HMM Seed Alignment: TIGR03007

Download Alignment

>OMNI|NTL01TD0282/6-505
QQVLGYAKAAWQRRWWGIAVAWLVC-IVGWTWVMIIPDRYQASARVYVDTQTLLKPLLSGLAAEPNVEQQIKLMTRQLVS
RPTLEKVARMTDLDVRANSPEQTEAMLNGLASKISIADAGRENLYTISYQDANGELAKKVVQSLLTIFVESSLGKTRQDI
SSSQRFIEEQLQQYQQKLTDAENALKEFKQKNIGMMPGQGGDYYAKLAEASAQLRQAQLDQQEAVNRRNQLKRQLADEEP
ELTAA-----AAAVATDSEIDGRIQALQKQMDQLRLQYTELHPDIQATKRLIEKLEAQKKADLA------QKKADPAGAR
IQ----NPVYQQLTIAIAEADATVASLSARVAEYQRRYGELRNASNMIPQVEQEYTQLMRDYDVYRQNYDALLKRRESVT
MSGEVESKTDTVDFRVIDPPFVPSQPAWPNRPLLLSLVTLGGLGAGIAVSFLLSQLRRTVTDRRVLRELTGLPLLGAVSR
VETEQSRRRRRKGLLTYLAALGSLIAAYGAVMVLQL
>OMNI|NTL01AE2403/6-510
SQIAGHVRGMWRFRWWGLAFAWIAG-ITGGFVIYSMPDRYESTARIYVDTQSVLRPLMSGLAVQPNIDQQIAILSRTLIT
RPNVEKLITMADLDPGARTPAQREALIAELTRGLQIRGAGRNNLFTLAYQDAHPERAQRIVQALVSLFVESGLVGKRQDS
TSARRFIDEQIAGYEQKLGEAENRLKDFRLRNMALLGDGGRDYVSQMAELSAQLRQAELELKEAQNSRDSLKRQLVGEEP
VLLAQPP---NPLSVALPEIDGRIDALKKNLDGLLLRYTDEHPDIVGVRRVIAQLEEQKQKEVEAMR---KVDTGAPWAP
NA----NPVVQQMKISLAEAEARVASLEARVAEFGSRLAQLRSSAELLPKIEAEQTQLNRDYEVHKRNYEALVARRESAN
MSVEMTAQGGVTEFRVIDPPSLPNKPAAPNRALLMPLAGLIGLGAGIALAFLLSQLRPAFDNVRSLREIIGLPVLGAVSL
VADPVLQKRRRRGLLAFGGGVAGFIVVVAGMTAMVQ
>OMNI|NTL01NE1804/6-509
AQLLVYIKGIWKYRWASVATAWTVA-IAGWFFVYQMPDNYQASARIYVDTQSILRPLMAGMTVSPNPDQQITIMSRTLIS
RPNVERIIRMVDLDIKITDDSAREKLVTTLMKDIKLSTTGSDNIFMISYDNKDPRLAKDIVQSLLTIFVEGGLEGKKQDS
ASALRFIDQQIAAYEEKLVAAEAALTAFKQKNIGFLPGQGGDYYSQLVSAAEELEKARLTLLEAEQARDAVKKQITGDEP
VLLFEVGEV-SPQSIVNPEIDSRIQALNTNLDNLMLNFTDQHPDVVATKRLIAQLEERKVEEAK------LAGTVNNRGR
NY----DPMMQQLNIALAESEAQVASMKARVAEYEARFERLKSMSNTVPAVEVEMQQLNRDYNVNKANYEKLLERRASAE
ISGELTSTSGLMSFRIVDPPTVPEAPSGPDRKKFFTLVLIGALAGGIGFAFIISQIRPTFHSQSTLRELTGLPILGTIPM
VWTEQQKLKDKRKIYAFGISLLMLMACYVVLMIYVK
>OMNI|NTL03NM2528/6-510
TQLLVYLKGIWKYRWAAVAAAWVVA-VIGWVIVYKLPDDYQASARIYVDTQNVLKPLLQGMTVSPDTQQQISIMSRTLIS
RPNVERVIRMVDLDIKAKDTKDQERLVKELMDKIKLGTTGRDNLFTISYNNQNPRLAKEIVQSLLTLFVEGGLGNKSQDS
SSAIRFIDEQIKSYEEKLIAGENNLKAFKQKNIGIMPQQGNDYYSQLSQAMDDLNKTKLELREAQQARDAIKRQITGDEP
VLLVDQGESGSASSIVNVELDSRIQALNKNLDALRLNYTELHPDIIAAKRLIAQLEERKIEEAK------LTRNGSDPGK
NY----SPMLQQLNVALADAEADVASMNARVEEYSARYERLKSLSNAVPQVEAELAQLNRDYQVNKANYEKLLERRESAK
ISGDLGSTTDLVSFRVIDPPTVSDRPVGPDRGKFFSIIFLGSLLAGIGIAFVISQVRPTFHSQTSLREISGKPILGSIPM
IWTDKEKVKRRKRLYAFGLSLLSLLGLYGILMLKIA
>OMNI|NTL01NO1984/6-519
LQLYSYWCGIWRYRWYGVLMAWVVV-IVGWTYVIQMPDRYESSARVYVDTDSLLRPLLKGLAIQPNVDQRLRIMTQTLLS
RPNLGKVLRQTDMDLSVTTPEQEIKLLNQLEKNIHIKGARRDNLYTIAYENTDPQLAQRVVQAILNIFVESTMGASRKDS
NTAQQFIGQQIKEYEKLLRTAEQRLMDFKREHVGMMPNEKGDYYQRLQTAVENLRTARTELNMAIGRRDVLKRQLRGEEP
VFGFGTGGT-GTSSKDSSPAGMRIQSLQAELDEVLLKYTDKHPKVSAIKETIAMLQKREEQQFSLPQKQQGEGEEANEAG
EYAVGGNFYYQQMQISLAEAEANIASQEAEVSALEKDVERLHELVDTIPKVEAELAQLNRDYGVYKSNYQQLLTRLESAK
MGERVEESPDNVKFKIVEPPIQPLLPSGPDRPLLLTLVLVVAGGAGGALAFFLSQLRPVFYTRRDLEEATGLPVLGPVSM
ILSGRILWKHRLNLAFLLTFLGLLIAGYGLLVSNYL
>OMNI|CPS_5026/6-515
EEIIDYLKGIWLKRRYIIIATWLIC-PIGWYFVAAMPNVYQSEARVYVDTQSLLRPLLKGLTVETNPDTQIRLMVKTLLS
RPNLERISRMTDLDVQASTPAQYEAIIKNLKDNIKISSARRENIYTLSIEDEDPEMAKNIVRSALTVFIENTLGETRSDS
DSAQKFLNTQIKDYENRLSNSEARLTSFKQKYSGILPDQSGGYYAKLNGNREKLKAIELDLLENKTRLDSAKKQLA-QSV
VADTGSDNKIKSENSIQTTYDDRINELEVLLDNLKLRYTEKHPDVIETSRNLEHLNKLRSSEIEKYLAQNNENTGSLKRL
SA----NPVIQEVQIHVNQLENLIASLNVRADNYRQRIIELENRVHTLPEIEAELIALNRGYGITKEKYEELLSRKETAQ
LAQQADETTDKIQFRVIDPPRKATKPSGPKRFLLFGVVTLIGFAVGIGLSLLMSQLNPVATSTAQLSKITGVPIFGVISA
NENLGLQQWHKKKTFIFIGSNVLLLCLLVLFVSYFL
>OMNI|NTL02RR3117/6-496
EALLSHVPAMWRRRWIVMVVAWVAC-LVGWGAVALIPNVYSTATTVYVETESLLRPLLQGMTIDVGTD-KLRIMNQTLTS
RPNLEKVVRVVGL--GGSSPADFNAAVTKVQKDISVRMSERNNTFTISYGARDPEVAFRVVDTLLTIFVESNLGFARQEL
DVAREFIGKQVKEYEERVAEAERKLADFKRENTEFLPGAST-YREYLDGLRRETAAIAAEIADTKAKVASMTTQLGDLKP
MVPSG-------GAAAMSPLQMRVEQMRASLDDLKLRYTEKHPAMEETRRQLAILEDRLRSE--------GGSSAGGMGA
IP----NPVYENVRMEKVALTAQIAALENRFTRKTEEVAQLEAKAPRVPEVEAEFTRLTRDAELVRRQFEELQARQEAAK
LSQSREMEAEKVQFRVINPPQKAQHPSGIKRSLLITAVLFGGLGLGLALTFLISAMQSTFYSPYRIIHALGVPVIGTISF
I-APRRTLGSKLALGSFSASALLLVVAWMALMLVEY
>OMNI|DVU_A0039/19-479
LDVRRYLVLLRESIVTFCAIAVGVT-LLGVAVSYVLPKRYEAHSSVSVE-QNVVNELVKGIAITPSLEAKLRILKVSILS
RKMLLAVIRDLDMDLG-RQGEQLEILIENTRKNVEISYEEKKGLFYIRYRDASPERARDFVNALTRRYIEESTASKREES
YEATRFLSDQIEVFQKRIEAAQKAIDAFKSEKGMILSMNESILREEIKETEHRLEETRIRKNERLAQLGILEKGTGG---
---------------------GRLAEKEAAYKALLGTYTAQHPDVVRAKAELDALRAS------------GGGGGGRKGG
VD--------------YQRIKVELESLNEIERIQQELIEKDKRLLQELPAVQTELQALQQARKNETLIYEQLVTRYGQSE
VSKQMELQDKAVSLRIIDPAILPIRPSTPNRPLIMLAGLLLGGAIGAGWVILSDQLFRKLRSVEDLTAM-GVVVLGALPR
IASPDDARIGRHRQVALAMSVTVALFVVG-LAAAEY
>OMNI|NTL01DS0831/14-481
LDILRYIRLLWEHALAFWLMAAVVM-LAALGFAYSLPKIYQAKSTVAIE-QNVINDLVRGIAITPSMGAKIRILNVSLLS
RSSLLSVMKELDMDLGLSGPA-LEERITSVRRKVSVGLDEKRGLFFISYESSNPVLARDFVNTLTRHYIEQSTSDKREES
FEATRFLADQIEVFRKRIEAVQAEIDSFKASRGQILNMSEPALRREIQMAQEELQALRIRKTDLLAQRGVMLR-------
----------------NTPLRNRLETLEAQLAAMLVSYTEKHPAVIRTKQEIEGLRREV-----------ARKGEEERKI
IY----GT------SEYQRIKVELTAVEQQEAQLVSKIADNERLLREIPSVATELADLENRKRKESLIYEQLVGRYGQSE
VSKQMELQDKAVSFRIIDPAVLPSVPVSPKRWLILLAGMAAGLGGAFGVLFLFDLLNPRVRSVEDLRRL-GFHVMAVVPS
ISDVAEERRIFRRRAAVTACGVLLCGGVVAVAAAEF
>OMNI|GSU1984/6-473
FDYRHYLTLIVARKRLFVVVALAVM-AAAVVYSYVLPKKYEARSTVFIE-KNVISELVKGIAVTPSMEQAIKGLSEAITS
RTLVTKVINDLDLDVTTKSNAEIEARVRAIQQNITIKLKG-DNIFTISYVDKDPRVARDFVNTLVRRYVEENISSKREES
YGAIKFLSEQIDTFRGKLEEAEGELNRYKTEKGGVIAIDEAKLFEEINVAQQKLYDIQLRRRHLEGLRPVTRK-------
---------------AGDPLQVKLVALQKQLEELRVSYTDSYPEVLRVRGEIETLKEQ------------MKNRSPQQET
VV----DP------QEYEKAEAELQALKVSEDGLKRYIATNQALLRNIPSAKAGLEKLELEKKNRKDLYDQLMARHGQSE
VSKQMEVQDKTTTFRIVDPAVTPSSPISPNRVKIMLMGIVAGLGCALGLIVLLDRLNNSVHSVDALKET-RIPVLAVIPK
IRTIEAVARERSENIRVFAAAGACFMVILAFLVMEL
>OMNI|NTL01GM2029/6-497
EELNKYLKMLMKRRYLFIVVSLVVMSVIAWG-SFFLPKKYEASSTVFIE-KSVIKDLVKGITFTPSVEDKVRILRYAMLS
RTFVTNVLKSLDADTKVKNDKEMEGLVEDFQKRTQISIKG-NDLFIVSIRDKDPKLATDYVNTLVRKYVEENVSSKRQDS
FGADRFISEQLKTFKDKLDESENKIVAFRQKRGVSVGIDEALLVNDIRQYQGELDSMRIKRNELTATRDALRRQLKSIKP
TTVAL----------SSRENSSEVEMLERRLKQLSANYTDNYPEVIRIKSIIASLKKKQEPGHQ------ADTGAKEEFS
TA----NPVYQNLEQQLYQVEAELEAVNAKQRQLHATIGGKEHELRNVPADQKTLTDLIKERDANRQLYEQLLTRQGQAQ
LTKEMEVEDKATTFRVVDPAIVPMKPVSPDRVKMIIMGIIMGFVAGAASVFVMEMFDSSVKDVTSLKKL-GFEVLAVIPT
IFNQEEASKVAKKDRKIYLVAGCYFALICLMLTHEL
>OMNI|NTL01HC2581/7-500
QLPKEAFREIRSRKWLSFFVFLAVS-FGTLVVGAFWPQQFTSRGVIYVDDQNIIRPLMEGSALTTKVKDHVASVEEVMLS
RRVLTRLAEMEEIWGTVKSEAAKEGIISKIRNNVAVKKTGAPNFIEIEYKDSTAQRVFDVTRELSQLFIDETESSKREES
RNAYEFVDKQVKAYQTQLQASEERLKNFLQENVDGTADTVG---SRISSLERQLEEAELGIKEAIAQRDALQSQLSGQSK
IVRRE---------VAGDAYETRIEELNKKLDSLRLIYLDSYPDIIALKQQIAELERQRTEALSS-----GSASGSRSES
SF----NPIYQELQSELSKALANIDTLRTRQASLTALLERERTRMQRIQENEAKISELTRDYEVNKSIYDDLLKRREKAR
VSMRLDVEGHGLSYKIHEAPAYPLKPSGFTFRHFAVAGLFLGMLAPFGLAIAFCQVDPRVRTGSILQENTGIPVLATIPY
ISTPLERRIDRRRTKVILFLAVLSIGVYLLYGWMRY