HMM Seed Alignment: TIGR03030
Download Alignment>OMNI|NTL01PPA0306_P.profu/2-726
GSPQSFKLFKWLAA-CILILAIANLATIKVTVETHLWLSGSAFLLAVIGMTSNDK-----KLP--HLLILITGAFISIRY
IWWRYSETLP-WESTLDLPFAIALLVTECYGITIYLLGMFVNVRQRSRDITPINVNQA-IPTVDVFIPTYNESIRVVAPT
VSAAMQLQYP-GKVNVWVLDDGGTPQKLNDEDPQQARIAQQRTHKLKDLCQKL------GANYITRPANVHAKAGNINHA
LKHSNGELILILDADHVPTKDFLINTVGMFQQQPKLGFIQTPHFFATPGPIEKNLGIEDKVPSENEMFYNRILSGMDFWN
ASFFCGSAAIIRREALLDVGGISTRTITEDADTALEIHAKGWDSIYLNRAMIAGLSPDTFGAYVTQRSRWAQGMLQIFLL
NNPLLKRGLSFPQKICYLNSTLFWFFPLFRVMYLIAPLCYLVFDLQIFVGNANDFLVFAIPHLAISMVISQHLFGKTRNA
LFSEFYETVLSLYLFFPVLSVLITPKKPKFTVTPKGETTSHVHFS-PLTPVIVGLFVVIAAAEAWGLYRI----YNYPIE
QGQLAVVLVFNTFNLLLCAASLGATLEKVQRRSEPRSHCNITAFVTAEN---QTIEAKIEDASVHGVRI--SINSMKAPF
KHDQVFDLTCYIKKHDSSNNCKPKLKPHSVAMKVRHCQMQATGQ---MLSCEILETNTQTLEIFTNMV-FAHSERWQQRR
QFEARQSKGIITALLGFFQLAISSITTSAKTAHALK
>OMNI|NTL01AA00979_A.aeoli/14-735
IDENLFIKALKYTF-IFGLLTYLSVIVAPSPLEFQFYIAYSTLLAGAFLIVWKRF-----NFGYTHYLTVYLLVFIMLRY
FWWRTFNTIN-TDNVWNFIFSTALYFAEFYSVTIALLGIFFSIRPIDRK--AIKVDMESLPTVDVFIPTYNEPPEIPETT
ALAAINMDYPSDKFNVYILDDGGTKQRLNDPDPERREYFRKRAEELKSFVERLRKLGYKNIHYLTREKNVHAKAGNINEA
LKKTKGDLILILDADHVPSKDFLKETVGFFVKNPKVFLVQTPHTFYNPDPIEKNLGVFGRMPGENEMFYFLIQKGFDLWN
SSFFCGSAALLRRKYLEEVGGIQTTTVTEDAETALELHSRGYESVYYDRPLIFGLNPETLSGMIVQRIRWAQGMIQIFIL
KNPILKKGLKWYQKLAYFNASFFWFFGLARTIFLIAPLAYLLFGLHIYDASLAEVLAYPIPHFLASLLLFYYLFSRVRWP
FISEIYESILGIFIFIPSILTLLNPKNPTFRVTPKGELLDRDYIS-PFYKPYFILYHLILLGYLFGIYRW----IQYPDE
RGTVLITLWWNTFNFFVMTVALYVSYERRQRRKFHRIPSNDQIIIYRDS---ETLLGRVIDISLGGLAV--KLETKPKEE
FKEGEEVKGVIRNVENKLVYIKPKVV------------RYEKDRNILRMKFEWKPEDVETVSKIVDIV-YAPSSRWVILL
E--RERELTPFEGFVVLTKQILRDFGQVYISIYNYF
>OMNI|NTL01ATA1537_A.tumef/1-715
----MNKAITVIVW-LLVSLCVLAIITMPVSLQTHLVATAISLILLATIKSFN-G-----QGAW-RLVALGFGTAIVLRY
VYWRTTSTLPPVNQLENFIPGFLLYLAEMYSVVMLGLSLVIVSMPLPSR-KTRPGSPDYRPTVDVFVPSYNEDAELLANT
LAAAKNMDYPADRFTVWLLDDGGSVQKRNAANIVEAQAAQRRHEELKKLCEDL------DVRYLTRERNVHAKAGNLNNG
LAHSTGELVTVFDADHAPARDFLLETVGYFDEDPRLFLVQTPHFFVNPDPIERNLRTFETMPSENEMFYGIIQRGLDKWN
GAFFCGSAAVLRREALQDSDGFSGVSITEDCETALALHSRGWNSVYVDKPLIAGLQPATFASFIGQRSRWAQGMMQILIF
RQPLFKRGLSFTQRLCYMSSTLFWLFPFPRTIFLFAPLFYLFFDLQIFVASGGEFLAYTAAYMLVNLMMQNYLYGSFRWP
WISELYEYVQTVHLLPAVVSVIFNPGKPTFKVTAKDESIAEARLS-EISRPFFVIFALLLVAMAFAVWRI----YSEPYK
ADVTLVVGGWNLLNLIFAGCALGVVSERGDKSASRRITVKRRCEVQLGG-SDTWVPASIDNVSVHGLLI--NIFDS-ATN
IEKGATAIVKVKPHSEGVPETMPLNV--------VRTVRGEGFV---SIGCTFSPQRAVDHRLIADLI-FANSEQWSEFQ
R-VRRKNPGLIRGTAIFLAIALFQTQRGLYYLVRAR
>OMNI|NTL03RS1957_R.sphae/9-735
SPLRVVPVLLFLLW-VALLVPFGLLAAAPVAPSAQGLIALSAVVLVALLKPFA-D-----KMVP-RFLLLSAASMLVMRY
WFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDR-PFPRPLQPEELPTVDILVPSYNEPADMLSVT
LAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCREL------GVVYSTRERNEHAKAGNMSAA
LERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWG
GAFFCGSAAVLRRRALDEAGGFAGETITEDAETALEIHSRGWKSLYIDRAMIAGLQPETFASFIQQRGRWATGMMQMLLL
KNPLFRRGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGYLAVSFLVQNALFARQRWP
LVSEVYEVAQAPYLARAIVTTLLRPRSARFAVTAKDETLSENYIS-PIYRPLLFTFLLCLSGVLATLVRW----VAFPGD
RSVLLVVGGWAVLNVLLVGFALRAVAEKQQRRAAPRVQMEVPAEAQIPAFGNRSLTATVLDASTSGVRLLVRLPGVGDPH
PALEAGGLIQFQPKFPDAPQLERMVR-----GRIRSARREGGTV---MVGVIFEAGQPIAVRETVAYLIFGESAHWRTMR
E-ATMRPIGLLHGMARILWMAAASLPKTARDFMDEP
>RF|ZP_01145373.1_A.crypt/4-724
HLPALTNGLTFIVA-AAVGFVLIAATLLPTTGPLPDIEQGVVFGLLLILYNLDGGCRSRRKRPIVRISISALTILLTCRY
LDWRLTDTLPFGFGTINIALGILLVLAELHGIGSAIMGQIINVLPLDRTPQHFTLDPASCPTVDILIPTYNEDPEIVETT
VIAATQIDYPASRFRVYILDDGGTDAKRAKPGAAGREAAR-RAETLREIARKF------GAIYLTRPENVHAKAGNINHA
LGQIDGELILVLDCDHVPTRDFLSRTVGFFQADPKLFLLQTPHNFVTPDPIERNLSTFEVMPAENELFYHVMQPGLDFWG
AAFFCGSAAVLRRHVLDEIGGISGKSITEDAETTVKAMCRGYRTAFYNRPMVSGLQPETFSGFILQRVRWAQGMMQIFML
DNVWLKSGLTFMQRLLFTNFAFYWLFPISRSILLLMPPLFLFFGFNVAATTPRQLLVYALPYYLAALVNSQYFYGRVRWP
FISQVYETAQTVFLSAALVSVLRRPRAPKFKVTPKGEMLDKDFIS-GLSWPFYWLFALACASLGIGLWRI----VTQPQL
RWALIFVVFWVVLDMIALLGVIGALAERRQTRTMPRIGCKGPAWMHRDG-GG-WVEAALHDLGRGGAGL---VLAAGTEG
PQPGDRVRLHVPGLRGGLPAVVRHRK------------DGARNS---IIGLQYVSDGVAEARAAVDRA-FGDSELLVRNA
A-LRHRGTSIAYAFGFLFAIGLRGTARHFRILARDA
>SP|P58931_P.fluor/29-720
WPSAPRTVLVVASC-VLGAMLLLGIISAPLDLYSQCLFAAVCFLAVLVLRKIP-G-----RLA--ILALVVLSLVASLRY
MFWRLTSTLG-FETWVDMFFGYGLVAAEFYALIVLIFGYVQTAWPLRRTPVWLKTEPEEWPTVDVFIPTYNEALSIVKLT
IFAAQAMDWPKDKLRVHVLDDG-------------------RRDDFREFCRKV------GVNYIRRDNNFHAKAGNLNEA
LKVTDGEYIALFDADHVPTRSFLQVSLGWFLKDPKLAMLQTPHFFFSPDPFEKNLDTFRAVPNEGELFYGLVQDGNDLWN
ATFFCGSCAVIRREPLLEIGGVAVETVTEDAHTALKLNRLGYNTAYLAIPQAAGLATESLSRHINQRIRWARGMAQIFRT
DNPLLGKGLKWGQRICYANAMQHFFYGLPRLVFLTAPLAYLIFGAEIFHASALMIVAYVLPHLVHSSLTNSRIQGRFRHS
FWNEVYETVLAWYILPPVLVALVNPKAGGFNVTDKGGIIDKQFFDWKLARPYLVLLAVNLIGLGFGIHQL---IWGDAST
AVTVAINLTWTLYNLIITSAAVAVASEARQVRSEPRVSAKLPVSIICAD-GR-VLDGTTQDFSQNGFGL--ML----SDG
HSITQGERVQLVLSRNGQDSLKDARV------------VFSKGA---QIGAQFEALSLRQQSELVRLT-FSRADTWAASW
G--AGQPDTPLAALREVGSIGIGGLFTLGRATLHEL
>SP|P37653_E.coli/143-834
LSAGARRLILGIIV-TFSLILALICVTQPFNPLAQFIFLMLLWGVALIVRRMP-G-----RFS--ALMLIVLSLTVSCRY
IWWRYTSTLN-WDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPVPLPKDMSLWPSVDIFVPTYNEDLNVVKNT
IYASLGIDWPKDKLNIWILDDG-------------------GREEFRQFAQNV------GVKYIARTTHEHAKAGNINNA
LKYAKGEFVSIFDCDHVPTRSFLQMTMGWFLKEKQLAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWD
ATFFCGSCAVIRRKPLDEIGGIAVETVTEDAHTSLRLHRRGYTSAYMRIPQAAGLATESLSAHIGQRIRWARGMVQIFRL
DNPLTGKGLKFAQRLCYVNAMFHFLSGIPRLIFLTAPLAFLLLHAYIIYAPALMIALFVLPHMIHASLTNSKIQGKYRHS
FWSEIYETVLAWYIAPPTLVALINPHKGKFNVTAKGGLVEEEYVDWVISRPYIFLVLLNLVGVAVGIWRY---FYGPPTE
MLTVVVSMVWVFYNLIVLGGAVAVSVESKQVRRSHRVEMTMPAAIARED-GH-LFSCTVQDFSDGGLGI--KI----NGQ
AQILEGQKVNLLLKRGQQEYVFPTQV------------ARVMGN---EVGLKLMPLTTQQHIDFVQCT-FARADTWAL-W
Q-DSYPEDKPLESLLDILKLGFRGYRHLAEFAPSSV
>RF|ZP_00418769.1_A.vinel/2-698
PPPSRKAGLSAFILILAASPALLLFVTVPLDISTQVGMGVCMILLMLLLGRLQ-S-----YTV--TLILIVVSVAVSTRY
LYWRTTQTLV-FDNSLEAFLGTGLYLAEVYVWMILTLGYFQTVMPLKRAIRPLPEDLSQWPTVDVYIPTYNESLDVVQDT
VLAAQNIDYPADKLRVYLLDDG-------------------RRPEFGAFAAAA------GVGYITRSDNRHAKAGNLNNA
LSLTDGELICIFDCDHVSTRAFLQATVGAFLQDARLALVQTPHHFHSPDPFERNLATGREVPNEGELFYGPVQQGNDFWN
AAFFCGSCAVIRRSALEEIGGFAVETVTEDSHTALKLQRRGWNTAFLPVPLAADLATERLALHIGQRMRWARGMTQIFRL
DNPLLGRGLRLPQRLCYLNALLHYQFALPRIVFLTAPTAYLLLGQNIIAAPATLIFAYMLPHMAHSIMANARIQGRHRHS
FWGELYETVLAFHILKPTLVTLFFPKRGKFNVTDKGELLDRGFFDFALVRPHLLTAALLATAIAVGLIRYFYIDW-FPID
AKVLAMSIGWALFSLLLLLAASAVAMESRQLRSTTRLTLKLPVVLHFDN-GR-SWQGETLDISMGGLKV---VPAQTVKK
MPQPPGQLEYIEIACNGHTALFPAHL------------MGAGRR---ELRLSFSPLDIDQRRELVRIV-MGRADAWLA--
S-TPKRLDRPLRSLWSVAKNALTLLNPARRRKEPAP
>SP|P21877_G.xylin/19-711
GKILSIRGAGLTIG-VFGLCALIAATSVTLPPEQQLIVAFVCVVIFFIVGHKP-S-----RRS--QIFLEVLSGLVSLRY
LTWRLTETLS-FDTWLQGLLGTMLLVAELYALMMLFLSYFQTIAPLHRAPLPLPPNPDEWPTVDIFVPTYNEELSIVRLT
VLGSLGIDWPPEKVRVHILDDG-------------------RRPEFAAFAAEC------GANYIARPTNEHAKAGNLNYA
IGHTDGDYILIFDCDHVPTRAFLQLTMGWMVEDPKIALMQTPHHFYSPDPFQRNLSAGYRTPPEGNLFYGVVQDGNDFWD
ATFFCGSCAILRRTAIEQIGGFATQTVTEDAHTALKMQRLGWSTAYLRIPLAGGLATERLILHIGQRVRWARGMLQIFRI
DNPLFGRGLSWGQRLCYLSAMTSFLFAVPRVIFLSSPLAFLFFGQNIIAASPLALLAYAIPHMFHAVGTASKINKGWRYS
FWSEVYETTMALFLVRVTIVTLLSPSRGKFNVTDKGGLLEKGYFDLGAVYPNIILGLIMFGGLARGVYEL-SFGHLDQIA
ERAYLLNSAWAMLSLIIILAAIAVGRETQQKRNSHRIPATIPVEVANAD-GSIIVTGVTEDLSMGGAAV--KM----SWP
AKLSGPTPVYIRTVLDGEELILPARI------------IRAGNG---RGIFIWTIDNLQQEFSVIRLV-FGRADAWVD-W
G--NYKADRPLLSLMDMV-LSVKGLFRSSGDIVHRS