HMM Seed Alignment: TIGR03022
Download Alignment>NTL01ST2022_S.typhi/17-476
LAISDLIFFNLALWFSLGCVYFIFDQVQRFIPQDQLDTRVI---THFILSVVCVGWFWIRLR-HYTYRK--PF--WYELK
EIFRTIVIFAIFDLALIAFTKW--QFSRYVWVFCWTFALILVPFFRALTKHLLNKLGIWKKKTIILGSGQNARGAYSALQ
SEEMMGFDVIAFFD-----TDASDAEINMLPVIKD-TEIIWDLNRTGDVHYILAYEYTELEKTHFWLRELSKHHCRSVTV
VPSFRGLPLYNTDMSFIFSHEVMLLRIQNNLAKRSSRFLKRTFDIVCSIMILIIASPLMIYLWYKVTRDG-GPAIYGHQR
VGRHGKLFPCYKFRSMVMNSQEVLKELLANDPIARAEWEKDFKLKNDPR-ITAVGRFIRKTSLDELPQLFNVLKGDMSLV
GPRPIVSDELERYCDDVDYYLMAKPGMTGLWQVSGRNDVDYDTRVYFDSWYVKNWTLWNDIAILFKTAKVVLRRDGAY
>NTL03AA2039_A.actin/16-472
LIFTDMISYVFAIAVGYWLSPLDDFSRDILE----LKGSIYRAGSFFLAMLASIGILWVFYR-HYTYRK--PF--WDELK
DTYFSLFVIAFVNLALLVFAKV--PDPMETWIYVYGVLFLCFPLFRIICKKVLKFNCLWDMPSVIIGTGRNAFRAYKAIQ
AESNLGYKVQTFVS-----QQESCVLAKHLDFI---SEQEFLKHLHRYEKVFIALEHDQADLLAYWVKKLSALNFRNVSI
IPSLQGIPLYGAEISHFFSSETIVLRIPNKLAKRSTRLMKRTFDIVVSSLLLILLAPLFLVLFLMIRKDG-GKAVYSQVR
VGRNRKVFKCYKLRTMVVNSQQVLRELLAKDEEAREQWNKEFKLKNDPR-ITPIGKILRKTSLDELPQLWNVFKGEMSLV
GPRPVTRQELKYYGDDLIYYEMVRPGLSGLWQVSGRNDIGYATRVYLDAWYVKNWSLWNDIVILAKTVNIVLRRKGAY
>AFE_2951_A.ferro/21-488
LVLGDVLALLAAFYLGRLSHAFYYHLSPGWV-LLYWWGSLAQVNVLLFLLLMALGITAFAVKGHYARRK--AF--WDEAG
EVLGVFTLLLALNATIAFSGKW--PLSRLWLFSTWVLALVLLPLARWLVHHILQRLGVWMRPVVVVGCGRNAAEAIRALD
SEPMLGYAVQRVLT-PGGCDPASGELPTQAPMEALGDDPLATLARLGKPHVVLALDMDQWDAQEKLVRSLGLSYP-NLTV
VPPLRGLPLFGMEAMHFFGHEVLMLRVRDNLARPGPRIAKRLFDLLAASLLVVLLSPLLLYVAWRIRREDGGPVFFIQER
VGRGGGTFGCLKFRSMVMDAEDRLKQYLHSHPELAAEYERNFKLRNDPR-VTRIGKFLRRGSLDELPQLFNVLRGDMSLV
GPRPLLARELDRYGDNICLYHMVYPGITGLWQVSGRSETTFDERAYLDAWYIKNWTLWYDIVILLLTVKVVLRREGAY
>NTL02TD1700_T.denit/10-438
LILIDIIVLIALFYLTLYVRTSLSDSSLPLF-------KTLQIQDFSFVIFVIFALLF--YEKIYTLRY--DF--WQETR
KIMKSLFYGYLIIMALLTLSKVSQEYSRLFISLYFMFALFILPVVKRLSKKVFYKIDFFIKKVYIVGEESQIEIFKKEFR
ENWYLGLR----------------------------------YSDSKYDTVIIASKGTDAKTMKRRVAKYLQNHT-EVYI
VPYVSSVNFANSNIMEYFNIRNSTIQVENKLLLQHNIWIKSVAEFFMTLLILPLFLTIHVLITILIRADSKGLVFFKQYR
LGKNDNNFICYKYRTMYENSASLLESYLLAHPEEIAHYEEYHKYKNDPR-ITKIGKILRSTSLDELPQIINVLKAEMSLV
GPRPYMTSESDKLGEHKEFVLKVKPGITGLWQVSGRNELTFKERNELDVWYINNWSLWADFVIMMKTIKVVLSKVGAR
>NTL02PS5766_P.sp./68-526
LFIADIAALTFSILAATLSLVLLGLIGLHPG---------------LLLNSICVMTFYVACAAIYGLYPGTGMSPVLELR
QCVLASMAAFAFAIVANLVLATLSVTELAIFLMASALASLIVPLARLTTRRLCSTTSWWGENAIIIGSGPQGRAIYRYYS
RAPQRGLRPLGVVDFAKTASSQDSLELTGIPYLGSVQRLERLRRKTQARWSIVAPGGCQTIDMNEVLSHAG--NFSNVLI
LPSQMQLP--SLWSGSRECAGAMGIHLKDHLHNHPARAIKRFVDICLSGFALTILSPFILAFVLLLKLRDPGPAFYGQTR
VGKDGKLFKAWKFRTMVINADQVLEDYLENDPDMRQEWIEYQKLQNDPRVISGIGSFLRKSSLDELPQLWNVMKGDMSLV
GPRPCMTSQTSLYGSVLPLYQRVRPGITGLWQVSGRNKTTYDQRVRFDSYYVTNWSPWLDIYILIHTIKTIVLREGAY
>DR_A0034_D.radio/33-481
LVLGDFLSAVVALELTSLFLRATGRPVLNWS------------------DSLIWVGFWILWRAYQGLYPGYGRSPQTELR
LHTVGTVQLLGAQLAAAFAVHQL-APSALGLVLQWGLILVLALLIRYGLRSLLIRGGQYGRAISVIGAGQTAALTIAHLR
SNPAYGLNPVVAYD---DNPALHGTLLEGVPIVGTLDDALNV---PRTAQALISIPGARAEVQQRVVNSVYAVYP-FTWV
VPDLFWVP--NQALQPHNIGSIATLEIKNNLKSVQARLIKRALDLMLSVVGLFLIFPILIAIAFLIRWDSKGPAIYKAER
LGRNGKTFPCYKFRSMYQNSEERLVELLAADAARRTEYEKFHKLRDDPR-VTRIGAFLRKTSLDELPQLLNVVLGQMSLI
GPRPYLPREQSKMGNMAREILLVNPGMTGYWQVNERSQSTFERRLDMDRFYIANWTPWLDVLILIQTVRVVLMGKGAY
>NTL01NO1508_N.ocean/48-502
LLAVDVGAVGVAFAAAVALRYSFGSGLNFST----------------YWELSPLLLLFSIFYAGAKLYSGTMFPPPEELR
RLTYATSAVFLTLAVFALLTQTGMRYSRGVFFLAWGLALVAVPLARAAIRALYVSRPWWGRGVLILGAGYTCAHLVRTLQ
ENPQLGLKPIALLD---DDPVKQKRELHGVPVVGACALAPKLARRLRLSYAAVAMPGVSRARLVELLGQHG-WPFRRTLL
IPDLFGFS--SLWVTSRDLGGILGLELREQLLLPIPMLVKRTLDLVLALVGGLFILPLLGLIALAIKLDSRGPVFYRSER
MGRDGHRFVALKFRSMRGDGEALLRELLQRDPEKRKEYEQYHKLTSDPR-VTPVGRLLRAWSLDELPQLWNVLKGDMSLV
GPRAYLERERPDMGEKSNLILKVRPGITGLWQVSGRNERTFGERVDMDVYYARNWSVWLDFWILARTATAVLQGKGAY
>NTL01DS0481_D.desul/24-466
MLASDIFALVCAIGAAVVVRYLFDGQFHISF----------------YLRCAPVVVFFLAAYAMRGLYPGVLMAPHEELK
GLTLGTTLIFFFLITTTFFFKASEEFSRLVMLGGWLGSVILVPFCRIAVRRRFSRRPWWGIPAVIWGAGADADTLAGRFS
KDRRQGISVLGTVQ---PDDAGDDRL-----------QPLREYAAMRPQPMLVCTPESRDLFFSDEVLRIEELFERTLVM
PPKAFD----ALNVQVRDVGGVLFFQMQTKLLDPVRQRLKRTLDLTVIMLALPVLLPVMAVLAAAVRLEGGGPVFYSQPR
IGRWGRHFRIIKFRTMVCNADTVLQQHLAQHPELAEEWAENQKLRCDPR-ITAIGGFLRRTSLDELPQLLNVLRGEMSLV
GPRPIVDAEVPRYGEAFELYKRTLPGISGLWQISGRNDTTYEERVMLDTYYSRNWSVWMDLHVLSRTLWVVIKRSGAY
>DVU_0281_D.vulga/26-479
LFLTDMAVILGTAIGVGLLRHAFDGYLDPTH----------------YLRLLPFLLLFPAASFAMGLYQSVPLPPPCELK
RLSLATCCTYLAIAIFIFFTRGGELYSRLTFALAGLVSLVAVPVARHLVRQRMARHRGWAAPALLFGKPHHVQPLAHILL
SSPSLGLEPVAIVS----AEHSTCHDFGCLPAFDA-ETTRQYAAGHPEAYAIVVMESYDEADRAHLVEHLSRLFCSVILL
RSSTMSTG--NIWLSPIEIGGLPGLMVRQNLLDPRRLTVKRTLDLIATTLALPLILPVMAVIALCIRLETPGPALFTQRR
IGRDGYHFDILKFRTMYNDADTRLAECLEQSPELDAEWRRDHKLRCDPR-VTRVGAFLRKTSLDELPQLWNVLRGDMSLV
GPRPIVDSEVQRYDAAFATYTRVRPGITGLWQVSGRNNLSYPERVQRDMYYISNWSVWFDIWIIARTIPVVLHRDGAY