HMM Seed Alignment: TIGR03284

Download Alignment

>OMNI|NTL01AS0456/2-280
RTYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSQGFPLLTTKKVHFRSIVIELLWFLKGDTNVQYLKDHKVSIWD
EWA------------------------TAE-----------------QTARFGRPEGELGPVYGHQWRNFGATQNSDGSY
KNDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDGKLSCQLYQRSADVFLGVPFNIASYALL
THMIAQVCGLGVGDFVWTGGDTHLYANHFEQAQLQLTREPLPLCQLKLNPEITDLFDFKFEDIEIVDYQSHPAIKAPVAV
>OMNI|NTL01XF02333/2-264
KQYLELLNDVLVHGIQKPDRTGTGTRSVFGWQMRFDLSQGFPLVTTKKLHLRSIIHELLWFLRGETNIAYLKKHQVHIWD
EWA------------------------DA--------------------------TGELGPVYGKQWRRWAGADG-----
--HEIDQIRWLLEEIKRNPDSRRLVISAWNVADLPQMALVPCHALFQFYVANGKLSCQLYQRSADIFLGVPFNIASYALL
THMLAQVTGLAVGDFVHTLGDAHLYANHVEQASVQLERVPRPQPVLMLNPAVTDLFDFTYDDIVIEGYDPYPAIKAPVAV
>OMNI|NMB_1709/2-264
KAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPLLTTKKLHLRSIIHELLWFLKGDTNIKYLKDNNVSIWD
EWA------------------------DE--------------------------NGDLGPVYGYQWRNWPAPDG-----
--RHIDQIANVLEQIKKNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALL
TMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAALQLEREPRALPVMKINPEVKDLFSFKFEDFELEGYDPHPHIKAAVSV
>OMNI|NTL02RP3489/2-264
IQYQDLLERILSDGAEKHDRTGTGTLSVFGHQMRFDLAAGFPMLTTKRLPLKAIVHELLWFLQGDTNIKYLHDHGVTIWD
EWA------------------------DA--------------------------NGDLGPVYGAQWRSWPTADG-----
--GSIDQIANVVEMIKRNPDSRRLMVTAWNPADVEKMALPPCHCLFQFYVANGKLSCQLYQRSADVFLGVPFNIASYALL
TLMVAQVTGLKPGEFVHTLGDAHLYSNHLEQARLQLTRAPRALPVMTINPAVKDIFGFRYEDFTLTGYDPHPHIKAEVAV
>OMNI|HNE_0459/2-264
QQYQALLRDILENGHKRGDRTGVGTIGVFGRQMRFDLSEGFPMVTTKRLHLRSIIVELLWFLRGDTNIAYLKENGVSIWD
EWA------------------------DE--------------------------NGDLGPVYGKQWRSWATPNG-----
--EAIDQIQWVLNEIRTNPNSRRLIVSAWNPADVNDMALPPCHCLFQFNVMDGKLNCQLYQRSADVFLGVPFNIASYALL
TMMMARATGLQPGEFVHTFGDAHLYLNHLEQAELQLTREPRDLPTIHMNPDKADLFGWEYEDFRVDGYAPHPHIKAPVAV
>OMNI|NTL06MM1327/13-275
HQYLDLLRRIQAEGVTKTDRTGTGTTSVFGHQMRFDLSRGFPLVTTKKLHTRSIFVELLWFLRGDTNIGWLKDNKVSIWD
EWA------------------------DA--------------------------NGDLGPVYGKQWRSWACPDG-----
--STVDQITQVVEMIRKSPDSRRLIVSAWNPADIESMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIASYALL
THMVAQVTGLEVGAFVHTFGDAHLYSNHMEQAALQLSRAPLPLPRLELNPEVKDLFAFTMDDIKVVDYQCHAHIAAPVAV
>OMNI|NTL02BB2958/2-264
KQYHDLIKTVLEHGVKKEDRTGTGTISMFGYQMRYNLQEGFPLLTTKKLHTRSIFHELLWFLKGETNIKYLHDNKVTIWD
EWA------------------------DE--------------------------NGNLGPVYGKQWRSWETADG-----
--RTIDQITNVVEQIKKNPNSRRMLVVAFNPGDVDKMALPPCHAFFQFYVANGKLSCQLYQRSADIFLGVPFNIASYALL
THMIAQVCDLEVGDFVHTLGDAHLYLNHLEQANLQLTREFRPLPQLKLNPAKKDLFDFTYEDIEIIGYDPHPAIKAEVAV
>OMNI|NTL01LP1551/4-316
DSYLQLARTILEHGTYKDDRTGTGTYSVFGYQMRFDLSQGFPLLTTKKVPFGLIKSELLWFLHGDTNIQYLLQHHNHIWD
EWAFKNWVTSADYDGPDMTNFEHRRLDDPDFAPIYQAQMQTFDDQILTDDAFAAKYGNLGDVYGAQWRHWQTRQG-----
--KTIDQIANVIEMIKTHPDSRRLIVSAWNPEDVPNMALPPCHTLFQFYVADGKLSCQLYQRSGDVFLGVPFNIASYALL
THLIAKETGLAVGEFVHTLGDAHIYTNHVEQVKTQLTRQPRPAPQLTLSGAHDSIFDYQMSDIKLSGYDPAPAIKAPVAI
>OMNI|NTL01LS0999/4-316
QVYLDLARTILEEGHYKGDRTNTGTYSLFGYQMRFNLQEGFPLLTTKKMPFGLIKSELLWFLKGDSNIRYLLQHNNHIWD
EWAFERFVKSTDYTGPDMTDFSHRAQDDADFKVVYQEQMRLFNDRILADEGFAKQYGELGDIYGKQWRAWQTRSG-----
--ETIDQIKNVIEMIKTNPDSRRLIVSAWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSGDVFLGVPFNIASYALL
THLIAHETGLEVGEFIHTLGDAHIYSNHVTQVKTQLARSMHAAPKLWLNPDKKSIFDFDVADIKVENYESEPAIKAPVAV
>OMNI|NTL02LS0695/6-318
EPYLQLIRDILEKGHEKSDRTGTGTKSLFGYQMRFNLAEGFPLLTTKKVPFGLIKSELLWFLRGDTNIRFLLEHNNHIWD
EWAFKNWVESDEYHGPDMTNFGLRAQEDDNFNKVYQDEKKKFCQKIVEDQEFANKFGNLGDVYGAQWRHWQTRNG-----
--ETIDQIKDVIETIKNNPDSRRMIVTAWNPEDVPLSALPPCHTLFQFYVNDGKLSCQLYQRSADVFLGVPFNIASYALL
THMIARETGLEVGEFVHTLGDAHIYLNHLDQVNEQLQRKPNDAPTLWLNPEKKNIMDFEMEDIKVKNYHSHSAIKAPVAV
>OMNI|NT01EF2041/3-315
QAYLDLGRKLLEEGHRKEDRTGTGTLSLFGYQMRFDLQKGFPLLTTKRVPFGLIKSELLWFLKGDTNIRYLLQNKNHIWD
EWAFERYIKSPDYNGPDMTDFGHRCLTDPEFNEEYKKQSKLFCEKILTDDSFAETYGDLGHIYGYQWRHWETKDG-----
--GFIDQIKQVIEAIKKTPDSRRLIVSAWNPEDVPSMALPPCHTMFQFYVQEGRLSCQLYQRSGDVFLGVPFNIASYALL
THLIAHETGLAVGEFVHTLGDAHLYINHIEQMKEQLSREIRAFPTLVLNQEKQSVFDFEMEDIQLEGYDPHPAIKAPIAV
>OMNI|BA_2236/6-318
NEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKGFPLLTTKRVPFRLVASELLWFMKGDTNIRYLLQHNNNIWN
EWAFKSWVESDEYTGPDMIDFGLRSQQDEEFKVQYDEQMELFKKNVLEDDEFSNKYGYLGDVYGKQWRAWKTTAG-----
--ETLDQLKDVIEMIKKTPDSRRLIVSAWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLL
THLIAHECGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEGYDPHPAIKAPVAV
>OMNI|NTL01OI1740/5-317
QAYLDLCKQIFKTGEQRGDRTNTGTHSIFGHQIRFDLNKGFPLLTTKRVPFRLVASELLWFIKGDTNIRYLLKHNNNIWN
EWAFEKWVNSADYQGPDMANFGLRSQKDENFNKQYQEQMELFKTRILEDDSFADKYGDLGSVYGKQWRNWKTTQN-----
--ETIDQLKDVIHSIKTNPNSRRHIVSAWNPEDIPTMALPPCHTLFQFYVSNGKLSCQLYQRSADVFLGVPFNIASYALL
THLIAHECGLEVGDFVHTFGDAHIYSNHVEQVETQLEREIRDFPQLIINKDKNSIFEMDLDDLVIENYNPHPSIKAPIAV
>OMNI|NTL03SS1312/7-318
QAYHQLCEEILEIGKQKNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLIATELLWFIKGDTNIKYLLQYNNNIWN
EWAFEKFVQSKDYNGPDMTDFGHRAQKDESFNLIYKDEMNQFKKRILNDDDFAKKYGDLGNVYGKQWRDWEDKYG-----
--NHYDQLKTVINQIKTNPNSRRHIVSAWNPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYSLL
THLIAKECGLEVGEFVHTFGDAHIYSNHIEAIETQLARESYNPPTLNINSD-ASIFDIDYEDLEIVDYESHPAIKAPIAV
>OMNI|NTL01LM1866/2-314
KQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPIMTTKRVPFKLVVSELLWFLHGDTNIRYLLQHNNNIWN
EWAFERFVKSDDYKGEDMTDFGLRAERDPAFKEVYQAEMEKFKTRIIEDEAFATKYGELGNIYGKQWREWKTSQG-----
--ETIDQLADLIEMIKTNPNSRRLIVSAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALL
THLIAREVGLDVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHALPKLVLSDKPATIFDFEVADISLDGYNPDPSIKAPISV
>OMNI|NTL02MP0545/2-286
KQYLDFLKWVLEKGKHKENRTSVDTISAFGYQMRFDLSKGFPLVTTKKTNFSAIAHELLWFIKGDTNIKYLVDNKVNIWN
QWPYESYKKSQDFQSESLKEFIQKIKDDN---------------------EFAQKHGNLGPVYGKQWRDFLG--------
----IDQLKKVIEQIKNNPNSRRLIVSSWNPSEIDTMLLPPCHTLFQFYVNDNKLSCHLYQRSADAFLGIPFNIASYALL
TFLLAQETNLEVGDFVHSIGDAHIYVNHLEQVKTQLKRNPKELPKLIIKN--KNIFEINFEDIELVDYEFDPIIKGEVAV