HMM Seed Alignment: TIGR02760

Download Alignment

>GB|CAH17216.1|53755714/1-1955
-MTLNKI-SAAKDALHYYTNQD---------------------NYYLSDRDSLNSLSRWIGRGAQKLQLSGE-IEPSQFL
QLLDGQLPSGQLLGIIDKGVRQHRPGTDVTLSAPKSVSILALVGQDERLLQAHQEAVNITFGRIEQLAAEARITFN-GET
TFEKTRNLVAAMFVHTTSRELDPDLHTHVPILNMTERSDGLWRSLSSRAKNDKEHLDHGFRELIYSNQHYLGLVYMSSLA
KKVKELGYDIRIKDRYGNFEIVGISDEAITATSKRRVQILDDMKERGTSSAKAAEKSNLSTRNPKTEIDSQALHQQWVDE
IKDLGIDLGTIIQDSKLNSG------RGAVKSTHTTPLST--DAQKAVG---DALAHLSEYSTQIQHGALVRQAMI-FSA
GLVGHE--DIEREIESLLAARALQG---KP--LEYYTTAHLLAREKDFIAKT---TNELKV--------SF---------
-SISVPNHGLTSTVFKNNERIQIIDIEGF-RCEKELIQDMVHLAEAHQLNSYVLHPGSLKTQQLRADIKHLDTGFISRIK
NLFKDDIVHTVSGFQYHYGKHIKSSPFLRKKQDLVIVHDAQKLSFDDLSALSDITQAHRSKLILLNNSAGTLGFSAGNPI
KLLKEQGIHSYKSL-TAPIKGAL-----------KLSIGKQAN-------------ESMSSAWLQLTPEQQQKSALVALN
NKQKETLTSQIREGLVQKGQLSRQMKKVAVLTTVSLTQTEKGYAHSYKVGDKITF---YNE--GRIPKH-Y----KVCEV
GV--NGLH-LENAQGKTSLFAYDAK-----------EDFHVSREKILEVAVGERLINEQSLYHQRVKYAPKSSFVVSKIT
EEGIYVRHE-SN----TLFLTNKALSEYHFDYDYCKKPHEIKPDTTQVFMAARPYQLNRNLIGEIGE-NAQQVLLFTDDE
QKAQRFLESVQLKWTAYD---VQQKKPDLVYRDMAYANKALEREINSLIHHLSLKSEDKEGIAATALTYALAKCTERNAA
FKHSDLMTHALMHALGEADF----EDIAPLLKGRMAD----SLVYLD-TYWTTKEALHLEEAILKVNYKEQNTVQPIEPS
AQ--KLLSLPETLTQGQKDAITLVVSTSDRFVSIQGLAGVGKTTMM--------RHVKDIAESNQFQVLGLAPTHKAVEE
LNANGIQAQTI------DSFL------RNNGG--LGANHLVIVDESSMIDNEKYHALQQKCIDSQSRMVFTGDITQLQS-
--LASGIPHELTIKSQSQKTA-F-----MTEIVRQNPNPELKKAAEFASRREIGKAFELIKNINP--------EEYVQRK
TPVQG----LNHSSLIEINCTDEEGKKD----YTSIYRAIVDDFLSRTHECQKNTLIVAHAHEDRTPIEVLIREGLHKQH
QLHG-QDILCKRLFPVSMDQADQVQAHSFE--PGDVIRFGKNYSVAKKDDYFTVKSIDREANKLFCVD-ESQVAFTISAS
ILPKTMPSFYKLHERPLASGDRIRLKRNDDARGIIANEEYTVTQV-FGETVGLSNSKNQVTLNLKKQL-DLHWDYSYTNT
AYSSQGATSKFMIALE--LEDRLVVTTHRSHEIDATRASHQSTFYTDNFEGLVKRLEDPLKQRDADKTSAVFTEEDYRFK
QQKQQRISTQLMNRAQEHILEEPKEQVKDSPLIKKYESAQKPSINAEELYNGLLNVSDSLVKSLLGEPNYRLSTQSEYRY
G-AKGSLKIDLDS---GLWHHFETGESGNLFHLIEREKGLSGFKETLEHAAQYI----HYIPEYERKAPQKLNEKKEREV
KEGKRQ---LAQKLFQQSQPIQGTIAEKYLIIHRGLAHYDHADLRFCRSVYT--------KTQDEQKHVPALLAFSKDEQ
GNIHHVQITKLEPHSANKDKSCESVKQTFGSISNYFVNLNHHGKGDIAYFTEGVETGLSILQANE-HARVYAVLGK----
----------------ANFSNIDPKDIPKQVVICLDNDGKDTYKYAKNEQSNTIIKVAQRLHDSGILVSIMIPK----KE
NTDLNDVLIKEGKDELKKQLNR----CMSLEEFKKQC---ALENKESELKKINQDKQIQSLIKQDRKFNAQSDNEFIRLN
QGLINGNKERVYNKEFVENTRTFNKSRSNREMEREL
>GB|AAO07605.1|27358656/1-1928
MMSISPL-RSPSNAAQYYLNEENTQDLPDTSLEKDASD-----NYYLKEKQQGEN-TFWHGKLAQEAGLLGKPVEQKTLE
TILSGTLNDETIKGKRED----HKSGFDLTFSAPKNASILALVGGDSRLIEAHNNAVKFALSELEKDVAQATHTNEAGER
EFHNTQSMIFAVVRHKTSRNNDPQVHSHALAANMTRDQEGNLRTLASNLKQKGGVIN-GSGERIYNFQKYYTALYQSQFA
RESEELGFQTKGLGN-AQFDIDGVPESLHKAFSTRKQQIDQQVMEFGHDTQASRDTAALDTRQRKTYHSDSTLNHKWQQT
VKGEGFDPALLVKQSQ-------------AMPQKGGHAMQ--QAHEAFS---HAMTHLGQYSTSLSLEKVIEVAASDFTK
GTQQANAIDLKQVADEWIKNGQLVP---LAE-KGHYTSQTMLKNEKALMDITKGRTHNMRTNIDEPTLNRL---------
-NIAQDNRQKVADLYGSTKQFHVVNVFG---SSEQIAQNLLNAGNHSGKRVQLVSQNTQHHRHNQQNIPRESHTFVTWVK
HLFQDDQRHTLQGLL-D-----SKHPL--TNKDIILVDNANKMSANELLSLSEKAGNSNSKVILLNRVSNRQGMKAHSAI
DLYSKGNVTTHTWVNSKQADSVV-----------RLHNRED---------------HNIALTYADLP--DKTNAQVLATS
GVEQRRLTNEIRAALKNDGQLSRTSVTVFTQQPHYLSKPQQQFAKHYQSGMTLRQ---WDK--GK-PHD-F----VIASV
DKASNTLEVLSKTDGKASTFDPSSK-------AFQSMNMQLYKPDALEISQGERILATNKHFPSQLE--AGHHYLVTSIT
KNSLTLTNQQGQ----SSTLPLDKLKDAPLTYDYAHSANHFEPR-EHTLLSGKAFTLSKALLNDLTE-SSARLDIFTDHP
EKAQQALEKAEVRPSAIERVLHTQHINDRYLSEATES--TLRHDIEHAIGVLAKEQHA--PVSQKAVDFALNHLSEKEAG
FTQKELVIEAVRFAFEETNSPITKAHIEAELAERSDT---LSAEYSDGTRWTTEAAIETEKHILSNIEQGKGQHSPFATS
KQVHSYLEAQSCLTHGQKNSIHLISTTKDSFVAIQGLAGTGKSTMLET----NIELIAQAGKNQPDQIIGLAPTHSAVGE
LESKGVKAQTL------ESLLTDIRQGRASPE--DYKNTLFFLDESSMVSNKQAKELTDLVLQSQSKAVLLGDKEQLLS-
--LNAGKPFELAMTKGIIDTAQIIESEQMTDIIRQRNKATLGAVHNILDKQP-DSALDKLSQQGA---------------
-DKQG----KTQHVISTLTDNPQDPRKAQQIATEKLPYEVAQDYLSRTQETRENTLIIAYTNNERDAITEHIRHGLIKKN
ELGK-ENVIVPRLRSIGASGEELKTMMPYQ--KGLVLS-------TKPGQYGTITKVDSEHGVVVVKSHETGKESAFLPR
HRDHKFTALFSVSHKPLSTGDKIITRFTDKTRGIKANVVHHIVQADNNAVIAQSKNGQSLTIDPEKIK-DGHWDYAYTRT
ADMAQGATYQNVITS---IKGKGALTNLRRAYIDLTRASEHVRLYTDNPKQMMK----SWLSKEVNKASAIETVKHIAPQ
S------TTYFNGNALPH--EDVRYQNKNGDF--DYDKFR------EHINSELPKYTESLAIHLLGAPNKSKSDRDYLTF
GTGKSAIKVSLTGDYRGYFKDYTTGEKGSLINLMMSHKDLS-YKEAMNEAHHLLNNPEHYQVAINKDHDKLMNTTPKHIA
QFEQR-----SKDYLQESQELKGTLAEQYL-HKLGVKNAENDNVRFHPAVYS----------SEDKAFHPAMIANIHNQK
GETRAIEITYLD-HDANKDSDMDVNPRVLGTKSKQMTLFNQGQDLNTTIISTGIEQSFIINEHTHGQYDIINVNHK----
----------------NDIQNITPDEIRQNVIIVLTNQNLDI-------NSNNMEKIIKKFSSPNINFV-----------
-----------TEEDMLKQITE----CIHKFEGQDKDINLNIAIDDSVLKQPNSD--HKDVISSIHNERESKELEHFDHK
EHSPQQDI--DLNKAQDVDKH----LDLDRELER--
>GB|CAG17960.1|46911611/1-1980
MLSISPLSQSAGDAASYYLTEEKHHDLPDVSLEVDTQSPEKETNYYLKEHSDEPN-TQWFGKIAEQEGMLGKPVEEKQLE
AVLSGTLNGTTVHGKREN----HRNGFDFTFSAPKSVSTLALVGGDKRLITAHDDAVKFTLSHMEKDAAQAKYTDEQGKT
AFANTGNLLFAMVRHKTSREDEPQMHTHALTSNMTKDSEDTLRALASCFKQQGGVIN-GTNERIYNHQLYYGMLYQSYLS
KQVESLGYGIHSVGK-GQFEIEGVPEGYLQSQSTRSQQIDEHARSVGMDSAAARDMAAKGTRKGKSYASDATLMEKWQGD
AKASGFDIQAFVASSY-------------ARANSEAPSQS--LKPAAMDAAHRAINHQSQTRNQLGYEKLIESAATQFTQ
GEK-LDVIDIKLAVDTLILQGHLIG---LNDSQSLFTTQTMIDNEQKLIASTQGQKRHLRTLVNTQSLEQQ---------
-GLSADNQDKINTLFASRKQTNIVNVFG---QSQQIASALLHVGTESGQRIHIITPDTLSKQTTGAKVPREAFTATQWVK
NLFRPEHTHTVQRLLHD-----KDTPY--SNRDLFVVEAANKLGVNEVQGLIDKAKVSNSKLIFLNHTHARQGMKAGRVM
DTLKKGNVTEHSWVDTKDNSAQL-----------FVHEKNDGE-----------RIDAIARAYSDLT--DTSQVQVLGTT
QKDVQALNTTIRHTLQQRGDINRHGVTVRTLNPVFLSDAQREVVSHYKKGMVLSE---WQKVHGRNTKQDF----TVTAI
NRKNNLLT-LKDSKGKTQDINPNTR-------EAKARQFSISRSDSIEIARGDKLRVNGNHFASKLT--QHQTLTVSSSN
ALFINLKDNDGK----YHLLATNQLNDAPLSYNFAQPLSKADDTKAHTLIGMKSYAASKELLHDLNHGQASRLDVFTDSG
EKLDKHLEKSTIQPSAIHRVMQAHGDPEKFINSQTFD--VLRQDVNATLHTLKDKALD-KGLIESAVQYAIGTVSEKEAG
FSQKQLVIEAIKYAFEEKGQAIKETEIVAHLKQAENNQQLLSAEYHDGTRWTTHAAIATETRILERLAAGKNTVTPLATP
AQANAFLDKHPRFTDGQKSAVHLITTTADRFVAVQGLAGVGKSTMLES-GIDLVKGI-QAMNPEQTTFIGLAPTHAAVNE
LKAKGVQSQTA------QSLLTDFLSEKHTPG--QFRNTVFLLDESSMTSNQQIDQFTELVNITGARAVKLGDIYQLTS-
--QEAGKPFELAITNNIIDSV-T-----MKDMKRQQNDTLLGAVHNIVDRQG-ESALEKLKQQAPLQDYQPLPATKNEQQ
ADDQEQASINQSHNVISTYHNTGNPKKDQETATLALATTVALEYLSRTPQSRENTLIIAYTNQERDDISHIIRQGLQQQK
HLSA-QQYNVPRLRSVGATNIEMATMMPYK--SGLILR-------TGKDNYAAITDVDRQHGVVTVADMKTGEERPFFPK
NHDHTFTQLWSQSEQPLAKEDSIMLRQTDKSRQWQGNKVYRVTDINNGKIQLESKDRHTLSLSTTQMK-DAHWDYAYTRT
ADMAQGSTYENVITT---IKGKGILTNIRRAYIDITRASHHVKLITDNTEKTML----SWVNNETNKPSALETRDKYYPE
H------KALFNDRPIPK--DNPVYQDINGRL--DIKTMG------KVINQQLPAYTESLATQLLGQPDTTKSGRDTLTF
QQPKGELKITLTGQYRGHFKNWGTGENGTLISLIMNKEGLS-YKAALFKADTLLSEPDKHQLTINPQHEQLKATVPLKQS
QLEAR-----AQQYFNDGMPVTNTLAQTYLDTNPNRPFKDNDSIRYHPRVYS----------SETRSTHPALIAKLETPD
NQIKGISVTYLN-DATGDISDLKINKRVLGTKSGNHIPINEGIQADYSILAVGIENALLINDNNPTNTDIIAVTNN----
----------------NDCRTVNTDNLRENIIIVLNQENTEI-------SQRLIDDITSKLERDGKHATIIEPN------
--DINNT----PGSTLSDHIKT----AINDITIKDNYIPDAIT---TLTNDINNA--ITPYINTPLTETEKSTVRDIAIN
EHIEKQTNMILLEKETTLDTRT-TQLEIDRELTR--
>GB|AAL23509.1|16445291/1-1752
MMSIAQV-RSAGSAAGYYSDRD---------------------NYYVLGSME----ERWAGKGAEQLGLQGT-VDKEVFT
RVLEGRLPDGADLSRQQDGGNKHRPGYDLTFSAPKSVSLMAMLAGDKRLTEAHNQAVDIAVRQVEA-LASTRVMTD-GQS
ETVLTGNLVMALFNHDTSRDQEPQLHTHAVVVNVTQ-HDGEWKTLSSDKVGKTGFIE-----NVYANQIAFGKIYRAVLK
EKVEALGYETEVVGKHGMWEMPGVP---VEAFSSRSQAIREAVGEDA--SLKSRDVAALDTRKSKQHVDPEVKMAEWMQT
LKDTGFDISAYRESADR---------RAEIQAAQPVPSQEQPDIQQAVT---QAIAGLSDRKVQFTYTDVLARTVGMLPP
EAGVIE--KARAGIDEAISREQLIP---LDREKGLFTSGIHVLDELSVRALSSDIMKQNRVTVHPEKSV-----------
-PRTGSYSDAVSVLAQDRPSLAIISGQGGAAGQRERVAELTMMAREQGREVQIIVADRRSQTNLKQD-ERLSGELITGRR
QLQEGMLF---------------------SPGSTVIVDQGEKLSLKETLTLLDGAARHNVQ-VLITDSGQRTG--TGSAL
MAMKEAGVNSYRWQGRQQTPATV------------ISEPDRNV-----------RYARLAGDFVAAV-KAGEESVAQVSG
MREQAILAGMIRSELKTQGILGQQDTMMTALSPVWLDSRNRYLRDMYREGMVMEQ---WNP--EKRSHDRY----VIDRV
TAQSHSLT-LRDAQGETQMVRISAL----------DSSWSLFRPEKMPVADGERLMVTGKIPGLRVS--VGDRLQVSAVN
-DGVMTVTVPGRAEPASLPVGDSPFTALKLENGWVETPGHSVSDSAKVFASVTQMAMDNATLNSLAR-SGRDVRLYSSLD
ET--RTAEKLSRHPSFTVVSEQIKARAGEV---------SLETAISRQKAGLHTPAQQ-------AIHLALPVVESKNLA
FSQVDLLTEAKSFAAEGTGFADLGREIDAQIKRGDLLYVDVAKGYGT-DLLISRASYDAEKSILHHILEGKEAVTPLMER
VPG----ELMETLTSGQRAATRMILETKDRFTVVQGYAGVGKTTQFRA----VMSAVNLLPESERPRVVGLGPTHRAVGE
MRSAGVEAQTL------ASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQA-
--IAPGQPFRLQQTRSAADVA-I-----MKEIVRQ--TPELRDAVYSLINRDVNKALSGLENVKPVQVPRLKGAWAPENS
VTEFSR---LQERELAKAAQEAEKKGEAFPDVPVTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIQDALAKPG
E----QQVTVPVLTTANIRDGELRRLSTWEAHPGALA--------LVDNVYHRIAGISKEDGLITLED-KAGNTRLISPR
EAAAEGVTLYNPETIRVGAGDRMRFTKSDRERGYVANSVWTVTAV-SGDSVTLSDGKQTRVVRPGQDRAEQHIDLAYAIT
AHSAQGASETFAIALEGTEGGRKQMAGFESAYVALSRMKQHVQVYTDDRQGWVK--------------------------
----------------------------------AINSAE----------------------------------------
-------------------------QKGTAHDVLEPKS----EREMMN--------------------------------
----------AERLFSTARELRDVAAGRAVLRNAGLAQGDSRARFIAP---------------GRKYPQPYVALPAFDRN
GKSAGIWLNPLTTDDGAGLRGFTGEGRVKGSEEAQFVALQGSRNGE-SLLAGSMQDGVRIARENPDSGVVVRIVGDGRPW
NPVAITGGRVWGDIPDSNVQPGAGNGEPVTAEILAQRQAEEA---VRRETERRADEIVRKMAEDKSDL------------
-----------PEEKTAQAVRE----IAGQEQDRMTPPEREPPLPESVLREPQRE--RETIREVARENRGRERLQQM---
----EQEMVRDLQKEKTPGGD---------------
>GB|AAU28143.1|52629402/1-1981
MLSLQPL-DSADGAAAYYLDVV---------------------NYYENDSKS----VRWLGDGAKILGIHGQAVEKEQMI
ALLKGILPDGTQLGRIDKDGIHHRPGFDMTLTAPKSFSILLESGADPRLGEVFDKAVEWFVEEMEKEFAQARQLVD-GKI
EYIDTRNLVIAAFRQPSSRANDPNSHTHLVVQNMTHCPDGKWRSLASDMDGQKGVVE-----QIMKHHIYGGLKFRNKLA
NLTKELGYQLASDGD-GLWEIQGAPEQVLTHFSKRRESIEALLDEKGWSGAKASSIAAQKTKLDKEIIDYEKWKEDIIKE
CQEMGFDPHQLVASSYKPQKNLFQTLKENIVERFYGKDNI--EMTHARESVYVAIESISQQHAVFEERELKKEALKYVIA
SNKIIDETLINKAIDENIANQNLYTARHPFTQKPLLTTPWQLTLESEAIQRIENGKGAVSAICSKQKVSEFIKAKEQEMA
FALSPSQKKAMTTFLTSTDRFIAIQGYAG-TGKTTMLRLTRELASLQGYEIRGITAGSAAANELRHKGGLNASTFARELG
RLQNQKQD---------------------LSKTIFVVDEASMLSNPQGHKIIKLAEQFNTQLKIIGDKAQLPSPSSGKLF
SVIQDYGIKTVAMTDNLRQKDSELRESAIHAGRGEIYDAVDKLTHVETLDTYLKRVDYISSKWLSLTPEERQNTLCFAPT
HRNRQDITQILRNALIQEGTLTGQEHLQPILKERNLTGIKLRNAAYYSQNDIIRFNHTIQR--YNIKAGDYLTVGQVTNK
NKHNNTLI-LKHENGQAIKFKLSSLPEFRTENKDLERPVEVYRREQLSLMAGDQIQWKRNSEHNGIR--NSELATIRQIN
NEGITIITEDNQ----TLHLPHGAKELRHLDHGYVLTTYATQGKDKKRGLG---------LIESQNR-FASTIQNY----
-----YVETTRGIWEMIVVTDDKDHLVKAITTNNSDKYSSMDMVDSDTLKAHEARFKE--HKNSIVLQNAIEKKLSKEQD
WKGLEQTVETYVQC-KQQGEDRKAAKLAFAIVNDPKLYRLAKERLGFGVSTYRREALRFQTSKLLHSLPKSERQDFSTVR
QYVFLNQQILKRSQHINAQSLDNGISNQNKQALQQQSAKRNAVAFVISRDLERYKPYLQHFSIGELNRIGL-PQHEYGKE
FKKAQMRLESLGKQATRDLIRTNISLYLNAQGEEKERLAVQIKRESKLSHSFVLTHAKELNQKPESLWQSIHKDARLHSD
KLFRNGLSAEGRLAFDNIKAYKA-----LQLELRENWSASLKEAGNSEGKSSNPKSIELLTRRNELAHELMQNKAMPEIA
S--------YFKLDLAKLAVQTEKQQ----------YRENIKQFTASKSNFKTRLAVINEIKNDITGHYPFIKEANIESK
TLSKYLRVTDRKERLSNISSPEKKDYQCFLTYKKASMQTYR----LWQQAHLNKADGNVQNNKLISAAISQSSKRDALAH
QLKG---SKYLDSILSYEKGNKEKLLAQASNHQIKLREIKELNEVVHTLSMQFPSVTNSNSAKEISAW-KKNWLSLSSHM
KQIEKGSGY------------QLALQEYPLNVSSVNTINKELENNYDFKPETIT--------------------------
----------------------QKSLQSTNPVLQKIQQSA-QFLDARIINEALMADPETTYKTIWGEPKTQNSRELRYS-
----GGLIVSLKGKDKGLWHDFSDGIGGAPIQAIIARDKLS-FKEALSQAASMVGINQLENLSIFIKAPISSKNELQKLN
DLEKKNKVISAKSIWDGSILAKGTLAEKYLKQHRGIESIDKMDIRFWPTGSQWKNCNEQGLLEDKVNKIPALIIAARNEK
NELTGVQRIYLDKQTASKNKFMDNPKLSKGIIDGSCGVIQKGMQGSRLYIAEGFETGASIALADSKATVLCSFGVSNM--
----------------KNLSPIIKKFHSKEVVIAGDNDGEFA------KSQQAIEKTINAFKQDNLSARAVFPDGLQGKA
KTDWNDIHLSKGIAEIQKQLMRKDIGAISSIVDKPIELPKTIADFVQIKSMKLSGSQIISIRDNAATIDNKRDLNQLVAA
YNKSQQALEK--SGSFTPEKTLPTKTRSEIEMDR--