HMM Seed Alignment: TIGR03047

Download Alignment

>gi|3334306|sp|Q55356|PSBW_SYNY/4-110
IQFSKGVAETVVPEVRLSKSK-NGQSGMAKFYFLEPTI--LAKESTD--DITG-MYLIDDEGEIITREVKGKFING----
-RPTAIEATVILNSQPEWDRFMRFMERYGAENGLGFSK
>gi|67925021|ref|ZP_00518404.1/4-110
IQFSRGVSETVIPDIRLTRGK-KGDSGTATFRFDSPKI--FDAQSTD--DITG-MYLVDEEGEIVTNEVKGKFVNG----
-KPTSIEAFLIMNSQDEWDRFMRFMERYGKENGLEFVK
>gi|17228296|ref|NP_484844.1/4-110
IQFSRGLDEEVIPEVRLTRSR-TGDTGTATFIFTNPKI--LDQGTTE--DITG-MYLIDEEGEIITREVKGKFING----
-RPEGLEAVYVMKSAQEWERFIRFMERYAQENDLGFSK
>gi|56687379|dbj|BAD80601.1/5-111
IQFTRGIDEPVVPDVRLTRSR-DGQNGTATFYFDEPQA--LVGEVRQ--DITG-MYLLDDEGELATREVKAKFING----
-QPAGLEAVYLMRSPEEWDRFMRFMQRYAEANGLGFTE
>gi|22298036|ref|NP_681283.1/7-112
IQFIRGINEEVVPDVRLTRAR-DGSSGQAMFYFDNPKI--VQEGNL---EVTG-MYMVDEEGEIVTRDVNAKFING----
-QPVAIEATYTMRSPQEWDRFIRFMDRYAASHGLGFQK
>gi|1709848|sp|P51347|PSBW_PORP/4-112
IQFIQGINEEVVPDVRLTRSR-DGSTGTATFRFTNPKI--LDASMADKGEITG-MYLMDTEGQIITRDVNAKFING----
-KPQAIEAVHVIKSPDDWDRFMRFMERYAQDNGLTFTK
>gi|1346875|sp|P49508|PSBW_ODOS/5-113
IQFIKGLDEKVLPDVRLTRSR-DGSTGTATFRFKNPNI--LDKSTAKEGEITG-MYLIDQEGTLETRDVNAQFING----
-KPEAIESIYIMKSPEAWDRFMRFMERYGESNGLVFTK
>gi|1346874|sp|P48264|PSBW_CYAP/4-109
IQFIQGVDEEAIPDVKLSRSQ-DGANGIAKFYFDKPTV--FD---VYQGEITG-LYLIDEEGELSTRTVYAKFING----
-KPQSIEASYIMNNREEWERFIRFMERYAKQNDLSFTK
>gi|6093825|sp|O78418|PSBW_GUIT/4-112
IQFIQGVNEDVIPDVRLTRSR-DGSTGTATFRFANPKV--LEAQSSVKGNITG-MYLIDEEGQLVTRDVNARFVNG----
-KPQGIEAVYIMQSKEDWDRFMRFMERYSEDNGLSFTK
>gi|87302778|ref|ZP_01085589.1/4-110
IQFFRGVDEPVIPDIRLTRSR-DGRTGQALFVFEQPQA--LAPEAMG--DITG-MFLLDEEGELVTREVKARFVNG----
-KPSALEATYTWKTEADFDRFMRFAERYAAGHGLGFAE
>gi|30468121|ref|NP_849008.1/4-108
IQFIQGVDEDIIPTVRLTRSR-DGQTGTAVFRFVQPKL--LQQQG----EITG-MYMIDEEGEIVTREVQAKFVNG----
-QPQIIEALYVMKNAQAWERFMRFMNRYAEAKGLSFQR
>gi|78779258|ref|YP_397370.1/9-115
IQFYEGTDEPVVPEIRLTRSK-DGTSGQALFQFEKPQA--LSSITDG--EITG-MRMIDAEGEILTREVKVKFVDG----
-EPIFLEAVYIWKSTSDFDRFMRFANSYAKSNGLGYSE
>gi|33862877|ref|NP_894437.1/10-116
IQFTRGVDEPVVPDIKLTRSS-DGRTGRALFVFDQPEI--MAPETWA--GITG-MFMIDEEGELVTREVNARFVNG----
-KPSALEVTYIWKSEADFERFMRFAKRYAACNGLGYSQ
>gi|34907246|ref|NP_914970.1/12-119
IQFIQGTDEQTIPDVRLTKSR-DGTNGVAIFTFDQPSV--FDSSAEL-GDITG-FYMIDDEGVLQSVDVSAKFVNG----
-KPALIEAKYVMRTPREWDRFMRFMERYSQANGLQFVK
>gi|78184846|ref|YP_377281.1/10-116
IQFFRGVDEPVVPDIRLTRSR-DGRTGQATFVFEQPQA--LAPETFG--NIGG-MWMVDEEGEMVTREVNGKFVNG----
-IPSALEATYTWKTEEDFERFMRFAQRYADSNGLGYSQ
>gi|110167086|gb|ABG51626.1/11-117
IQFIQGIDEEVTPEVRLTRSR-SGNQGTATLIFEDPKA--LGQDVTQ--EITG-MYMIDEEGQITSRDVKARFVNG----
-QPKFLEGLYVMKTKQEWERFMRFMESYAKEHDLGFKK
>gi|86606087|ref|YP_474850.1/4-104
IEFSPGIPE-VPTQVRLLKSK-TGKRGSAIFRFEELKS--------DTQSILG-MRMIDEEGELTTRNIKAKFLNG----
-EFKALEVIYDMETEAEWERFLRFMERFSAANQMGMA-
>gi|33240221|ref|NP_875163.1/10-116
IRFLEGIDETSIPEIRLTRSR-DGRTGQAFFTFEEPQA--LSAVKDG--SIQG-MSMFDEEGELKTREVKARFVNG----
-TPSALEATYVWKSESDFQRFMRFAKRYASSNGMGYSE
>gi|14195103|sp|Q9TLZ2|PSBW_CYA/4-114
IQFIKGIDEQTVPEIRLTRSR-DGNTGTAIFSFINPTVFLLHSSSQNYGEITG-MYLQDDEGELSTRNVTANFVNG----
-KPKAVEAVYLIRNKSGWDRLMRFINKYAEDKNMSFYK
>gi|35211491|dbj|BAC88869.1/4-99
AQFLEGINEE-ITDIRVMASKYDTSRKTALIYIAAPKA--------DLNQVMS-FRMRDEEGEITVRDIRSKHLNG----
-KFIGLEISHEMGSDAAWNRFYRFMER------MGYA-
>gi|67923255|ref|ZP_00516740.1/8-121
IEFFVGISEE-LSNVSLRRSK-QTGIRNVLMIFENLKS--LERFRSYTNQTYGDLRLIDSEGEISVTPSSLKIIWGGDEG
DELKEVRCGFDLEKDEHWDRFMRFMERYAEANGMAYQD
>gi|25019700|gb|AAN71786.1/8-121
IELFDGIAEE-LDNVSLRRDR-QSGTRNVLLRFRALKA--LDRFNSFRSRFSKAIRLTDSEGAIELWPDSSKLVFGGDDG
DELDRVEFVVPIDNEDHWQRFMRFMERYAAANDMTYGD
>gi|16330371|ref|NP_441099.1/8-121
IEFFADLPEE-LSNVSLRRNS-TTGARTVVMTFERLQA--IEKFQSFTQRFNGHLRLADEEGAMEIEPSSVKFIFGGDEG
DELRGAQCSFDLVKNDHWERFIRFMERYAEANGMGYQD
>gi|75909932|ref|YP_324228.1/8-121
IQFFAGIFEE-LSNVSLRREV-RTGKRIVMMKFNQLQA--IEGFNSFTKQSLNSLLLTDEEGEISVTPSATRFIFGGDEG
DELQGVECKFEVERDDHWERFMRFMNRYAEANDMEYGE