HMM Seed Alignment: TIGR02500

Download Alignment

>GB|CAH19553.1|51587950/5-402
FKLRLLNGDLNGRELILPEGE.FTLGEQGCDVLLPLSDGNIV....TLCVNE...........................Y
QVMIQVAEE..............................VWING..AQHDLHTPLPLLQSIEIAGLVFVLGEQTDILSGI
KVTHRARFPLLVWLAIAIC.....VPLS..LLFVFLFWLTTQPETLRASIP..ADVPTQLA......ERLREPALQGIKG
TWLA.DGSVTLSGHCASSSMMEPLQHFLLRNHIAFRNQ...LVCDDRLIASVSDLLHQHGYH..................
........................................................................DIEVRIGD
EPGNIVIYGAVQMGDQWLTVQDTLAAVSG..LKGWLVVNAHSGQIQQLVERLRAAGLLGFLSMT..ESNKELAISGVLSS
EQQQQLKETLAALSQQQPG.FPSVRYQNIPASDRTDQFLPAKVVSYGG.........................NTQSAFV
RLANGGRLQQGSVLANGYKVVFIG.EQGLTLLKANNLVHIPM
>GB|AAQ60266.1|34103906/5-405
FKLKWLNGPLAGRELELPAGE.LRLGGDDPDIALALEEGAAT....VLTVTP...........................E
GVTMAPPVP..............................VWVEG..LPWDAGQALPLGQAIDLAGQGLVLAEADAALAML
TLPSRRLPEVATTKPAARS.....WRLAGGIVLICAALATAVLLWPKPVEPPLFDARAWLA......REMADPGLSGVKA
EWDE.RGVVRLSGLCASSKAIERLRGRMREQGLNFSDE...SLDADTLRRQVRQVLELNGYR..................
........................................................................EVEVSAGA
KPDQVVIHGAIQANAAWLRASTQLRAISA..LNGWRVVNDRAELFGRLVDRLSRQRLLDGLSIG..VSGQELLISGQLPP
ERARAVAAEAAAFNADGTR.LK.ARFQNIPAAAPAANILPAAIVSVGG.........................NANSIYV
ELANGMRLQQGGTLPSGYRIYALS.HTALTLIQEQRLVSIPL
>GB|AAB06000.1|1181168|ERWHRPI/2-310
HELRVLTGLHRGAALPLSGQQ.WWIG.AAQDADLALFDPGIK....DRHCRL...........................S
KTDLGWEVT..............................ALEGP..LNDNEGQRCEQLTDLQPG.TAFALGH........
.................................IWLSIVSASMPWP.........EENDEP......MQEEEIPLAGAAA
VAV...ATDDKPAAVAATLEKRPLPLWAKAVYLLLS...............LLLVMMLGGWL..................
........................................................................LQDSIASP
S.......APPAPGKPLLSSVERTR....................QVVTSMLLDRGLDRSVTLS..SDSNSLTLSGSINS
EDNHRLERMLANLYQH.....FDVKLPIHNRATTVSMRLPFTIVQIS..........................SGPHANI
VTADGQRIFIGDEIDR.LRLVAIN.ADSLEFA.GRENIRVKW
>GB|AAS20438.1|42561996/2-324
FELRVLNGQHQGAALPLVGEQ.WSIG.SAAQHDLALDDAGVE....SLHCRL...........................Q
RLDDSWTLN..............................AEEGA..VCDEEGN.ARPGIDLTLN.TAFLLGS........
.................................VWLCVSPAGDEWPSVPAVIPKQPQADPE......PVRNDVPLKKVKS
RSQ...LLIRTTGIIAGLLVGVIGSAWSLTRPPAIA...............MYQSPGHMASV..................
........................................................................TAEAPVET
SPTPAKIIKPVADKRIRLTSADAVR....................HQLGTMLSDR.LLTDVSVE..ETAEGLVLNGDLKE
ESLLVYQRMLQRFKDR.....YESPVTVFDNVASTRSALPFVVVQIM..........................TGPHAHL
VTADGRRIYVGDEVDG.LRLTRID.NQRLQFD.GNRHIEVNW
>GB|AAL20319.1|16419916/12-400
WKIRFLGHVLQGREVWLNEGN.LSLGEKGCDICIPLAINEKI....ILREQA...........................D
SLFVDAGKAR.............................VRVNG..RRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADY
QIPVSRSGYWWLAG.................VFLIFIGGMGVLLSISGQPETVNDLPLRVK......FLLDKSNIHYVRA
QWKE.DGSLQLSGYCSSSEQMQKVRATLESWGVMYRDG...VICDDLLVREVQDVLIKMGYP..................
........................................................................HAEVS.SE
GPGSVLIHDDIQMDQQWRKVQPLLADIPG..LLHWQISHSHQSQGDDIISAIIENGLVGLVNVT..PMRRSFVISGVLDE
SHQRILQETLAALKKKDP..ALSLIYQDIAPSHDESKYLPAPVAGFVQ.........................SRHGNYL
LLTNKERLRVGALLPNGGEIVHLS.ADVVTIKHYDTLINYPL
>SP|Q01245|YSCD_YEREN/3-412
WVCRFYQGKHRGVEVELPHGR.CVFGSDPLQSDIVLSDSEIAPVHLVLMVDE...........................E
GIRLTDSAEP.............................LLQEG..LPVPLGTLLRAGTCLEVGFLLWTFVAVGQPLPET
LQVPTQRKEPTDRLPRSRLGV..GLGVLSLLLLLTFLGMLGHGLWREYNQDGQLVEQEVRR......LLATAAYKDVVLT
SPKE.GEPWLLTGYIQDNHARLSLQNFLESHGIPFRLE...LRSMEELRQGAEFILQRLGYH..................
........................................................................GIEVSLAP
QAGWLQLNGEVSEEIQKQKIDSLLQAEVPGLLGVENKVRIAGNQRKRLDALLEQFGLDSDFTVN..VKGELIELRGQVND
EKLSSFNQLQQTFRQEFGN.RPKLELVNVG.GQPQHDELNFEVQAIS..........................LGKVPYV
VLDNHQRYPEGAILNNGVRILAIR.RDAVIVSKGKREFVIQL
>GB|BAC59958.1|28806687/4-422
WKIRILSGVHSGVEVTLPEGA.LVLGSDDFIADLVLSDAGVEANHFTLVCDS...........................E
SVMLRGCQDV.............................TINGENRAVGESGIELERHAVISVGVVKFALGYVEDELIVT
NVTDAQTKQDAPVVTAQSTSW..KRTALIAVLCSAIPSAIFAGMWYSQANGNDSEVVAEAEPIVLVRNILNELGLNDVRV
EWNATAHQAVLEGYVEDRTQKLQLLGRIDVLGINYKSD...LRTMEEIRRGVRFILRNLGYH..................
........................................................................QVKVENGD
ETGTLLLTGYIDDASKWNQVEQILERDVPGLVAWKVELQRAGAYMDTLKELLTNAELLKKVQLV..TSGDRIEVRGELDD
IETTRFYGVTRDFREQYGE.KPYLVLKSIPKVSKG.TDIDFPFRSVN..........................FGQVPYV
ILTDNVRYMVGARTPQGYRISSVT.PAGIELVKGGRVITIEL
>GB|AAC38402.1|2897964|AF022236/5-404
YKIKLLNGAMRNRELQLPMGN.LTLGTEDNDIVYFPLEQVLN..QFLLDIRE...........................E
GVFLLSPVE..............................FWIDGQPTPYEADKPLPVGKIIDIAGCCFIIGDIDHSLPLS
DVPERFSAKNQRKKRLILAS........VIGATFALSGAIGSYVLLSPKAEPPTFTRADVY......QQLKENKLHAITL
VWHG..KNIALYPGGESTTDLTPFFNYLKEKNIFYYNK...IICNNQIISAINDVLTEYGYK..................
........................................................................DIIITKGN
KPGFFLLSGYIPPSPKWSEVENLLLNTPG..VAGWEIHNNSNNKINELASEFKKNKLINYVNIF..KKNDVIIVAGEVSQ
QNESKILAIINAMNKNSN...VKILFQNIQPYISA.DIFPGKILRISG.........................TMKNPTI
ALDNGTSLGIGNILKGGYVIDAIDPKDGINISRPDEYIHIPL
>GB|CAE42537.1|33563636/5-426
LEFRVLSGAQCMARCPAVHG..ARVG.ANPHCDIVLTGEDMPEVAGWLEIDQ...........................S
GWRLAGAVTPGL..................DAQAPCPPAAFNEPVELGAAWITVAAPSAPWPAPPEPCGPDGSDTALHDV
PGSTSPPSVAALMPRRRAGRP..WLALGAAAAVLLVGLATALVSVTTPATPPAAPPPTPTAPLVRAAALIDSLGLTEQLQ
AAYGRGGVLTVTGWVHDETEFARVARALAQLAPRPAMQ...VSRQDEARALACDVLATFGVR..................
........................................................................YMARPYGN
G..RLAISGIASDAHERAAALHAVRMRLPGMTILGRDVRLADEVSAQFAAQLADERLDGVKLSW..HADRLDADPGGLAA
GRMARLRELVAAFNQRN....YDVVRLPATAARATRDHVPFEIRSVV..........................SGPQPYL
MLADGSRLLVG.GLRDQYRLTAIE.SGRLVFDGPEPVIVTR.
>GB|AAS94349.1|46447683/7-597
IILRVFSGPHTGAEVVLPPGD.HVIG.TEDSCDIILSDGGLAPRHVSIGVTAGVPGAPSTVHITPLDGPVRYDDAEVPAT
GVTLAPATPCHIGETCLAWNTPGAPWETFDLTPRQSVTAADAAAGTSAMAGGDPAASTLSANAAASASPSGAAGDAPSGA
SQTPTLSATPANEVDDLVLGSPTRPHHEKRWRSALLAAAVMLLCTSTVVITLETRPPAPPERAAHLAAQLHAAGLTALRV
EARP..EGVVVSGLLDDEAQRIRLWDMARNLLYRVQLE...VAVRSDVLHAVKAAFNSRGIYPEVTFMPAADTTPTTPPL
SAQAMPKAVPGTPDAGTGLAQSPDTATTSMAGTGTAASGVAGTGGNGGNNSDGKSIGGMTAGTVPAGAATLASAPLATPQ
AKAGLRVAGYMRDGVVEAWAFDALREDVPQMPHVTRDLRYASQVAPVLDPLLADAGLKHVQTRY..LSG.VVQLSGDLDA
AQREALDTVLAQTRTRLQVDIPFEVVQSAPAPDKKQQEAPAPVAGRGFTPARQEAAAPAQAEGPQGIDVRSVTLTPLRFV
TTGDGQRIFEGGMLPGGYVVESIS.TTELHLRKDGRSTIYRL
>GB|AAR25803.1|38639337/29-392
WNLCFLSGPMYGRTMSLARGA.NWVG.TAADCEVILPDREIGAKQVCLQVGA...........................L
AVTVQN.................................HGGESGAPVLLNDEPLGSGRRSLTPQDVVTVSS........
...................................IRFGIARHAQASVAVPDDTGAPDVAP.........AAPWLGWLTG
GLRRLGSRRLVIALVALWVGVLLGALGYGFVAWSGRLP...WQHESVLARTHRLQRLLHAYP..................
..........................................................................ELAVAP
RDDGVIVSGYVADPAARERVAQIVSGIDN...AALGTVYVVSDLVATAQTYFSDTALTVAYLGRGRIELTGTAPRAQLEP
RIRNYMKDARPALEVVDHVRDAQADAPRTTTTLGGSAGIPEITTVFAG.........................DGDQRYI
ETVDGSRYFEGARLKEGPTVVSIG.PDEVVFERNGQRITMPL
>GB|CAF24115.1|46400666/161-608
WLLKVIGGPNNGAEFYMQAGHSYILGTDPHTCDIVFHDTSVSRQHAKIAVSLEDTLTIEDLK...............SRN
GVLVSGSPLEIKQN.................LSPSVIVTLGTTSFVVYDREGEMQTIISPLLPSIVKVLQNEEEVAKPKE
ETTIHVSEEMIPPPITPETTISQFGPYVLLAIISGLFLLTGMGIYFLFKSEPVVVNTQENAS...ELVQQAIAPFPAVRY
SFNKNAGNLLLLGHVSNSADKNQLMYNLQGLKFIKHIDDNGIIIDEYVWREINSILSKDPSWR.................
.........................................................................GITVHSP
EAGQFILSGYLETRKQAEKLSDYISVNFPYLDLLKKQVIVEEDVIGQINVWLQTYNLRGVTVKMG..NGGEITLSGNAPS
DKAGEITHLISKIKGLPGVRIVNNYIKADAPEMGIINLSDRYEVTGQS.........................KIGNRYT
IVINGRILSQGDNLDS.MTITSIK.EKVIFLEKDGTKYRIDY