HMM Seed Alignment: TIGR02562
Download Alignment>PIR|AD0301|AD0301/1-1091
MNILLISQCHKRALNETRRILDQFAERKGDRTWQTAITQEGLNTLRKLLRRTARRNSAVACHWIKSNNQSELLWIVGNLR
RFNAEGTVPTNTTQRDILRSQDENNWHSVETIALLAGIAGLFHDFGKANVLFQQGLQG..QGKT.YQPYRHEWVSLRLFQ
AFVE.QKNDIQWLTALSQINPADET....TLMSNLVKDGLDD...YTNPLA..ALPPLAKTIAWLILSHHRLPVYPSK..
DYHRPPKVEEIDDWLHQQLMPVWNSTN.MDSGDWREKDKLDVWRFPHGTPLQSAEWCKKAQKFAKRALRQPSLVNDGHLN
QRFTSHMARLVLMLADHHYSSLPATPGWQDKNYQVFANTHNKMRDANAHSKTIEMKQRLDEHNIGVGQNALLLGR.SLPH
IRKTLPAITRHKGFKQRSVQEKYRWQDKAFDLAVTLRERSLQQGFFGVNMASTGCGKTFANARIMYGLSDEKQGCRFSVA
LGLRTLTLQTGTALQQKLTLQKDDLAVLIGSQSVLQLYQLNNDKLEPRG.TGSQSADKFFSEHQ...YVSYDGSLDDGRL
STWLSNNDRLKRLLCAPVLVCTIDHLIPATESLRGGKQIAPMLRLLTSDLVLDEPDDFDRNDLPALCRLVNWAGMLGSRV
LLSSATLPPALVQALFNAYRAGRADYQQASGQPDTPVNICCAWFDEHGVAQQDIQQSKDFIQHHGDFITRRVGKLSTAEV
LRRAELIPVSSA.SVK.NGSVLDAMAAVMRDSMLRLHQAHHQTHPSE.KTVSVGVVRMANIDPLVAIAQRLYAMAAPEN.
..YRIHYCVYHSQHPLAVRSAIERRLDVTLTRYQP........NALWQVAEIEHALQHHPEQHHLFVVLATSVVEVGRDH
DYDWALAEPSSMRSFIQLAGRVQRHRQVAPQ.MANMHILQKNFKALTQKD.........PAIPVYCKPGFETTR.CRLNT
HDLDKLLLPSQYKVINAISRIQERTKLEPRDNFVDLEHLSLRLILQG....SAEPLKYYAALWWRKQATWSGEQQRCTPF
RQSSPDEQ..HNLWIDDEADKPVFKRLDSDQIEWKVSDG........FQDVELTLAAGNSAWIDTDCLRIYQWLAESLNK
ELNEVSR.QFGEVRLP..KKDGERWHYHPLLGVF
>GB|AAQ59429.1|34103066/1-1101
MNILLISQCDKRALTETRRILDQFAERRGDRVWQTPITQAGLDTLRRLLRKTARKNTSVACHWIRGRDHSELLWIVGDAR
RFNLQGAVPTNATQRDVLRADDENDWLSGEDIRLISGLAALLHDLGKACSAFQVRLRP..NGPAGANLYRHEWVSLRLFQ
AFVG.DDDDAGWLSRLQDPAKIDGASWIKRLKARKLRDGLDADARHAKPFAPGALPPLAAALCWLVLSHHRLPQQAG...
DITALRMQSGLA.....ELDAGWNQPL.SEAG...RREIETYWTFPYGLPCDDALWRDRTAALANELLKRQPGQPAPWLD
NAYLMHISRLLLMLADHHFSSQTVKQRWQREDEDRIAFANTLKNDPQRR.....FNQTLPEHLTGVARHALAAAR.ALPG
LARELPALGMHKALRQRSADPRFRWQDKAFDLAAGIRDKAAAHGAFIVNLASTGCGKTLANARLLYALANPAAGLRCAYA
LGLRALTLQTGLALRDRLRLDDGDLAIRVGGAASRELFEHYANAAEQ...SGSESSQALLDEDS...HIRFDGNPDHP.L
LQKLSHDPRFNALLAAPVLVCTVDHLTPATESARGGRQIAPMLRLMSSDIVLDEIDDYSMEDLPALTRLVHWAGLLGSRV
LLSSATLPPALVSCLFDAYLAGRRHYQANRGQPGLPLNVCCLWVDENDARAADCAEAAAFAAAHLDFARPRAQWLAKQPP
RRAAELLPLSGL.PRHGNASFYPALAERLREGALRLHRLNAETDPASGKRVSVGLIRIANIDKLYQLAQSFYALGRLDG.
..VQIHLCVYHAQYPLLLRSAIERRLDAALSRHDR........QALFRLPDIRQRLDANPAADQLFIALSSPVSEVGRDH
CYSWAIAEPSSMRSLIQLTGRVRRHWTEPYA.PLNLLILQQNIKSWLE...........PDKAAYLRPGFETEREYRLDS
HDLAQLLREDEYRHPDARPRLLPSAALQPKTRLADLEHVRLNAELNGDRPQDAQARLCAASCWQIKHAMLHAGLLRRQPF
RDSQNREEREMMLLPNEEEDDFNLVWLAEGDKRYQKNERPSDYLMHRISDEALFRADGISPWSNESYLNELERLAAELEL
PLADCAR.RFGCVSLPFDQNHHQGWRFHPALGFC
>GB|AAK02396.1|12720548/1-1106
MNILLVSQCQKNALTETRRILDQFAERCGDRVWQTAITQAGLETLYKMLRQTARKNTAVACYWTHRKNSAELLWIVGDRR
QFNDQGRVPTNRTQRNILRAEEEMAWQDAYSLQILTALSALLHDVGKSSVGFQAKLDKTKNAPRVADSYRHEWISARLFE
AMIEGCQTDQAWLERLANWQVFEETN..PTWFSKIIQDRPNEN..HFSDFA..YLPPLARRVIWLITSHHRLPFTHDISR
SQDCIKNLRKYAKLTFESLFKAYKPAVGWVSNGTEHPTPQAFWQFQR.VATQSQAWQKHMARWAKKALNHPALFSVSENA
DPFLLLLARLCLMTGDHYYSAQDQNEKLGELNFPLLANTYRENHQ.........PKQCLDEHLIGVCQTAVRFAR.LLPK
FPRELPRIKQHKPFVQ.LAKDRFAWQNKAVNVARLLQQTSESQGFFGVNMASTGCGKTLANAKMMYALNDSKQGARFTIA
LGLRVLTLQTGSALKKRLHLSDQNLAVLVGGSAVKKLYALQQEKQNQLAQQGSESAEDWLEDMQVEGATYIESAVENEAI
LSFLSKDDKTKKLLYAPIVSCTLDHLISASESVRGGHHIVPILRLLTSDLILDEPDDFAQEDLPALSRLVYLAGLFGSRV
LLSSATLTPDFITGLFKAYQAGRKIYNQQKG.IVAALPICCAWVDEFQQVQANCGQDEQFIQQHDEFVRKRAENLAKSPV
RRQAEILSLPSLKPREGEELHYGLLADTLLQKAIALHDLHGQTDPHSQKKVSVGLIRFSNIEPMIPLAKALFGLQASEKF
ADYQVHLCCYHSRQLLLLRSYLEEKLDKILDRHTP........EQLFQHEEIALPMSQYKAKNHLFIVLGSPVTEVGRDH
DYDWAIVDPSSMRSIIQLAGRVWRHRAEKVAEQPNIALLPINWRGLKVRYQ........QKDVIYHRPGFESHQ.HKLAT
HKLDQLISQRDLAHIQATPRIVKPEVLQASTQLADLEHHAIASLLNH.....PSENLVNLYWDPRYCNYLLANLPLMSEF
RKSMAELE...VVCVPDDDSHWGFGFYRAQKRDEETLSALP...EIQYEPIQQDKHAVVQPWLVASLDTVLSDLAEQLNV
VSPEWIAPTYLCASLP.QYDGQLDWHYNEVYGFW
>GB|CAG69246.1|49531534/1-1076
MHVIIISACEKRALKKTRAILDSYAIRTGHSSWQAPMTIEGLKEIRSALKKVATRQTAVAAYINFGMRRMKLAWVVGAKH
KFAHDGAYPVASIKK.QQKLLMLDEWVKAS..SLLAGAAGDMHDIGKASQHFQNKLSPEMAGQKIRDDIRHEWLSLKLLQ
QLRK.....NGWNWQLAWKNLDKGLDKFTLGDRQEIEQGIQN..............ELEAVDYLVVTHHGLLGVEEALKN
DPLALPHYENHVRTLVPSREQIS.......................CAGELPDSIFKSHQKRMQRLTALIPKQKTDQLLY
WKALALHSRAALIHADHIVSAQQYSLQKPE.NVALFANTKLKNIDQDKK..AKLQDQPLEWHLHQVGDRASRIAVQMMTD
LSLSGLSEQTVEYICQPTTHPRFQWQNIAANALQKNIQKHPETPALVFNIAGTGSGKTRMNLRAACTLRPDDP..RIAIA
LNLRSLTLQTGHALKTSMNLSDDEIAVIIGDTITQTLFDQSKEKIEFVDEDENRPEPIFDAWGEDCNLPDWLHPLFTIEK
NGRKVLDQKETTILASPLLVSTIDYLIAAGEPHQQGHHVKALLRIMSSDLILDEVDGYEPKALIAVLRLVQLAALYGRNV
ICSSATLSLTVAKTIHRAFESGIQMRAALYGNEKKSIIAIIDNELKPQVWLERSNQKSEFDTRYQNHLDDLQVQLLSKPT
HRLAQLLSLSET........TVLSWKQSVLEGVKQLHQAHAWSFRKTEKKISLGLIRVANIKHAIRLAQFLSDHLPEAK.
......IACYHANDWLISRFYKEQRLDQLLTRHKDGKKRKTGNEQIEQDDEMIDLMQNSDSLNVPFIVIATPVEEVGRDH
DFDWAIIDASSVQSIVQTAGRVNRHRLEKVQ.QPNIVIPEWNYRYCERRDIEKRKQQSKQRRPVFIYPGYEGYGVSATST
YSSQRLNELLPWDHQSQLVINARLRFDQVGCLFAKLDDEQIKDFCKN...YFNDQGEQLFSRSDVDASIMTENIYNITPL
RERNYQETYMFEWAESLIVKKQVYGFDEKATKNLKYRKYG.....LVWEQVKFEEIPAKSQAWLALTPQQMKDYCYEYQI
ANEQGCR....ISLTPYNRDEVPTWSYDYGFGVF