HMM Seed Alignment: TIGR02411

Download Alignment

>GB|CAG77619.1|49650687/44-646
DPSTLSNYE.HFKPTNTTVCLKVDWTDQKLAGSVTYDLTVENSPKN....LVLDTSYLDIQEVQVNG....HKAD.FSIG
ERHNIFGSPLTITLP..PNSGDKLQVKIAYSTTPSCTALQWLTPEQTAGKKAPYFFSQCQAIHARSVMPAFDTPSVKSTF
DIEIESD..HPVVASGLPIK.S..SNDTGKFVFR..QKVPIPAYLFALAGGDLDSAPIGPRSDVYSEPCDLHKCQYEFEA
DTEKFINAAENIVFPYEWEKYDVLVLPPSFPYGGMENPNITFATPTLVSGDRQNVDVIAHELAHSWSGNLVTNCSWEHFW
LNEGWTVYLERRIVG...............ALEGEQQRHFSAIIGWNALEESVKL.MSRDPVQESYTQLVVDLKPNGGAD
PDDAFSSVPYEKGSTFLFFLETEIG.QAKFDPFVKHYFKHFRYKSLDTYQFIDCLFDFYANDKEVTDKLNAIDWEKTLFA
PGLPN.KPKFDTTLADECYSLASRWKDASD........ASAFS.AKDIASFNSSQMVVFLITLSEYEGKD....GFSWAN
KKELISNMGDIYS..LANSSNPEVIAKWYSIAI....LAKVESEYPKLADWLATVGRMKFVRPGYRALNS..VDPKLAKE
TFEKNKDFYHPICRDMVSKDL
>SP|Q10740|LKHA_S.cere/57-669
DQSTLSNYK.DFAVLHTDLNLSVSFEKSAISGSVTFQLKKLHEGKNKSDELHLDTSYLDVQEVHIDG....SKAD.FQIE
QRKEPLGSRLVINN...ASCNDNFTLNIQFRTTDKCTALQWLNSKQTKGGK.PYVFSQLEAIHARSLFPCFDTPSVKSTF
TASIESP..LPVVFSGIRIEDT..SKDTNIYRFE..QKVPIPAYLIGIASGDLSSAPIGPRSTVYTEPFRLKDCQWEFEN
DVEKFIQTAEKIIFEYEWGTYDILVNVDSYPYGGMESPNMTFATPTLIAHDRSNIDVIAHELAHSWSGNLVTNCSWNHFW
LNEGWTVYLERRIIG...............AIHGEPTRHFSALIGWSDLQNSIDS.MK.DP..ERFSTLVQNLNDN..TD
PDDAFSTVPYEKGFNLLFHLETILGGKAEFDPFIRHYFKKFAKKSLDTFQFLDTLYEFYPEKKEILD...SVDWETWLYK
PGMPP.RPHFITALADNVYQLADKWVEMAQHLKTTEDFRSEFN.AIDIKDFNSNQLVLFLETLTQNGHSNKKPKDFDWAK
FPVASRALLDIYQDNIVKSQNAEVVFKMFKFQI....FAKLQEEYKHLADWLGTVGRMKFVRPGYRLLNS..VDRRLALA
TFDKFKDTYHPICKALVKQDL
>GB|CAG85609.1|49653263/18-638
DPCSNSNYK.DFQVLNTELDISVSFDKKIVLGQVTYKLTAKTPNTTS...IVLDTSYLKIIKIRING....LPSDNYELV
KRKEPFGSPLKISLP..TTINKEFELNIEFSTTDKCTALQFIEKEATDGQTAPYLFSQCQAIHARSLFPCFDTPGIKSPY
NMKVKSP..YACLMSGRPKE....TNEEGVYCFH..QPIPIPSYLVALASGDLASAPIGPRSTVYSERVGLSDCQWEFEK
DMENFIQVAEGLIFKYEWLKFDALILPLSFPYGGMENPNITFATPTLISKDRSQVKVMAHELAHSWLGNLVTNCSWEHFW
LNEGWTVYLERRIIGGIAAAEAKSLGEKEAAQYGEKRRHFSAIVGWNSLVDSVKT.LD..P...KYTSLVWNLKEG..SD
PDDAFSRIPYEKGFNFLFYIEQQVGGIKEFDPFIPYYFKKFRYESLDTYQFIDVLYEFFEPRGKAAK.LDAIDWKGWIFG
EGLPPNIPQFDPSLADECYRLVDKWVDFAK...SNSTDISGFNESRDIGNFEPDQHKLFLESLTEKFG........AYSV
SEQIIRKLPSIYP.FYAASTNGEIKSSWNELLIRFGNYNTTDQIVQDFAMWLGTVGRMKFVRPGYKLLQAY.VSKEFAIS
TFTKFESSYHPICKTMVKKDL
>SP|O94544|LKHA_S.pomb/6-608
DPSTQSNYH.DVSISKLDWHARIDFDQELLHGKVSFVIQSARVSQALS.HIILDTSYLEIKNVTIND....IPTP.FRVD
KRRGFLGSALHIVPADEIPSSKSCILTILYSTTKDCTALQFLKPEQTIGGKFPYVFSECQAIHARSFIPCQDTPSVKVPC
TFKIRSK..LPVIASGIPCGTANFCNGSLEYLFE..QKNPIPSYLFCILSGDLASTNIGPRSSVYTEPGNLLACKYEFEH
DMENFMEAAEQLTLPYCWTRYDFVILPPSFPYGGMENPNATFATPTLIAGDRSNVNVIAHELAHSWSGNLVTNESWQCFW
LNEGMTVFLERKILG...............RLYGEPTRQFEAIIGWGELEESVKL.LGEDS...EYTKLIQNLEGR...D
PDDAFSTVPYEKGSNFLYEIERVIGGPSVFEPFLPFYFRKFAKSTVNEVKFKHALYEYFSPLGLASK.LDSIDWDTWYHA
PGMPPVKPHFDTTLADPCYKLAESWTNSAK....NSDDPSKFS.SKDIENWSAGQKSLFLDVVYEAVS...........F
PHNYIKRMGDVYS..FAESKNAELSFRFFKLALK....SKYKPLYNTIAERVGSVGRMKFVRPIFRLLNE..ADRAFAIE
TFEKYKHFYHKICASQVEKDL
>SP|P09960|LKHA_H.sapi/5-607
DTCSLASPASVCRTKHLHLRCSVDFTRRTLTGTAALTVQSQEDNLRS...LVLDTKDLTIEKVVING....QEVK.YALG
ERQSYKGSPMEISLPIALSKNQEIVIEISFETSPKSSALQWLTPEQTSGKEHPYLFSQCQAIHCRAILPCQDTPSVKLTY
TAEVSVPKELVALMSAIRDGETPDPEDPSRKIYKFIQKVPIPCYLIALVVGALESRQIGPRTLVWSEKEQVEKSAYEFS.
ETESMLKIAEDLGGPYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDKSLSNVIAHEISHSWTGNLVTNKTWDHFW
LNEGHTVYLERHICG...............RLFGEKFRHFNALGGWGELQNSVKT.FGETH...PFTKLVVDLTDI...D
PDVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKD..KVDV.LNQVDWNAWLYS
PGLPPIKPNYDMTLTNACIALSQRWITAKE......DDLNSFN.ATDLKDLSSHQLNEFLAQTLQR...........APL
PLGHIKRMQEVYN..FNAINNSEIRFRWLRLCIQ....SKWEDAIPLALKMATEQGRMKFTRPLFKDLAAFDKSHDQAVR
TYQEHKASMHPVTAMLVGKDL
>GB|AAK93169.1|15291801/79-681
DPSSYSQPD.LITTEHSALNWKIDFAATKIQGSVLHRFKVLTANLDK...ILLDVRDINVTNATLLAGGSELPIN.FFIS
DAVDDIGQKLTLELPSGTAKG.SLNVRIDYETSSSASGLQWLNPTQTLGKEHPYMFSQCQAIHARSVIPCQDTPAVKFTY
DATVEHPSELTALMSALID.....KKEPGKTLFK..QEVPIPAYLVAIAIGKLVSRPLGENSSVWAEEAIVDACAEEFS.
ETATMLKTATELCGPYVWKQYDLLVMPPSFPFGGMENPCLTFVTPTLLAGDKSLADVVAHEIAHSWTGNLVTNKNFEHFW
LNEGFTVFVESKIVG...............RMQGAKELDFKMLSNLTDLQECIRTQLNKTP...ELTKLVVDLSNC...G
PDDAFSSVPYIKGSTFLRYLEDLFGGPTVFEPFLRDYLKKYAYKSIETKDFQSALYDYFIDTDKKDK.LSAVDWDLWLKS
EGMPPVIPNFDESLANVTKELASLWSSKSV......AELADS..AEIKTTISIHQLIDFLGKLIESKD........IVDL
NEGKINLLESTYN..LKSSKNAEVRFRLNRLIIR....ARLIKRLDEILEFANSNFRMKFCRPIYRDLAGWPEAKPAAIR
NFVNVKDQMMAVCSHTIEKDL