HMM Seed Alignment: TIGR03170
Download Alignment>OMNI|NTL02BSA3187/285-420
WTVYLQAKVTVQATYYVAARQIAPGEPLSAADLVARDGDLT-VLPLAVITDP-AQAIGATALARISAGLPLRQDMLKSAA
SVSAGQTVRVVAAGPGFTISAEGSALANAAPGQSVRVR-MAAGQIVTAIVKDAGTVEIP
>OMNI|NTL01REA2161|Reut_B5624/155-290
WIRYMQARVSVLSDYYVAVRALGPGEPVTPADLEVRQGDLS-TLPKAVITDP-SQVVGAVTANRVAAGSPMRTDLLKKSI
AVRSGQTVTVAVEGDAFQITSEGKVLADAAIGNSVQIR-LRNGQVVSGLVRSGDTVVLQ
>OMNI|NTL01RSA0341|RSp0341/159-294
WAAWVPATIQISGTYYVAARQLPPGKTLDMGDLEARTGDLS-ALPPSVILQP-ADAVGRVLLTSLAPNQPLRAESLRMPI
AVQAGQTVKLVADGGGFQVTSDGRALNQAAVGQVAQVR-TANGNVISGIAQSAGVVAVQ
>OMNI|NTL03NM1318|Nmul_A1318/112-247
WTIYVRATVKVVAEYLVSTRPLRQGQVIDASDLTSRKGDLT-QLPPGIVTDW-NQAIGRTLGGNLPFGSPLRQDMLRAQT
AVIQNQTVKLVSSGRGFSVSAEGKALTHATEGQPVTVR-SASGAVVSGIARAGAIVEVT
>OMNI|NTL02DA0748|Daro_0748/89-224
WSVLVPVQIAVTGNYVTTTRPLAAGQLVQPGDIATMSGDLS-QLPTGIVTDP-TSAVGKTLRNSLGAGQPLRSDQLLPTL
VIRQGQSVRVISQGAGFAVSSEGKAINNAAEGQVAQVR-MPSGQTLSGIAKADGSVEVS
>OMNI|NTL01NE0301|NE0301/94-229
WTLYVPVEIEVITRVVHAAQPVSMGKQLEAQDIVSKEADLV-RIPGEVATDP-DQVIGKVATTFLASGQPIRTHQLRAPH
VISRGQKVRLTATGAGFAVSMEGEALAAAAAGEVVQVRN-HTGRIIRGIARAGGVVEIK
>OMNI|NTL01TD1638|Tbd_1638/101-236
WTVYLGADVRLIAAYAVTRHPVPANHVLTEADLTLREGNLG-NLPTDVARDV-GALLGYRTVSGLAAGAPLRAALLRAPL
AVQQGQTTRLVLNGPGFSVQTEGQALANAGRGERVRVK-TRSGQVVSGVAQDGQQVVVA
>OMNI|NTL01XC1924|XCC1954/144-280
WRLFVPLKVRRNQDVLVLRRGITSGETISLADISIEKRDAA-RIVGAVLADP-ATAVGKTARRILPAGTLLSANDLVTPR
LVRRGDTVPLVSRNGGLEVRMSGRALSDAGENERVSVENSSSRRVVQGIVEASGTVVVS
>OMNI|NTL01NO2683|Noc_2683/98-234
WTVYLSVKMAVYGKVLVATHSISSGFPLSLVDLRLERRDLS-ELRQGYLNEP-AQAVGKRLKRPVGLGAIITPGMLEIPK
LIRRGQQVILMATAPGLQVNMKGQALEDAGAGEHIRVRNTSSRRIVEGTVTAAGLVQVQ
>OMNI|NTL01CV0999|CV_0999/85-220
WSLRIPVRINEKRLGVVLNRAMMAGETISGGDVRLVDISNP-ALAGNVLTDA-SQAVGQVLRSGAPAGAWVRNFMVRAPY
LVRSNQRVKVQAQGDGFSAEAEGTALGNAAQGDQISVR-LSTGRVVLGVVQADGSVAVV
>OMNI|NTL03RF3713|Rfer_3713/110-245
WNVFLPVTIKAYGQAWVVKGQVSAGAALTQDDVMEAEVDWA-EQREAIISNP-DQWLGQVANRALTSGQALRQGMIRPAE
VFRAGAQIRVQVQGAGFEITSDGQALSAGVVGQPARVK-MNNGHVMSGEVLDSRTVRLE
>OMNI|NTL01YP1697|YPO1798/96-231
LRRFIQTQVQVSGRYAVAVRRLAAGEKISAQDIQMKQGRLD-TLPPGALLDA-HFAQGAVSQRQINAGQPLTRNMLRRLW
LVKAGQDVPVLAQGDGFNVNSNGKAMNNGAAQETIRVR-MPSGQIVSGTVADDGTIRIM
>OMNI|NTL06EC1683|ECA1701/86-221
QRRFIQTEVQVTGNYVISSRPINRGTALTEKDISLTKGRLD-LLPLRPILTL-QGAQGAVILRDLTPGQVITTSMIRRAW
IVKAGQSVQIIAQGEGFTINGEGKAMNNAAAGQAVRVR-TANGQIISGITNEDGIILIS
>OMNI|NTL01ST1139|STM1173/83-218
EKRYLQVNVQATGNYVAVAAPIARGGKLTPANVTLKRGRLD-QLPPRTVLDI-RQIQDAVSLRDLAPGQPVQLTMIRQAW
RVKAGQRVQVIANGEGFSVNAEGQAMNNAAVAQNARVR-MTSGQIVSGTVDSDGNILIN
>OMNI|NTL01PL1912|plu1914/83-218
QRKFIQVAVSVTGNYLVTRRAISRNDVLSDKDFQVRRGLLE-RLPHDLVINK-NEIKNSIAIRNIPAGQAITHNMLRRPW
VVRSGQSVAVIIQGNGFQIRNEGKAINNAAISDKVRVR-INSGHVITGQALENGNVKIM
>OMNI|NTL01SG0029|SG0029/91-226
RRYFLQIKVSARGDYWVAARGLPSGTALGSKNVARENGELA-GQPRNVIFAT-QPVTGSLTTRAIQAGQPLTANMLRAPW
KVRQGNPVAVVSRGPGFQVRHYGKAMSDAAVGDALRVR-LASGQMVSGAVDNQGVVLQN
>OMNI|NTL01BA00320|BU336/90-225
QHYYLTVEVQSEGEYIVANRKIPRGTRIKESDLKILIGRLD-VLPNNTYRKK-KDVVNRISLREFFPLQPITSFMTRPFW
LVKVNQQVTVIINGNNFKMSSKAKSLSNGAQNQNIRVK-TNSGKIINGIINENGEVIVS
>OMNI|NTL01WB0037|flgA/88-223
KEHLLKIFVKSYTEYYVASKLIRSGTIISEKDIKIVYGNTK-NIPQNIILSN-QKISGKISTISIGIGQPITTSMLKSPW
IIRQGDKVPVIFVGNGFTIKCFGISIRNYTIEDIVKVK-LPSGKIFQGVLNKNEALVFY
>OMNI|SPO_0176/6-138
PILALVLAQTAAAEVLVPTRTIRAKEIIGAEDLMLKSAEVP-----GSFTDP-AEVIGQEARVALYAGRPIRYADIGPPA
IVDRNDLVTLFFDNGPLVITTEGRALGRGAAGDVIRVMNLTSRTTVSGQIRPNGSIEVK
>OMNI|NTL03RCE0907|RRC03406/7-139
ALVLLTLPALAEAGSVVAARTLRAQTVITESDLALSEEDVP-----GALTDP-LSAVGLETRTAIYPQQPISAADLVAPA
VIERNQMVPLAYRDGSLSILTEGRALDRGAVGDTIRVMNITSKATLFAQLGADGVAYVQ
>OMNI|HNE_0257/6-135
ALGFTAFVALTDASSMIASEVIRAGDIVTPVNASAETGDVA-SME--------EPVIGREAKRTIYAGQPVTMDNTRPAR
LVTRNQIVTVKYIHGGLEISTTGRAMGEASLNEPVTVLNLESRQMVQGIVQESGWVLAQ
>OMNI|NTL01SM00663|SMc03031/30-166
CLLSPAAALAEPPTAVIPKQTIYPGEKLDASMLEVVDVTNP-DLRDGYVRSI-DEVDGMVTKRTLLPGRVILASALREQY
AVERGSTVRLVFNNGGLTITAAGSPLQDAAVGDLIRVRNVDTGVIVSGTVMADSTIHVV
>OMNI|NTL01AT0538|AGR_C_971/8-144
SLGALAPALAQAPMALVPVRTIYPGEAISPEQVKSVEVTNP-NISAGYASDI-SEVEGMISKQTLLPGRTIPIAALREPS
LVVRGTSVKLVFHIGNMTLMASGTPMSDGSLGEVVRVRNIDSGVMVSGTVMKDGTIQVM
>OMNI|NTL02ML2250|mlr2917/35-172
SATQIASNQPAGEVVLIPNRVIYPGETIELAALKQVTLIAGKHKPDAMATHA-EELQGKIAKRTLLPGRYIPTAAIREAW
LVEQGAAVQVFFIAGGLTITATAVTLQPGSAGDLIKVRNSDSGKILSGTVMADGTIQVS
>OMNI|NTL01BJ6872|bll6872/35-172
VLVSARVAAAEEKRLPVPAVSIRAGELIRDDMITERAFAPN-LLGVAQFIEGRQILVGRMARRALLPGQPIPTNSVEDPW
TVARGAMVKVVVEDSGLSIVTYGSAMQSGAAGALIPVRNTDTGVIIRGVVQPDGTVKVV
>OMNI|NTL04RP1098|RPC_1098/22-159
TVISASALAEEPARFPVPATVIYPGDLIKDEMIIDRSFAPNLPGVAAFVGDR-PAVVGRIARRTLLPGQLIPINALEEQK
LVSRGSVVKVVVEDGSLSIVTYGSSLQAGSPGSMIQLRNLDTGVTIRGIVQPDGSVRIQ
>OMNI|NTL01ME2471|RMQ05511/15-152
PAQAVEGMANAELMLPVPTVTIYPGDTIKESMLRMQAYPATYRARTAVIDAS-AAIAGRVARRMLLPGEPVPVNAVDDPR
LVSRGAPTQMIFEENGLVITAVGAPLQNGGLGETIRVRNTDTNRIILGTVMADGRIRIG
>OMNI|TM_1541/146-282
TYVTLNMLLRKERNVVVLKRNINVGDVIKEEDVRLEKRNVF-EIYGEPFFDV-SEVVGKISRRYLKEGTVLTADMVKDPP
DVVKGQVVPAYVDMGSIKVTTFVEVLENGYLGETVRAMNVESRKYVFGRVERGPVLRIL
>OMNI|NTL01GO0925|GOX0952/172-308
TAFNVSGTATMEVRAVTLRHAMHLGQPILPEDVTMTFVRIG-LIPDDALQSP-EDAVGLEARGVLAAGQVLSVSELAHPQ
LVHRGSPVVATFSGPSLHLTVSGTVLEAGGKGDTVHVYNASSRMVLTGRVVDRTEVEVI
>OMNI|PP_4394/88-224
WTVFVPATVRLFRDVVVVTRPLKRDNTVGEGDVALRERDVG-TLGQGFLTEL-DQAVGMKMLRPTVIDQVLTPQHLEQAE
VVRKGDQVVIIARSGSLSVRMPGEALSKGGLSEQIRVRNLNSKRVVKARVTGPGQVEVS
>OMNI|NTL01HC4497|HCH_04720/99-235
WQIYVPVQMERYRQIVTIKSAVPRDYALAPEDLETKELNII-DLRYGFYTNA-EDVVGMITRRPVNAGSAPYPNMLEAPK
LINKGDMVVIEAATHHFSVKMPGVAMADGRRGQQIMVKNSSSNRMVRAEVIGSGHVRTP
>OMNI|NTL03SD2216|Sde_2216/106-242
WSIYVPVDIEVYSEIVVASRTLRRGATISEADLNVQVINIA-RYGSGHVQDA-QRIIGQELTRSVNAGEAIKLSHVRPAQ
VVSKGDTVVIEVRGNMIAVAVNGEALENGHVGKQIRVRNNQSKRVVDGVVSGPGRVSIS
>OMNI|NTL01PP0029|PBPRA0029/116-252
WKARAKAEVAIYRQLVVAKMTLNRHQEITPLMLSMKRSNVA-YLRHGYFTSK-QALTGLTSRRKIVAGKIISPRMVEQPK
LVQRNDGVLIEAKFGKMNATMKGVALESGVKGDSIRVRNLSSQKEIYAIIVGPQKVRTN
>OMNI|NTL01YP0687|YPO0721/96-232
WEVVATVKPDIYLPIWVAKQTLERGRKVQADDIELKKKNIT-GVQGGYITDP-DEILGLTIKRRIRQLQAVIPSQLEQPV
LVTRNQHVLMLAAQDGIEAQMLGIAQKNGRKGELIKVKNLSSGRVVTATVDGSGRVRML
>OMNI|NTL01VPA0263|VPA0263/99-234
WRINVTIKSSVTLPVVVAATTVGRSEVVTANHLKLETRTIS--RSDDFYTAP-KHAIGLETTRRLRAGQVVDPTSLSAPA
LIEKGNEIIIIASKDGFSASTKGVALEDGAQGQQIEVENLSSGRVIRAVVTGRNQVHTQ
>OMNI|SO_3253/101-234
WQIFISVRVDILFPVVVATEPLAPGELISPTQVEIRYVDQN-SLRGMQFSDI-NQLSGVRVKRRVAKNNPIFANNL---C
FVCKNDAVSIYVRSSNFVLKTVGEALQDGNIGDQIRVKNSSSNKELDATVTAIGEVEVR
>OMNI|CPS_1473/96-229
WKIYLSAKVEITKAVLIAKNTISKGDKLDESNVELAFIAIN-KIRGNKLTDT-NIVFGAKAKKRIAKGRAISKRSI---C
LICKGDVVTIIVSSDNFSIKTQGVALSSGNINEQIRVKNTRSKKVITPRVKGINQVIIH
>OMNI|NTL01IL1146|IL1150/106-239
WRTYVPVRIYRYKNVVTAASPMAPGQMISESDLVFSEVDLN-RVRSNVFTDM-TALVGARIKKRIAAGQAISASDT---C
LVCEGQSVTIVAQDKTLRITAAGRALADGLKGESVVVENARSNKSIQAVVTGLNEVTVN
>OMNI|NTL01VP0772|VP0772/114-247
WKVYVPVRVSSSVPMIVATRQLGRGEIISASDVTTSMIELQ-RFRKDGFSSF-EQVVGAKLKRSVRLGDVVERNDV---C
VVCRNEKVTIKAVKSGMTITTQGTALQDGATGDQVRVKNDKSQRIIEGIVTDIAEITVT
>OMNI|NTL01VF1880|VF1880/121-254
WKVYVPVKTELMMPLVTAISSLSRGHTISSSDLTLTMVNSRTYQRGGYINV--DDLVGARIKRSVRAGETVEKNDI---C
MVCRNDSVIIKAVKGELSIITKGTALGDGALGDKVNVKNDKSNRIVNGIVTSVGEISIR
>OMNI|NTL01PP0854|PBPRA0898/101-234
WQVYVPVRVQLLLPRVVAATPLARGLVLNASHLSVKLVESR-FQRGIVFEQP-AEIIGSKVKRTVNIGEAVQGNDI---C
LVCRNDAVMIKAGNGGLNIITNGTALSDGALGEQIRVQNTKSKRIIDGIVSAVGEVTVN
>OMNI|NTL02PH0733|PSHAa0765/101-234
WAQYVHVRVTETAPVVVANVNLARGEVITAAHLSIEMRSTH-FIRVQYLDNP-ALLIGSRSKRNIRSGMPLLLSQI---C
MVCKGDAVNINANIKGLKVKTTGIALEDGSLGEQVKVKNKKTGKVLNARVDGVESVQVN
>OMNI|NTL02LP0944|lpl0940/96-232
WTLYIPVKITIFKSVLVAKRALLKGTKISNSDIYQTELDVQ-KLKQGYFTDS-KELIGLVCKHDITPNSPLNPFNIELAK
LVHKGEQVSIIAAHDNLTVSMDGVAMDEGALGDSVKVKNLSSKRIIEAQVTGKKTVKVT
>OMNI|GPMORF0732/179-313
KKLRISVKYRKLRRVIAAKRYIKKGEIITEEDIRFIKTDKN---VRKPFTDI-KDIVGSTAKIDISENDVITERMVIPDY
KVKRKDYVKVIYSRNSIRIEIQGVALENGKLGDLIKVKNISSGKVLICKVIGKDTVLYT
>OMNI|NTL01TC1477|Tcr_1477/109-245
WKVYVTALVEGDVPVVVTTKAILKQAVIHKEDVKQILVPYQ-KSKTGALIDV-DSAIGMRAKRGLSPNSILTVRQLQPPY
LVLEDNNVTIITYIGNIKVKSLGKALEDGVKNQQVPVENLSSKKIIKGIVIAPNTVLVP
>OMNI|GSU_3050/111-247
RNIPVTVDVEALADAVVAAHPLARGDIITSDDVTVQKRDIS-SVNGRVYRSI-DEVVGKRVKNAVRANTPLSGASIEKVP
LVKSGQLVTIIAESPALRLTATGKARGNGAEGDIIKVQNMGSLKEIPARVIDVGTVQVD
>OMNI|NTL01PC1155|Pcar_1155/104-239
KNMTLFADLEALAPVAVAAADLPRGTILQAEDLSMVTMDLA-GLRAPCLDA--QQMVGKKLRRPVRMGAPFTQTGLETPP
LIKRGDMVTITASVGALTVTTRGLAQESGIADETIRVKNIRSKKEIFCRVTAPSAVEVE
>OMNI|NTL01DP2682|DP2682/179-314
KNLSIRGKLKAIAPVLVAREALRRDTELSPNNFSIIRRDIS-NISDPLFSA--RQAEGQRLRRRIRKDDVIRASSLEHVP
VVHRGDRVKIHLLSGNLQVVTLGVARADGGVHDFIRVQNINSKKIIYCQVVAPGIVKVK
>OMNI|NT01MC3223/117-253
AVVDAVVVIRKNVTVAVLKRQLKRDDIVALGDIDWQTIQIS-REGFRYVSDV-REIVGKAASRPVRANIALQASWFEEPV
AVERGDRVRVLLKDGALVINTVGVAGKDGRVGEAILVRNLSSNKSFLARVMAPGQVVAE
>OMNI|NTL02PS6695|RB12178/322-458
CEGIVRVTFTPKTAVVVARRPLQRGHRVGPGDVHFQPSPVN-ELSGDRVMDV-DEVMGMEVVGLIRSGVPLRPSDFAAPR
LVRRGDLVEVQVSGGGIRVTTTAKALGDGAHNELIEIETLSPKRRLLAKVVEPSVVEIV
>OMNI|DVU_0514/176-310
RRFTGTAFLDVWLTVPCAAQPLNRGDRLEVEKVTWMRKNIA-HLRAAPWDGR-GGPW--QLQRPVGAGQVVYQDDVAPNP
AVTRGGIVTLVYESPALRLAVQGEALADGMPGETIQVRNLQSRKQVYATVRDGSTVVVR
>OMNI|NTL01BJ5829|blr5829/182-317
TKLRFTGTAIETVEVAVLTRDIDRADLLKSSDVALERRPKA-EVTGEAASR--DRTIGMQLRRPMRAGTPIRVADIVKPD
FVQRDQNVTIIYQVPGLYLTTRGKAIESGAEGDTVSVLNLQSKRTLTGVVTGRGQITVQ
>OMNI|NTL01ME1558|RMQ01968/197-333
ASLRVAGVAVETREVAVLTRSLNRGEAVAGADLTVERRPRD-GVPNDVQGAP-TLVVGQVAQRPLSAGAVLRSGDVAPPD
LVARGDSVAIVFETPGVSLSLRGIANESGRLGASVSVTNAASKKVLQAVVIAPGRVSVG
>OMNI|CC_2065/115-249
AGARLAGAPRANVEVLAYARSLSAGEIVQPQDLIWVK--MA-GAPADAPRDA-DAVIGLAAKRPLREGAPVGMKDVAAAQ
VIKSGDLITITYEDGGISLSLQGKAMAAAAAGDVFAVQNTLSKKIIQAVAVGPGAAAVG
>OMNI|NTL02RR2843|Rru_A2844/212-348
ERVRISGRLYETREIPVLSRRVGRDEIIGPRDVSFLRERLD-RLPPDAITDA-ADLVGMAPRVAVRDGQPLRRADVVRPT
LLKKGALVTMELRMPGIAVSAQGRALDSGAEGDTVRVINTASNQTILATVSGGNRVIVQ
>OMNI|NTL06MM3494|amb3494/178-314
VRFKVMGSVYASARIPVLAHAMGRGDVIREDDIQWVDVREE-VVRRDIISNA-RMLVGQEPRYQLRAGVPVRTNEVQKPV
VVAKNSSVTIMLRSKFMTLTAQGRAIEDGSVGDVIRVTNVQSKQTVDAKIEGPGQVSVM
>OMNI|NTL01CV1700|CV_1700/100-235
WRGGVIVRAAVSARVAVAARDLPAGVALAPQDVAWARRPVG--DPADLFGQA-SPPQGLASRTPLRQDQPLRRRQLQPPQ
WVKRGDAVSIVARQDGIEVTSAGEALANGRQGEVIRVRNTSSNKIINARVSAQGEVAPL
>OMNI|NTL02BB0485|Bd0532/175-310
QIKWISGTIRVSKLTPVTTRLILQGERVQADDLRMSMTDVT-FAKDGSLRM--EDIQGQMAARSLPVGSTVWASDLKREP
AAKKGQIVKALLGDDSFEISVNMMAEDSGFVGDLIKVKNLETQKVLSGLVTEKGVVKLQ
>OMNI|NTL01HC3876|HCH_04084/192-327
NSAPVWFDVSAMGEVWTPSTDAEKGTAVDVHPLKREFIDVA-AAGIEPASR--REIEGKEFSRRVESGQPITKDVLRAIP
EIKNGDIVFVEVRVGTVFLRSRAEAMHDAYIGDRIKLKSVSSGETMLGVVLSAGRVWIG
>OMNI|NTL01CJ00722|Cj0769c/86-220
KNVFFRYFIQANLEVLKSERAIKRGDKLGAFDYKSVLIDFD-KVPLNALTL--DDVDNLVAKSNINKNAILRANMFKTTA
LIRRNDPIIGVLSEANVDVLIELVALQSANMGERIRAKN-KEGKVMQGIVVGKNRMIIQ
>OMNI|NTL02HP1359|HH_1359/170-305
KKITFAYMLEGTLEVLKSTQNINVNDTLTPQNTRAERITFE-RVGAEYIST--QEIYNSGAKSYIRVDTAITKDKIKPRI
IVKKGDKIRVFSREGGITTEIVLVARQNAVHNEIINAQNPNSGKIIRVKITDEGKGEIL
>OMNI|HP1477/84-218
LRLPVRYSVIGSMQAFKSVSAIKKDENITANNTQKERILFG-ALSNPLLE---GAIDKVSAKNFIPPNTLLSTDKTQALI
IVRKNDIITGVYEEGQISIEISLKALENGALNQIIQAKNLESNKILKAKVLSSSKAQIL
>OMNI|NTL01WS0568|WS0610/184-319
RKSFFRYEIDATLEAIFTKETLKGGDVLDSGSVEIKRIPFE-RITSEWMRK--DQVGKVSVKSYTSPETLLTQDRIIPKI
VVRRGDVIRVRIQEGAVSLEFSATAQQEGAVGSKIRVRNEKNKKSYDVKIIDPMTAIIE
>OMNI|NTL02TD1123|Tmden_1123/155-289
KKLFFDYNIIANVEVYKSKDSLKKDTNLSPSNTFKKSVRLD-RFRDKPLQN--IYKTSLQVKRHIQKDAILTIRDVEIAD
VVKRDSNINVTMHRDGMDITFSAKAQKDAKVNDIINVQN-SSGKILKVKVTGSNSAEIE
>OMNI|NTL03LI1291|LIC_11325/162-296
HTLRIRFQVEQMVTVLKAKRSLNQGIKITNEDFQEEEI----FTSEEILDSPGNELLGSTLLKNMNEGEIFRKKHVRKIQ
DVQRGGEILMIYHKGSLVLKTKVKALSSGNIGEEVQVTTHSRENQMKAKVVDKNTVVTE