HMM Seed Alignment: TIGR03138

Download Alignment

>NTL04EC3278_E.coli/8-282
QALAGLTLGK-STDYRDTYDASLLQGVPRSLNRDPLGL-KADNLPFHGTDIWTLYELSWLNAKGLPQVAVGHVELDYTSV
NLIESKSFKLYLNSFNQTRFNNWDEVRQTLERDLSTCAQGKVSVALYRLD-ELEGQPIGHF-NGTC--IDD--------Q
DITI--DNY-EFTTDYLENAT--SGEKVVEET----LVSHLLKSNCLITHQPDWGSIQIQYRGRQIDREK-LLRYLVSFR
HHNEFHEQCVERIFNDLLRFCQPEKLSVYARYTRRGGLDINPWRSNNDFVPS-TT-RLVRQ
>BCI_0525_B.cicad/12-288
QLLQKFKLDKSKISYRTHYNPMLLQPIPRTIHRELLGI-SSISLPFQGADFWTLYELSWLNKYGLPQVAIGEMIIDATSD
NLIESQSLKLYLNSINQTCFSSEQELRNTLITDITKCINSQVKITIHSLS-QWMTVPILEF-TGEC--IDN--------Q
SIQIDNDNY-IFNSNLLVNSV--ER-EKVKET----LVSHLLKSNCPITNQPDWGSVQISYYGMRINREA-LLRYLISFR
KYKIFHEQCVEQIYCDIMQFCLPNTLSVYVRYNRRGGLDINPWRSNISYSPV-NR-PLARQ
>NTL03SD1172_S.degra/1-268
--MSSIELGK-QAEYPEQYSPDCLEPIARSLSRSGLGL-NASALPFTGLDVWTGYELSWLDLSGKPQVAIGYFEFDAKTD
AIVESKSFKYYLNSFNQTRFESWAAVQTLMQQDLANASGGDVNVRLEPLS---AVSPLETP-AGQC--IDD--------C
PLEA--AVY-TPDAALLKVEQ-----GEVSEQ----LFSHLLKSNCPVTGQPDWATVWVSYRGNKITPES-LLAYVVSYR
QHQDFHENCVEKIFTDIMAQCAPVELSVYARYTRRGGLDINPFRTNCGAALP-GW-RIVRQ
>NTL01AS2067_A.sp./1-271
MSVEQSLLGK-ETEYPTTYSPSVLFPISRDAAREKYAQIEGISQ---GKDWWHVFELSWLNSDNIPQVAIGRITLPATSP
YLIESKSLKLYFNSLNFHVFASKQELIDLVEKDLSQAANAKVSLELFDVD----SLEISKP-SGMC--IDD--------L
KPER--LES-HPDASLLKLDA--NEQHDADVT----LYSHLLRSNCPVTGQPDWGTVFIRYTGRKHCYRS-ILAYIISYR
QHNGFHEQCVEQIYADIWKNLQPEKLMVYATYTRRGGLDINPCRVSDLSWMPNPI-RLARQ
>NTL05PA0428_P.arcti/1-285
-MSIHGILGEQTTDYPTEYSPETLYPIARSMGRDVIGW-QNDKLEV-GVDWWQAFELSWLNQQGISQVAIARFGIPANSP
FIVESKSLKLYLNSINFTEFGSWAEVQKLIAEDLSKCVQAEVQVELFHLADRHSGLLIAQP-DGIC--IDDALVNSTEKV
ALML------HPDASLLERDS--SD-AQISDGKTFSFYSNLLRSNCPVTNQPDWAALAVSITSKKVVNQANMLRYILSFR
QHNGFHEQCVEQIFADLSQYYEPSKLMVRAWYTRRGGIDINPCRVSDIALLPVPS-RLIRQ
>NTL01DP0168_D.psych/4-276
NINAGIPLGK-QVGHSETYDPSHLFPVARREARKSLGL--ADDLPFSGPDIWNAYELSWLDSKGKPCVALGEITFPCTSE
NIIESKSLKLYLNSFNLTRFTSTARVKEIIREDLSRVAGAEVEVKILTPE-EFTEVTISAP-EGSC--IDD--------L
ELEEEINAY-RPTANYLSTGP-----EETEEE----LYTNLLRTNCPVTGQPDWATVIINYRGKAIDQRG-LLRYIISFR
QHEGFHENCVERIFMDILNRCAPARLTVYARFTRRGGLDINPYRTTHAEHFV-NL-RLARQ
>NTL01RB1294_R.belli/1-273
MTLSNSALGK-KSTYKDTYDPTLLFKIPRIDNRKELGI-VNDKLPFHGVDIWNAYELSWLDKKGKPCVAIFTFFVPTTSS
HIVESKSVKLYLNSFNNFVVDSMEELKRTILQDLSNNTHAEVTGEIFPIN---TKIEFGSP-TGIN--IDD--------I
DIEC--SEYGPPNNSLIKHED-----VLVEEE----LNSNLLKSNCLVTGQPDWGTIIIKYKGKKLKHDA-LLKYLVSFR
NCNEFAEQCAERIFTDIKNAINPEFLSIYIIYTRRGGIDICPYRSTDSNYTLPSSKRLIRQ
>NTL03PA02806_P.aerug/3-276
HPAEHSPLGK-TSEYVSSYTPSLLFPISRTAKWAELGL-SAETLPYRGVDIWNCYELSWLTPAGKPVVAIGEFSIPADSP
NIIESKSFKLYLNSLNQSAFDSREALRAVLQKDLSAAVGAPVGVRLRSLD-EVAEEGIGRL-PGRC--IDE--------L
DIAV--DGYEQPRPELLRCD---AG-RIVEEQ----LYSHLLKSNCPVTGQPDWGTLVVDYRGPALDPAS-LLAYLVSFR
QHQDFHEQCVERIFLDLQRLLQPQALSVYARYVRRGGLDINPYRSLAEVAPD-NR-RLVRQ
>NTL01HC4271_H.cheju/2-274
ELEKHTHLGK-ATEYPEEYSPSWLTPIPRAKSRETLGL--SGKPDFVGEDLWNGYELSWLNSKGKPEVALGVFRIRCDSL
NIIESKSFKLYLNSFNQSRFTSREEVEALMRKDLSAAAQGEVSVTLLSVT-DWRDEPSFWR-DAEN--LDV--------L
DIDV--DVY-TPDASLLPDPV--GD-DVVEET----LSSDLLKSNCPVTGQPDWATLYIHYRGKPLEKAA-LLKYIVSMR
SHQDFHEHCVESVYLTLMQRYQPEKLAVYARYTRRGGLDINPLRSNYPLAAD-NF-KLPRQ
>NTL01CV3750_C.viola/6-279
ATPEHSPLGK-TVSYQDQYDPSLLFPIARQTKRDEIGV-DEAALPFAGVDIWTGFELSWLNARGKPQIGIATFRIPAGSP
RLIESKSFKLYLNSYNQTRMDGIDALAAQLARDLSAAAGAEVAVSIALPQ-AFAAERIAEL-AGEC--IDE--------L
DIAV--DNY-APCPEILSAD---ST-AIVSET----LCSNLLKSNCLVTGQPDWGSVSIRYTGPKIDREA-LLRYLIGFR
RHNEFHEQCVERIFVDVLRACAPTKLTVYARYTRRGGLDINPWRSNCDAAPTDNV-RTARQ
>NTL01BB3330_B.bronc/31-303
MSLSNAPLGQ-HVAYPSQYDPGLLFPIPRATNRASLQL--GATLPFTGVDLWNAYELSWLDARGKPRVAMATFSFPADSP
NIVESKSFKLYLNSFNQTRLPNAQALRDRLERDLAAAAGAPVGLEFISPQ-RFGELNMAEL-DGIY--IDK--------L
DIEI--DTY-EPAPQLLQCA---PG-DEVEET----LATRLLKSNCPVTGQPDWASLQVRYRGRPIDRAA-LLKYVVSFR
QHAEFHEHCVERIFGDIMRACQPRQLTVYARYTRRGGLDINPWRSNFESAPPADV-RTARQ
>NTL01XA3796_X.axono/2-271
NTPEDSTLGR-EVAYPSGYDPSLLFPIPRAAGRQAIGL--TGDLPFIGRDRWHAYELSWLDAQGKPCVATATLHVPCDSP
SLIESKSLKLYLNSLNATRFNSAEAVRTRIATDLSTRAGADVAVEFGLP-------PIDAVGEGES--IDA--------L
DLSI--DDYGPPNAAYLCAH---AQ-PVVEEV----LTSALLKSNCPVTGQPDWASVTLRYRGAPIDREG-LLRYLVSFR
DHAEFHEQCVERIFNDVLTQCAPQWLVVEARYTRRGGLDINPLRSSASVPTPLSIFRDLRQ
>NTL02DA2346_D.aroma/10-283
DPSHASPLGK-ATEYQSHYAPELLYPIPRQLKRSELGI-TDANLPFVGEDLWNAYELSWLNSKGKPVVAVGTFRVPANSP
NLIESKSFKLYLNSFNQSSFDNIAAVSATMSRDLSAAAGSPIIVTLEPLS-ASPLASIGTP-DGIL--LDE--------L
DITC--DRY-QPEPALLATL---PG-ENVEET----LYSHLLKSNCLVTGQPDWAMVVIRYRGKPIDRAG-LLRYIVSFR
NHNEFHEQCVERIFSDIRVRCQPEVLAVHARYTRRGGLDINPFRSTGDYAAPDNT-REIRQ
>CBU_0151_C.burne/6-278
VLHEKSELGK-TTVYPKEYAPHLLLPIPRDLNRKTLNVNVSEPPPFYGYDLWNAYELSWLNEKGKPFAARGEFIIPATSS
HLIESKSFKLYLNSFNNERFADAAAVSQTMKRDLSKRVNESVTVNFILHE---TEIPVAYSPKGSL--LDV--------L
DIAI--DTY-SPDPNLLSTSQ-----ETVTET----LYSHLLKSNCPVTGQPDWGSIEIHYTGPKIDHVQ-LLKYIISYR
NHEEFHEACVERFFMDILRHCRPQELTVQARYTRRGGLDINPYRSTNPTFSVQNH-RSFRQ
>NTL01TC2189_T.cruno/6-277
STADKSLLGQ-TTPYCQAYDPTILFPIPRQEKRDELGF-DLKTLPFTGEDVWTGYEISWLNLKGKPQVGWAEFVFSAEAP
NLIESKSFKLYLNSFNGTRFESEDAVIACWQNDLSQACGKPVGVRFYRLD-ESIVLQ-GNL-PGHC--LDA--------L
DIEV--EDY-QVNPDLLHTD---SD-QIVSET----LNSHLLKSNCLVTGQPDWGSIVVRYEGAQINHEA-LLKYLISFR
EHNEFHEQCVERVFTDIMRFCQPKKLTVYARYLRRGGLDINPYRSNYEQVFDRA--RLVRQ
>NTL02LP0658_L.pneum/11-285
NIANQSELGQ-SSNYDDHYNPKRLYPIPRAPKRQEINL-DPNSTTFYGFDCWNHYEVSWLNSKGKPVVAMAVISYDCHSP
CIIESKSLKLYFNSLNNTTFPDVETVVQTISKDLSHCIGSEVAVNVYPLS-EIASQTIYAAFDGIC--LDK--------L
DIEC--SVY-HVMPDFLSTSS-----ELVEEV----LYSDLLKSNCLVTNQPDWGSVQIIYKGKKINHEG-LLKYLISFR
NHNEFHEQCIERIFADIMRFCQPESLTVYGRYTRRGGLDINPIRSTEPCVFDGQNIRLIRQ
>GCSORF_2538_C.sp./8-286
TELSKLTLGK-STEYCSEYTAELLQGVPRSLNRDDLAL-DPNNLPFIGEDVWYGYELSWLNEKGKPVVAVAEFRFACTSD
NIVESKSFKLYLNSFNQTRFASIKDVEQILIKDLSNIAGSPAKVRLFAVD-HCPALAIAKK-PDNCICIDG--------A
DISI--DNY-QYDAQLLAQAQKKDKSAKVEEH----LVSHLLKSNCLITNQPDWASIYIHYRGKAIDHAT-LLKYLISFR
QHNEFHEQCIERIYCDLQKFCQLDELTVFARYTRRGGLDINPFRSSHTEQAP-FA-RTLRQ
>NTL02PH1922_P.halop/8-281
PDLKGSVLGQ-STEYIDQYTPSLLFPIARKLNRDALNI-DEAALPFKGQDIWTGYELSWLNAKGKPQVAIAVFTFACQSS
HLVESKSFKLYLNSFNQTRFNSRDEVKQHLVKDLTAVVNSLVQVTLYNAD-EYNCLPYTPL-PGEC--IDD--------L
DIEI--DNY-DIDAHSLKS----QSNKTVTET----LHSHLLKSNCLITSQPDWASVIIRYTGEQICRES-LLRYLISFR
THNEFHEQCVERIYSDLSTQLSIKNLEVYARYTRRGGLDINPYRSTHNNDTPFAV-KINRQ
>NTL01IL0851_I.loihi/5-274
DALDHLSLGQ-HTDYPNEYDPKQLQPVPRSLNREPIGL--KDKLPFSGVDLWTGYEISWLNANGLPQVAVGYFAVPAESP
NLIESKSFKLYLNSFNDSRFDTWEYVQQLMETDLSACAGTPVKVKLKQLS-ELEGESVATF-PGHC--IDD--------Q
NISI--SHY-DYQPSLLATEQ-----HETEEA----LHSHLLKSNCLITNQPDWGSVYIHYQGPKLDRAA-LLAYLVSFR
RHNEFHEQCVERIYQDL-KALGMKKLTVYARYTRRGGLDINPFRSDFEPALQ-MQ-RMARQ