGIISTETSSNLKSAWQPVIDDLSRALGV-QVKPF
FASDYAGIIEGMRFNKVQIAW-YGNKSAMEAV-DRANG--EVFASVI-DKDGNPGYW-SLLIARKDSDLKS---------
--VEDVIKRGKDLTYGAGDPNSTSGTAVPGYYLWAANKVDPKT----LFKAVRISN-HETNLLSVLNKQVDVA-----VN
NTE-------NFERYRINTG-------KNAYDDVRVLWKSPLIPADPLVYRKDLPPELKKKIQDFFVNYGKGADAAREKQ
ALATLTYQGFRVSTDAQLVPIRQIELAKEK
>NTL01NS2223_N.sp./1-304
MNR-RLFIQ---QASLFTLTLASSKILSACNSNANDSSAALKEINFGVLSTESQDNQKPIWEPFAAAMSQEVGI-PIKPF
YVTQYAAVIEAMRFGKVQAAW-LGGKSYIEAA-RVANA--EAFAQVV-SADGTRGYY-SHLIANKDNPITAEAKAVGGDK
YVIQNA----AKLTFAFNEPNSTSGFLVPSYYIFTKNNIEPKK----AFKRLIFAGNHEACALAVANKQVDVA-----TV
SNE-------ALSRLE-RTN-------PTARQKIEIIWQSPLIPSDPIVYRQDLPADIKNRLQKFFYNYKDAKVLTPFEI
-------SGFVQAEDKNWHTIRELEIAKKI
>NTL01SMB00842_S.melil/1-300
MLK-KALLS---AVALFALVG-------HAQAEDL------KEFRVGIIGGENEADRLRNYQCLVDQLPAAIGVEKVSLF
PAADYDGVIQGLLGGTLDYAE-LGASGYAKIYLAKADA-VEPILTTV-QTDGSTGYH-SIMVARKDSGITK---------
--LEDL----KGKKLGFADPDSTSGYLVPLVTLPEAIGAPVKE----YFGETGFGGGHENLVLEVVKGTFDAGTTFGSGV
GEFKDGYTSGNLRKMVDKGI-------VDM-NDLVELWKSPLIPNGPIVVRTALNDDMKAKFKQFMMDLPKTDAACFSAI
QGGDF--TGFVEVNSDFYKPIIDARKATIG
>NTL01RD2241_R.denit/1-302
MKK-TLALA---LAASTALST-------GAFAQEI------TEFRIGILGGENAQDRMNSYQCLADYTTEALGV-ETKLF
APADYNGVIQGLLGGTIDMAW-LGASAYAATYLQDPEA-VKPVLIKV-NVDGSIGYH-SIGFARVDSGITS---------
--LDDM----KGKVFGFGDPNSTSGYLIPSIEIPQYKDGMTME-SGEYFGEVKFTGGHEQTIVAVNNGDIDGGVTWADGQ
GNWEDGYNSGALRKAVDAGL-------VDM-NDMVQIWKSNVIPEGPVVLRKALPAQVRETMTALVDGLHERDPDCAYGV
AAGDT--LGFQPVTHDTYISIVEARKAKIG
>NTL01YP1125_Y.pesti/1-306
MKK-ILCLT---SLLAGMMIF-------NATAEDAP-----KEINLGILGGQNATQQIGDNMCVKEFLDKELNV-KTNLH
NASDYSGVIQGVLGGKIDLVLSMSPSSFASIYIKDPNA-VELVGIAIDDTDKSRGYH-SVVVVKADSPYQK---------
--LEDL----KGKAFGFADPDSTSGFLIPNQSFKQQFGGSVDNKYNNFFSSVTFSGGHEQDILGVINGQFAGAVTWASMI
GDYDTGYTSGAFTRMIRMGQ-------PDLMKKIRIIWQSPLIPNGPILVRSALPPEFKAQLVAAIKKLDKEDHGCFIKA
MGGK---QHIGETSLSEYQNIIDMKRELTK
>NTL02TE4991_T.eryth/1-298
MLR-RNFLYASLLTLSFAVISCNQSISDNQTASSTNTTDSRSELIMGLIPAESNEEMVEKFEPMRAYMEKKLNR-PIKVF
TATDYAGVIEAMRQDKVDIAW-FGPLSYVLAE-QEAGA--EAFATGV-RTKTGKSTYKSILVVPGDSTVQS---------
--IQDL----KGKNVAFVDPASTSGGLVPSYLVLKATGQKPKD----FFGKLTYAGSHDAAGMAVKNQTVDAA-----GT
NDI-------TYNKMINKGL-------ISE-ESNRILLESEPIPGSPLAYRQELDEQTKNNIRETVLNAHKDIKVT----
GYGDL--LNYESATPKDYGVVRDMINTLGI
>NTL01TD2300_T.denit/2-283
YVK-HTFSA---SALALVLSL------AAASAQA-------RDIVMGLIPAENNEEMVQKFEPMRAHLEKKLGQ-KVKVY
TATDYAGVIEGMKKKRVDVAW-FGPLSYYLAE-QEAGA--EAFAVGI-REGGTTHTYKSLFVAPCDAGVKS---------
--IKDL----KGKSVAFVDPASTSGGLMPTYMVKKETGMMPQQ----FFGKFTYSGSHDAAELAVKNKTVDAA-----AD
NDI-------TYEKMLAKGL-------ITK-ETNCVVKESDPLPGSPLVYRKDLPAATKKKIRDAILNAHKEIKVS----
GYGNL--SHYVAVAPKDYQMIRDMVKDLGL
>NTL01BJ7946_B.japon/2-304
ITR-RLVLA---GAAALAFTT-------SASADDWKAKY--SELTFAVIPAENASGVTERWAPFMSYLSKELGV-KVTLR
IANDYAAVIEGQRAGNIHIAS-YGSASFARARLTGVKT--DAFANDI-NADGSTGYY-SVFFVKASSPYKS---------
--IDQL----KGKNLGLVDPNSTSGNNVPRFELDKMGIADADT----YFSKVVFTGSHENAILALAQGTVDVAANQWTSD
DDS-------TLAQMLTKGMLKNADGSPMKKDDFRIIHKSAPIINGPYAYNSDLPEEAKAAIAKAFFDAPAKDKAAFDRL
QDGQK--KGFHPATTKDWDGTIELIKFVDA
>NTL03RP4085_R.palus/1-296
MIKFSTVLA---GALALALTA------SAAPAQDWKSKY--PELVFGKVPDENASGTTTRWTPLTEYLSKKLGT-KVTLR
IANDYAAVIEGQRSGNIQIAM-YGPASYARAYLIGAKV--EPFAIEV-NNDGSKGYY-SVLYVKTESPYKN---------
--IQDL----KGKNLCLVDPNSTSGNNVPRFEM-NKLSIDPDK----FFGKVIYAGSHENAVIGVAQGTCDAAFNWWNTE
AES-------NLLRMDRKGM-------AKA-ADFRIILKSDQIVNSPMAYLTDLPADLKAAIRKAVLDLATDDPETFNKI
YEGKG--KPYDAVDHKAYQPVIDLTKFVDT
>GYMBORF0161/1-293
MRR-RKILF-----LAAFLMGISSWVPGLAQKQNWP-----KELVIAEVPVESAADYEARYAPFLDYLKQKLGI-PVRLF
VAGDYTAVMVSQAQGQTHVAF-YGPGSYVDAI-EKANAPIEAFVKED-SLRSGTVYH-SLILSKKGSGIKT---------
--LEDA----KGKDFAFVDPESTSGFKVPMAYFCLEAKIKPKE----YFKRVAFAGTHESVILGIAQGTIPVGVTWDTGI
SIA------------TNKGQ-------IKGIEDLEVIWRSDPIPSSPWAYRKDLPEDLKEALRTAYLEYENTPEGQKWLE
ARGL---KGFEPASDADYDPFRKVNDALKK
>NTL01DS3325/1-289
MFR-RCIVG---IVAAVMLVSMVIPAMAASAPENWP-----AKIRVGFIPTEGNADIKKRFAPLTEHLRNILGI-EVEAF
SASDYAGIITAMAHQHIDFAY-FGPKSYVEAS-EKAGA--QALVMEL-NKEKQPGYT-GIIIVRKDSDMMQ---------
--LDDI----KGRVFAFTDPNSTSGYLVPNVLFARDLKMKPED----YFKQVKFSGSHGASILAVKNKAIEAA-----AT
NNI-------DLDRMIEKGQ-------VAA-DDFRILWRSELIPGAPMAARRDLPQSLKAAFTGAML-MFNADKAGLEKL
QNG-----GYQYTDDSTYDIIRYLKRLKNE