HMM Seed Alignment: TIGR03162
Download Alignment>OMNI|NTL01PL2979/3-181
LFLVRHGQTE-ANLSGVFCGMTDVELTETGINQARQVARYL----SAVTFSQA--ISSALRRARHTAEIIL------AGH
SLSA-NIDTQLNEMHFGAWEMRHHRDLQHEDAEAWAAWLADWQQASPTGGETFSAFAARIENVVQQLLTP--ESQDNLLL
VAHQGVLGLLLARLLAI----PPAAMWH-FHFEQGTYSVV
>SP|P39701|COBC_SALTY/3-181
LWLVRHGETE-ANVAGLYSGHAPTPLTEKGIGQAKTLHTLL----RHAPFDRV--LCSELERARHTARLVL------EGR
DVPQ-HILPELNEMYFGDWEMRHHRDLTHEDAESYAAWCTDWQNAVPTNGEGFQAFTRRVERFISRLDAF--SDCQNLLI
VSHQGVLSLLIARLLTM----PAASLWH-FRVEQGCWSAI
>SP|P52086|COBC_ECOLI/3-181
LWLIRHGETQ-ANIDGLYSGHAPTPLTARGIEQAQNLHTLL----HGVSFDLV--LCSELERAQHTARLVL------SDR
QLPV-QIIPELNEMFFGDWEMRHHRDLMQEDAENYSAWCNDWQHAIPTNGEGFQAFSQRVERFIARLSEF--QHYQNILV
VSHQGVLSLLIARLIGM----PAEAMWH-FRVDQGCWSAI
>OMNI|NTL01CA1366/4-177
ITLVRHGETD-SNRNKKYLGWTDVELNEKGIAEAEMVRDKL----RDTKFDFV--ISSPLKRAKATAKIIR---------
DTNI-IYEDALKEINFGLWDNLSYKEIKDKYPDECEKWSSDWKSFVFPQGEGPKEMYTRVSNFMNKLKGM----EGSILI
VTHGGIIRSTIAYLLEM----GIEGAWH-FATNNCGITVI
>OMNI|NTL01LI1103/3-179
LIFVRHGETD-CNALKKYCGQMDVALNENGIRQMKRLQERL----TDYSFDLV--VTSDLMRVNQSAALLS------NRK
PIRF----PGFNEMNFGDFEGYTYQEISTKFPVAWDDYCSNWQTAPFPNGESFPVFYERVIATFKAEWENW-QKLDTVLF
VGHLGVLRAIALFLQDQ----KIAQFWD-TDFKQGCYSLW
>OMNI|NTL01LM1141/3-179
LIFARHGETD-WNVAKKYCGQLDVPLNEHGVQQMKHLREKL----EDYSFDLV--VTSDLMRVKQSANILS------NAK
TVRF----PALNEMNFGDFEGYTYQEISTKFPKAWNEYCNNWQTALFPNGESFPIFYERVVEVLEVEMEKW-QQIDTVLL
VGHLGVLRVIALFLQKQ----TIAQYWD-IDFKQGCYSLW
>OMNI|NTL02CB0817/3-186
VYLVRHGETE-HNKRKNFYGKLDVGLNEKGEKQSYKVGELL----KDVKFNKI--YISDRKRTRETAERILERNRFYDKE
KNII-YKDEKINEIDFGLFEGKSYEEIVSLYPKEQEKWEKDWKNFAPPKGESAVVFYNRVENFMKHIQKE---EDGNYLI
VTHGGVIRMIYSYILQN----NMDFYWN-FASRNGDITLI
>OMNI|NTL02CT0604/3-180
IYLVRHGETE-KNTLKKYYGNLDVGLNEKGKMQCEYLREKL----RNIELDKV--YTSEMKRAIETANIIL------QDR
EYKI-TKDNRLNEMNMGDFEGKDHKELEKLYPKEWNAWCEDWKECSPPKGESYKTFYYRVKEFIEDVLKE---EVENILI
VAHGGVIKSIYTYILGE----DFDIFWK-VSSRNGELSLI
>OMNI|NTL03MT1105/6-184
VYLVRHGETE-WNNSGRYQGHSDIALSPNGRRQAELLRERF----CRVHLDAV--FTSDLRRARETAAIIA------APH
GLKI-NEVPALREINFGVWEGLTYQEIIANHPREWEAWRQDPGATIIPGGESFQQVKERALAAFNGILDR--ERGRNLLV
VAHGGSLRALICGILGL----DLTAVWR-FRLDNTGVSVV
>OMNI|NTL01GM0469/7-186
IHLIRHGEVEGAGPVRRYNGHTDVALSERGRSQYHAIKERF----ADAPITAL--YTSDLRRCAWGAEVLG------SHL
GLTP-VRKPELREMGVGIWEGKSWPELMEQYPAEWQARLDDIVNYRVPQGESVLDVHGRVMPVINDIVER--HRGEEVLV
VAHGGVNRIILLNAIGA----PLSSLFA-IEQTYCCLNII
>OMNI|NTL01PC2740/20-198
LYLVRHGQVE-GFGQRRYNGQADVALTALGWEQYRSLKSRL----QECPLQAV--YSSDLSRCFEGAKLLG------EPH
GLEP-LPIPALRELHIGRWQGITWAELQERFPQQWQARLNDIVHYRVPDGESFQDLSRRVLPALKDLLSP--HAHGDVLV
VGHGAVNRVILLDALGA----PLQSVFR-IEQSYGCLNII
>OMNI|NTL02TD0110/3-176
LTLVRHCEVD-KRYKNCYNGHNDIGLSKNGEFQAKELAQKI----DSLEFDAV--FCSDLRRAK---ESLK------HSL
HVKSAIYSDKLREKSWGEHEGMSYDEIVLR---EKIAYISFLQWIKILDGEPYLDYIKRVKEFFLDYLPS--LKKENILV
ITHAGVIRVLLSIIHNI----SLEEAFS-IKVEYNSITLL
>OMNI|NTL01DC0536/3-181
LIMVRHGETE-TDNCRRYWGHSDIGLSDCGHAQANSLREYL----ASVKIDAI--YSSPLKRCMETAETIA------YGR
PLLV-NKNNDLKEIDFGRVEGLTYDDVVERYPDIAQKWAEGSFDVHFPDGESMAHFAQRVIKFVKMLSKH--KSDDTLLV
VGHGGVFRILICHFLGI----EYKHWWQ-FILGVGSVTVL
>OMNI|NTL01PC0488/6-184
VYLIRHGDTG-EALKGRFVGRQDVPLSSLGQRQSAALGQCS----ELKSCKEA--FCSPMLRVRETVGH--------SKL
DLLC-RQDEDLREIDFGRWEGLSFSEISRDFPAEVDCWARLKPDFRFPEGETYADFLQRIQQAAERIARTAASQSAPLAI
FAHGGVIRALICQWLGL----PAKHYLL-FEVEPASVSAV
>OMNI|HNE_1512/3-170
LILLRHTRPD-VLTGTCY-GARDVGLAATFAGEAEALLPGL------PSFSRV--VTSPLSRCRRLAEYIG------ARA
SCPL-TEDDRLREMNFGSWEGRSWNEIPFT---EIDIWVNDFLHARPHGGESVAMLRARTFEALDAYRKL----GGDTLI
VTHAGVIKAALATD-------ETADSHA-MTLDFGNFVTL
>OMNI|BBFORF1819/15-185
IYLIRHTSVD-VPAGTCY-GQTDVPLKPSFEAEAATVKKEL----DRYAFDAV--YTSPLSRCTRLAAYCG---------
-YPEALRDDRLKEIHMGDWEMQRFDAITDP---RMQEWYDDYLHVATTNGESYQELFGRVASFLDEVRRL---PFERIAV
FTHGGVLMSARIYAEAL----PPEEALR-NLTPYGGIVRI
>OMNI|NTL01BF2439/3-173
VILIRHTSVD-VPKGVCY-GQTNVPLRDSFEEEASITAQQL----QNDVFDAV--FTSPLSRCTRLADHCG---------
-YPDAIRDARLKELNFGEWEMQEFDKICDP---RLEEWYNDYFHVAATGGESFMMQLQRVSEFLNEVSGK---EYKRIAV
FAHGGVLICAQIYAGIL----RMEDAFD-ALTPYGGVVRL
>OMNI|PG_0704/3-173
ITLIRHTTPD-VPAGICY-GQSDVPLRASFEEEAEVVRRRL----SGMDFDAV--YTSPLSRCARLAHFCG---------
-YPDAIQDGRLMEINFGLWEMQRYDHIDDP---RLQDYYADYLRTPATGGESFVMQLERVSNFLEEVTAM---PFGHIAI
FTHGGTILCAQVYAGLY----ELETCFE-HQTPYGGIVML
>OMNI|NTL01HC0931/3-176
LYLIRHTRVA-VPKGTLY-GQFDVALAETFAEEAATIRGKL-----PAAWDLL--YSSPLTRCKTLAQWLG---------
--PAPAFDDLLMEMSFGDWEGRLLTELPQK---EARAWGDNWLTQRTPGGEGFPDLYRRSERFIERLALE--AKGKVALV
VAHSGLLRCLCLQLHPEYCRWDKSKTFS-IPLDYGAVIHI
>OMNI|NTL03SD0632/2-177
LYFIRHTQIK-LTEGTCY-GRLDIPLAGSYFEERALVKARLARLLGDTPAEQIEFHTSPLGRCEALAQYLA--------V
GEAI-SADDRLLEMNFGDWEGKSWAEIPVA---EVDAWAKDTAHYVVPNGESYRDVESRCANFLLELASD-----KTHVI
VTHAGVIKACIKLIKKQ----SLKQVLK-MHIGFGEIISL
>OMNI|NTL02LI4205/3-176
LYLIRHTTPE-IPKGICY-GQTDIPLISDFNSEFQFLLQKI-----NVVFDLI--YSSPSSRCRKLSEFLN------NQY
LSKL-EYSDLLMELNFGSWEGKPWSEIPKK---EYSYWAKDFVNFKVPNGESYQGLYERVSKFLDKILHS--FSDEKIGI
VTHAGVIRTALCKLLNI----PLERGFY-FDLNYGSINKI
>OMNI|BMA_0690/3-178
VVLIRHPAVA-LGTGVCY-GASDVPLAAGAAAGAAGIRRRL-RSLGVARASRV--WSSPLARCADVARALA------GGV
RAPL-EIDPRLREIDFGAWEMQSWDAIGRD---ALDRWSADLMHAREHGGESAAQFVARVRPAFATLAVA----ARTSWV
LTHAGVIRALASHALDA----PLDAMLA-RPIAMGGIVWL
>OMNI|NTL02BSA2597/3-178
VVLIRHPAVG-VEPGICY-GRSDVPLAASADTGAQAVRAHL-SALCAPLPEQV--WTSPLTRCVSVAERLA------HAC
DVPL-RRDADWQEMDFGAWEMQRWDDIDRA---ALDAWAADLMHACAHGGESVARFAARVARRADAVAQF----DGPQWA
VTHAGVIRAFASHVLRV----PLDTVLS-RPVPTGGVVWL
>OMNI|NTL01RS2395/3-177
IILIRHARPA-MAAGLCY-GRTDLPLDEPMDPDAASIADKL----AAHPPQRL--LASPLQRSVLTAQALA------RAT
RLPMPELDARLVELDFGAWEGCPWDDIPRA---ELDRWARDVLHGNPHGGESAADLVKRVTDWAAAMALA---PVPCVWA
VTHAGCMRALAAHWLQR----PVTETMQ-WPLQWGSACGF
>OMNI|NTL03RF2609/3-179
LWLVRHAQPL-IPSGVCY-GAADVAADEQATQQAAAALAAL-----LPQRVRV--MSSTLQRCERLAQCLR------GLR
PDLTYKADARLVEMDFGCWEGQRWDRIPQA---DFDRWTADFGGHRFGGKESVSDVMQRVSSAWDETQRL---RLDAVWI
T-HAGVTRAATLLAQGVRHVAQADQWPR-ETPAFGGWREL
>OMNI|NTL01AE2271/3-169
LHLIRHPRPD-VAAGICY-GQSDVGLAECPATVAARLRPLL------PPLYAL--HASPLARARLLALELG---------
-TPV--FDDRLREMHFGAWELRPYAELGDA----IDVWVTDPLGFCAPGGESARDMSTRVLQWLDEIVAA--RAADPVVV
VAHGGPLRAIAGHLLGL----PPQRWLS-LDFACGHATRL
>OMNI|NTL02DA0151/18-181
LHLIRHPKPM-IDAGICY-GRHDCPALDVLSVAAALLRELP----SGLPV-----WSSPLRRCRALAEQLH---------
ARPI--IDERLAEMDFGRWEGRRWDDIPRA---ELDAWAADVAGYAPPGGESPRQLQQRALGLVDSLAVP------EVVI
VTHAGVIRTLLAHWQGL----PPERWTE-LNFAYGSCTVI
>OMNI|NTL04PS3673/5-179
LDLLRHGETE-RGGGLR--GSIDDALTEPGWQQMRAAVA------GGGPWTRI--VSSPLQRCARFSEELA------QRL
SLPL-HLEPGLQELHFGDWEGHSPAQLMETDAEGLGLFWADPYAFTPPNGEPVVDFSNRVLSAVERLHQA--YAGERVLL
VSHGGVMRLLLAQARGL----PREQLLQ-VVVGHGALLSI
>OMNI|MCA_0464/6-180
IDLLRHGEVD---GGLCLGRGCDVPLNARGWSQMRAMLP------EHPPWTGI--ATSPLRRCAEFAGELA------GRL
GVEL-RVDERLGELGFGEWEGRPWSELYERHGGQLSDFQRRPDRSPAPDGEHYPDFETRVAAAWEELLGL--PGGRHWLV
VAHAGTIRAILRRVLEF----PVTRLFG-IDVPPACLSRI
>OMNI|NTL01VP1307/6-182
IYLMRHGKVD-AAPGLH--GQTDLKVKEAEQQQIAMAWKT-----KGYDVAGI--ISSPLSRCHDLAQILA------EQQ
LLPM-TTEDDLQEMDFGDFDGMPFDLLTEHWK-KLDAFWQSPAHHSLPNAESLSTFSQRVSRAWSQIIND---INDNLLI
VTHGGVIRIILAHVLGV--DWRNPQWYSTLAIGNASVTHI
>OMNI|NTL02VV1477/3-179
VILLRHGKTA-AEAGL-F-GRTDAKVPADRQQAIAEALFAQ-----HDDVELI--VSSPLSRCHELAELLG------QQH
HWPI-QLQADLQEMDFGLLDGVPFDTQDYPWP-LLNAFWQDPANASLPEGETLAEFQQRVVQCWSQIISA---EHRKVLI
ITHGGVIRLILAHLLGV--DWQSPHWYQNLAIENASLTHI