HMM Seed Alignment: TIGR02727

Download Alignment

>GB|AAP05733.1|29835099/9-180
KKKQREFFTSLRQSIQEPRLSQASQAVAAFIR...KLPKGS.FVLSFIPFRSEINIHLTNSILI.NEFSLALPQMHGD..
..QLHPVHVPSLEALSKLTHPLRLSEFN.LEPVPPKQITHVLVPALAFDHNNYRLGYGGGCYDRWLAIHSHP..ITIGVG
FK.EQKTLI..LPREAHDIPLSQVFLA
>GB|BAA98971.1|8979136|BA000008/8-180
KSALRKLFISIRRDLSEERKHEASSAVASFVR...SFSKES.VVLSFVSFNHEIDMQEANRILI.QKCTLALPKIDQE..
..NLYPVLIPSIDDLISVVHPK..DPFSKQTPISSDKITHVLVPGLAFDQQGYRLGYGHGFYDRWLAQHPYPSIRTIGIG
YC.EQKIDR..LPQESHDIPLSQIYLC
>GB|AAQ00193.1|33238126/7-182
KNALRIKFKNIRKATIYKQQKLIFEQAKKLIKSFTENQVKESLIGIYWPLEDEVDLRSLRR..L.KGISIALPACMKKG.
.EITYHRWTEN..PLSKDEYGI.PAP.LSQPPLSPSKLKLLLVPALAVDNNGIRLGYGEGCFDRLRLKAIWQKIPAFVVL
PK.ACIAQSL.LPKDEWDIPFNGWINE
>GB|CAE21313.1|33640858/7-182
KAKLRRQFKALRAQQLPKVQDTIIQQVVNTIQGYLKAGRLRGHIGVYWPLSGEVDLRELKL..N.LKLPLALPVSGEDG.
.SLSYHPWTLT..PLRKDACMI.PAP.LDEAILDADEIGLLLIPALAMDQRGIRLGYGGGFFDRFRSNLAWRKVRTLAVL
PQ.ACISTEL.LPRDSWDVPLDGWISE
>GB|CAE07229.1|33632417/4-175
KQDCRGHFRERRQQQIS.LGSAIYRQVLTMVQ...RSPLRPGYLGLYWPLSSEVDLRPIRA..I.TPNAVALPVADGSG.
.GLQYRCWGDT..PLQADGCGI.PAP.TNAPALSPDKLSLLLVPALAIDHSGIRLGYGGGYYDRLRADPLWAAVPAWVVL
PS.ACISSEP.LPRDTWDVPFTGWITE
>GB|BAC08532.1|22294703/9-183
KGRLRQHYLEWRQHLSDREWQDRSRRICQQLFDHPQFQQAT.TVLTYVPHRREPDLRSLWS....VPKQWGLPRVVGR..
.NLQWHCFDGKEDTLQQGPYGL.WQPSPDAPPIDPAGVDLCLIPAVACDRRGYRLGYGAGFFDRLFAHPDWQHVCRWGIV
FE.AAVVEE..LPHDPWDLRLQAICTE
>GB|BAA17059.1|1652135|BA000022/3-179
KAQLRAQLLQERRQLSEAQWQQQSLELCAQLQQWSVFQQAS.RICAYCSTQREADLQPLFDRLG.KAKVWVLPRCVQK..
.SLVWHPWQWG.QPLTTGAYGI.KVPADQTEIWSPNTVDLLLVPCLAGDRQGYRLGYGGGYYDRLFADPLWRAVPKVGIL
FE.AGLREK..LPHDPWDMPLQTLVTE
>GB|BAD78443.1|56685221/9-182
KASLRRQLLAERRSLSVVERQQYSQAIAVHLQASSLFQRAT.TVLSYWPLGAEPDLRSLLL....QPKQWALPRCQNQ..
.RLYAHCYQFE.QPLAKDCAGV.LAPLADSLTVSPAEIDLLIVPAVAVDKEGYRLGYGGGYYDRLRADPAWRSIPAIVVA
YA.AQIMSE..LPHDPWDIPFSAVCTE
>GB|BAC88700.1|35211321/3-171
KADLRVQCLGRRRALSPEACERMSERIRAYLSGR.LESTDR.CILAYLPFRNEPDLRPLFA....DSRTWAVPRVAGT..
.ELTWHRYEPG..RVGRGAMGP.PEPEPDCEAVDPAGAAWVLVPVVACDRRGYRIGYGGGYYDRFLAR...YALPAIAVG
YS.EFVYEQ..VPTDPWDRPMGGIVTE
>GB|BAD71434.1|55772993/3-166
KAELR...RRARAAWRRLDLKALSRAVGAALLPWLRERGFR.HILLYHPLPHELNLLPLMEA...YPARYYLPKVAGK..
...GLTVHPFG..PLAPGPFGL...LEPTTPPEDPRVLDLVVVPGLAFDREGYRLGHGQGFYDRFLKEVR...AATVGVV
PQ.ALLFPA..LPRDPWDVPVDHLATE
>GB|BAD59806.1|54018436/13-188
KHAWRREILARRSALSAAEHAAEAAALARGVR.ALAVG...EWVCAYVPVRGEPGSTALLEELRAAGARILLPVTGAPG.
.ALDWAEYTGV.AGLRAARFGLLEPAGPVLGAEVVARAEVILVPALAVDRRGVRLGRGAGYYDRTLGSARPGAR...LVA
VVRDEEFVDR.LPEEAHDLRVGWVLTP
>GB|AAT88551.1|50950850/10-187
KRALRAELSERRQNLTSTERQAATAGFTRQLV.DLATDLSARSIACYLSTTIEPNTRPFLNWAREHGLRVLLPISREDG.
.LLDWTTGDGE.T.ETEGLFGMPEAVGELLGPIAINDVDLILVPAAAVDATGMRMGWGRGYFDKILGSMEKCPP...VYA
VLYDGEVVDE.VPRERHDRPVDGAVTP
>GB|CAE49378.1|38199718/11-187
KKNARNRIRAARLARSTADLHADNAAILNQLT.ALIRTINATRAAAYMPEVTEPGGVDFADNLTGILSELWIPKSLPNR.
.QLVWGHYSGG.DSVERGTFGILEPTTPSRSSDILHDVDLIIVPALGITPSGRRLGQGAGYYDRALA.GVATP....TVA
ILFDSEVNTT.IPFEPHDATCDWIITP
>GB|CAF19586.1|41325105/5-182
KQELRTKLREARTNMDEASRTRENAAIIANVS.YYIRSKQPKRIAAYVPVRTEPGGRLLLDALHAETSALILPVSLEDR.
.RLDWALYEGP.TSLVPGAFGIQEPGGTRLGPEALNFCDLVIAPALACTPSGIRLGKGGGFYDRALATGVKAD....VIT
LLFNGEIRDD.IEVEEHDLPVNVIITP
>GB|CAG73377.1|49609939/16-199
RQQIRQAVRQQRRLLTPEQQRLFALQACERVM.AHPKIIRADNIAVFLSFDGELDTPPLIQQLWQQGKRVYLPVLHPFRA
GYLLFLRYAPD.TELVRNRLKIMEPRLDVRQVLPLPQLDILLTPLVAFDHQGQRLGMGGGFYDRTLQYRNQMSRGPYPIG
LAHDCQQVDA.LPVESWDIPLPEIITP
>SP|Q8K9E3|Y396_BUCAP/9-190
RKEIRSYIRIVRNSVTLTKKYDESNKIVRTAF.NCNIIYNAKNIACFLSFDGEINTYPLILKLWLNNKNVFLPIVSSSYS
RKLFFVPFTCK.SILYYNQYNILQPFYNMKDIILESDLDLIIVPLVAFDCRGVRLGMGGGFYDQFLKNWERKK..FIPIG
MAYDFQFVNY.IPRQPWDISLPIVLTP
>GB|CAH14860.1|53753407/6-183
KVALRNTIKQVRSKLSVSYRTASSNQICTRIR.SLEQYRQAKRIALYFAVNGEVDLTFLWKSAPLQGKYCYFPVLN..ND
STLSFLPATPN.TPFKTNKYDIPEPDVDIELALPVNELDLIIMPLVAFDAHCTRLGMGSGYYDRTLSDKSKAH....LLG
VAYQFQRVDY.IEPRPWDVPLDAVITQ
>GB|AAY47975.1|66572565/5-184
RDALRQQLRAARRSLPAAQRLAAADALAERLL.ALPFAPQQGAVAGYWAMDGEIALHRWQLSLP.QGVRYCLPVLDG...
RVLRFAPWKPG.QGLVSNRYGIPEPDVDRADTLGPEDMDLVVTPLTGFDAACGRLGMGGGWYDRSFAFRHRQAPPPWLVG
VGFAAQQVPA.LPVAAWDVPVDAICTE
>GB|AAL44541.1|17742155/8-185
KARLRGERLAARDALTPAERQQKSLSMTAHGV.SGIPFAPGTVISGFMPIRSEVDTRPLMEALRARDGRLVLPVVLDQ..
ETIVFRVFEAD.TPLVKTGFGTTGPGEDAEVLDP....HILLVPLSVFDGEGQRIGYGAGHYDRAIARLHAKGRQPVLIG
IAFDCQEVAS.VPAEPHDVALHAVLTE
>GB|BAC46792.1|27349779/51-227
KAELRAKALAKRDALSEKKRAAAATKLAKRG..LPFKLLPGSIVSGYSPIRSEIDPMQLLRKLAEEGARLALPCVTARG.
QSLVFRIFHPN.DRLMLGPLGIPEPSPAASEVIP....DIMLTPLAAFDRLGHRIGYGAGHYDFTFAHLR.KTKQIVGIG
LAFAAQEIEA.VPALSHDVALDYVLTE
>NTL01ME1366/78-253
KASLRAEALSRRDALSPEARKAGSLRAAETIA.AIPELAEAPLVGAFWPIRSEIDPRPLIERLFARGQRVALPKVTKQ..
.GLVFREWRAG.EELVSGGFGLSEPRDDLPPLDP....TALIVPLAAFDRAGQRIGYGAGYYDQAIERLS.KNGPVLTVG
IAFSVQEIAR.VPAEPHDRPLDHLVTE
>NTL03RCD0165/8-177
KAAARKTAFGARKSAFAAGQG....AACAHLL.AALMRFEGAPMAGYLPIRTEIDPRPAMAAHR...GAVGVPVIAGEG.
LPLTFRAWTPE.APLIPGPFGALVP.ETGAEITP....RVLIVPLVAFDRRGFRLGYGGGFYDRTLERLR.AAGPVTAIG
FAFAAQELDT.VPTEPTDQPLDLIVTE
>GB|AAW60009.1|58001115/13-180
KKDLRLKMAQLRQAASPDDEA....ALRKFLL.KEILARPAHRIAAVWPLAGEVDLRPLCHALSASGRQVLLPETTPKG.
SPLIFRRWTPA.GIMTAGRFGTSHP..EGEIDIP....DLVLVPFLAFDASGYRLGYGGGYYDRTLAMLD.....VPAIG
FGFAGQQVER.VPRGPYDIPIPAIVTE
>OMNI|NTL01SM00075||15963828/1-175
RTSERARLIAQRLAISPDLRAACEAEIVSRLL.AEIGHVRGRVVSVYWPFRGEPDLRPLMRQIADDGGQCALPVVVEKG.
RPLEFRIWRPG.DKLIRGIWNIPVP.ARLVSCTP....DIVVAPVVGFDPSCYRLGYGGGYYDRTLATMA...ATRRVLG
VGFAQSRIRT.IYPQAHDIRMDVVVTE
>GB|CAD83968.1|30179973/10-184
KQQQRARLRELRQQVPVTQRMLWSDAITAVLT.QGFPFLENQRIGFYWPHQGEYDPIPAMTFLRTRGATLALPEVISKD.
EPLRFIEWWPE.APMKKDIYGIPFP.DNTRGITV....DSIIIPLLGFDEQGYRLGYGSGYFDRTLAAMS...PRPLAIG
VAFEILRLPT.IHPQQHDIPMDYIVTE
>GDTORF2066/5-175
KKILRKELKEKRR.KIEEK..EEKSHQIFHNLQKLTIWKNAKIINTYVSLEDEVDTRFIIYHGLIEGKRIFCPI..IVKD
DLKFGEIFSFN..DLKKGPLGILQPEK..STIVK..HFDLIIVPGIAFDKRGYRIGYGKGYYDKFLNKMKE....TIKIG
LTFDDLLFEE.LPYEDHDQKVDIVITE
>GB|AAL95098.1|19714465/4-176
KKEARTLIKERRM.NLSKEYIDVASDKIFEKLLQNEDFKNVKTVMSYMDFKNEVKTDRINTFIKNSGKILVLPK..VVDK
ETMI.VIEDKN..QYIVSPFGNKEPDG..EEYKG..SIDVIITPGVAFDRDKNRVGFGRGYYDRFFVKQPN....AKKIA
IAFEKQIIDEGIETDKYDKKVDILITE
>GB|AAO79363.1|29341576/4-178
KKELRKLMASLKIRHASSTLQKLQSAKILAALEAHPAFRAATTVLLYHSLKDEVDTHAFIRKWSNE.KRILLPV..VVGD
ELELRLYTGPE..DMATGTYGIEEPVG..ETFTDYADIDFIAVPGVAFDRKGNRLGRGKGYYDRLLPRIPA....AYKAG
ICFPFQIVEE.VPAEAFDICMDIIITS
>GB|1SOU_A|50513600|1SOU_A/3-175
KSELRKKVLHKRI.NLSEEERRRLSEKVISNLKSLPEFKKSKKVALYCPIKGEVDLTPLFPEVLKE.KELILPK..VEGN
EISLYRVHSPA..CLGVGAFGIMEPVE..GERVNPEDVDFIAVPGVAFDLEGYRLGFGKGYYDRLLKRVK.....GLKVG
VAYSFQVFER.LPRDAWDIPVDVLVTE
>GB|AAR34512.1|39983118/3-179
KRVLRQSMLALRK.SLAPVEARWASEAIQRSFVESEGFRNARVIALYAPIRGEVDTSDVLRLALDQGKTVLLPA..VCGD
ELRFIEVTDPA..GLRSGSFGIPEPCLT.GKAVAPDCADIIVVPGVAFDLAGHRIGYGKGFYDRALHHLEGT...GRLVG
FCYDFQLVDE.IRGEPHDVALDLIVTE
>MXAN2978/18-196
KQTLREELTARRK.AMTPDLIDTRGLKVQSRFLAAPYYQKARTVALYAPIRGEVPTRDILIAALQDGKIVCYPLSHVHGR
ILSFRAIKSES..ELEPGRLGVREPTNS.ADLIAVDQIDLFVVPGLGFTREGKRLGRGGGYYDATLRAASQR...SRRVG
LAFNDQVVPV.LPTTGDDVDMDLVVTE
>GB|AAT33608.1|47504932/5-182
KLRLRKQIIEHMNSLSKERYTTLSEQIVFSLY.EQKEWAEAKTIGITLSMENEVNTYPIIEKAWKEGKRVVVPKCNKETR
TMSFRQISNFD.QLET.VYMNLREPIPALTEEVNADEIDLQIVPGVAYTERGERIGYGGGYYDRYLVHYKGKT.....LS
LAYSFQMVE.HIPVEPFDKNVEKIITE
>GB|BAD76734.1|56380826/5-182
KQEWRQRMLNQLRQLKAAEKEMYDRQIAAHLY.RWPLWQTARTIAMTVSRETEVNTLPIMEQAWREGKTIGVPKCDPRAK
TMSFRRLESFA.QLEK.AYAGLFEPIEKQTTPIDRDEFDLIIVPGVCFAKTGYRIGYGGGYYDRYLPGASAVT.....AA
LAYSFQVMD.DIPAEEHDVPVKFIITD
>GB|BAC13880.1|22777608/3-180
KQILRKNMIQQLNELSQDRRKSIQSKQQHLLF.HSHLWKNSLTIGITVSKGFEWDTKQIIQQGWKENKVIAVPKCNPIDK
TMTYRQITSFE.QLEV.VYAGIEEPIMEHTSPLENELLGLCIVPGIVFDKNGYRIGFGGGYYDRILPSIQAPT.....LS
ICSEVQIIS.SIPKESHDLSVDYLLTE
>SP|P54491|YQGN_BACSU/2-179
KSQLRKKTLEALSALSNEDILQKTERMYKYLF.SLPEWQNAGTIAVTISRGLEIPTRPVIEQAWEEGKQVCIPKCHPDTK
KMQFRTYQTDD.QLET.VYAGLLEPVIEKTKEVNPSQIDLMIVPGVCFDVNGFRVGFGGGYYDRYLSEYEGKT.....VS
LLLECQLFA.HVPRLPHDIPVHKLITE
>GB|AAU24178.1|52004236/2-179
KRSLRSEVRKRLANMPEQEFHLKAEAIHRKLF.QSKQWKKASVIALTVSRNREVPTKPIIEQARLEGKTVCIPKCMPETK
KMHFRSYQDES.DLEV.VYFGLQEPIVHKTERMEPEDIDFILVPGICYDRRGYRIGYGGGYYDRYLAGFTKDT.....AS
LAFECQVIG.HVPNEPHDIPVKQVLTE
>GB|BAB05136.1|10174034/4-181
KKALRNRIKKLLRSQPEQQRKEGSQRVADILF.SLPEWNEAHAIGITISLPHEVQTELIISRGWEEGKQIAVPRVKKGTT
QMTFYEIHSFS.VLED.TFFGLREPKPSECRQIDGQELDLLLVPGVAFDQKGNRLGYGGGYYDRFLHSYKGKT.....IA
LAYSQQLVE.SVPTDERDERVQMIVTE
>GB|BAD64257.1|56909730/4-181
KQNIRNDVSKQLNMLPAHVYKQRSTRLADLLM.QQDVWNQATTIALTVSRFPEVETAPLIAGALAENKKVVLPRINMKER
TMAFFYITSTE.ELVE.NKYGLFEPKQEEACLVRPDELELIVVPGVAFTKAGKRLGLGGGFYDRFLPSCSGLT.....VA
LCFREQLFS.DLPTEPHDVLIDKVISD
>GB|AAW54521.1|57637733/3-176
KKGLRRNIIKKMKSYDKEQKYLADEWLAKKLY.QSEAYRKANTIGFVLSMPHEVNTYPIITHSLNNNKKIFVPETNYQQQ
DMTFKQLLSIE.DIEK.DSKGIYHSISP...VGTTNKMDLVVVPGVAFDKLGYRIGYGGGYYDRFLSQHKCNT.....VS
LLYDFQLAQ.FNI.EPHDQPVEQLIIY
>GB|AAM99309.1|22533421/3-175
KKLLRKEVLITLKSQPQAYKSEVDCKLLEAFI.KTKAYQNSCVIATYLSFDYEYNTQLLIKQALCDGKRVLVPKT.YPKG
KMIFVD.YQKD.NLRT.TPFGLLEPVND..RAVEKASIDLIHVPGLIFNNKGFRIGYGAGYFDRYLSDFEGDT.....IS
TIYRCQRQD.FVE.EKHDVAVKEVLCL
>GB|AAK04267.1|12723020/4-171
KAENRKKILQMLKNFSDYEKRRQNKDVLKQLT.ASSKWKSAKKIALYMSMPIEFNLTELFDQS..DDKEILIPKC.LPER
QMIFAK.YDKE.NLVR.SKFGLLEPKSE..IAVEP...DFILVPGLIWNDEGYRIGFGGGYYDRYLANFEGST.....AS
VLYDFQKMD.FEA.ESHDIAVQELFIG
>GB|AAO35597.1|28203154/4-182
KKELREKSMVKRDGLSKDKINEYDGNIFERVI.ESKYYKEANCIFIFVSYKSEVHTHEIIKRALKDNKRVCVPKIISLKD
GMEVIEIKSFS.ELKP.GEKGILEPVDF.SRKVDPMEIDIVFTPGLAFDNKGGRLGYGGGFYDKFFKRLKKDTP...KVG
LAYSFQIVD.FVPMYEWDVRINDIIVN
>GB|AAP77185.1|32262136/31-202
KQDFR.LSAKARLNQRSIYGYFADKSLNRFLL.TYLQAKSVRNILVYMPFGNEVDIFPLICKLRKKKYRVFVPFIQ.ELS
FKMIPLR.....MPFHKNKYGIYES...NNSTFKLIKVDAVIIPVLGIDKHFRRIGFGRGMYDRFMSHLKGKV...HTIF
VAR.SPNYAASVITEHYDVQGDCFFTP
>GB|AAW35663.1|57166884/3-172
KTDFR.ALQKIRLFKHSKLNFKQDYKIFKECL.KIIKLFKAKNILIFIPLHYEPNLIKFRHILNKN.YKLFVPFMQ.DKS
LKIVKLR.....LPFIKKRFGVLEP...IDSFFK.AKIDLAIVPVIGVDKNLKRIGHGQGFYDRFFENLNYKP...HIIF
VQS.IDALSQNNLTQKHDISGKLYINP
>MCAP0467/3-179
KSILRKQLLEKRKNFDLDYINTSNLLITNKVI.EFIKKNKFKQICIYLSTKYETDTKKIINWCLENDILVFVPKVLNDNN
MNMVLLN..NS.SLTNLNKFNIYEP..VSDIKASLDQIDCIFTPLVGFDEKLNRIGMGKGFYDKFFSLNSYNY...LKVG
ICFDKQK.TKQILVDANDIKLDYIITE
>GB|AAT75607.1|50363622/4-185
KNQIREKFLKTRSFLSKSYKEEVNKIIERKVN.HYIDRYNLEKYAIYLSTENEPNTLNIIETSLKKGIEVYVPLIIEDNK
MEFKKITNLET.DLEQNKVLNILQPKSTCSTLENGNYINTMFIPLVAFDKQLNRVGMGKGFYDRWLNENDYIG...YKIG
LSASTQLSNESIDADEFDVKFDNVITE
>OMNI|NTL01MG0379||31541428/1-177
KQIVRKQLIELAKQFASTPKKQIVDQQLTKLVYQFIKTKDYQKIGVFSSLFYEYDTSELINLLLEEDYQIYLPRVDNNEM
NFYQIKQLDFS....FDLKYQIKQPLVNEQLLNN..HLDLFIVPLVGYNSNQLRLGHGKGYYDRFFNNLKYSN...YKIS
VAYDFMLNNQ.FQAQDHDVKIDKIFCV