HMM Seed Alignment: TIGR02320

Download Alignment

>RF|NP_782296.1|28211352/153-434
LRQLLKLRPIVKAIEVHNGITGLIAEKTVV.ERNGELD.QFDAMWISSLCDSTAKGKPDIELVDMSSRLDTVNDVMEVT.
TKPIILDGDTG.GLVEHFVYNVRTLERMGVSAVIIEDKTGLKKNSLFGTEVQQTQDTVENFCYKISEAKEVLRTDEFMII
ARIESLILEQGMEDALNRAYAYVNAGADGIMIHSRKKDPTEIFKFCDEFRKTDKNIPIVVVPTSFNTVTEEEFIAHGVNV
VIYANQLTRSAFPAMQQTATKILECHRAKEVDDNLMSIKDIITLID...
>GB|BAA32495.1|1754529/150-434
LRRLLDSKDIVRILEVHNGLTGLIIENSKV.TVDNQAR.EFDGMWSSSLTDSLARGKPDTEAVDVSSRLQMVNELFEVT.
TKPLVFDGDTG.GKPEHFGFTVRSLERLGVSAVIVEDKEGLKRNSLFGTDVPQTQSSVEDFSERIRIGKRAQITDDFMVI
ARIESLILEKGMADAVHRAEAYVDAGADGIMIHSRQSDPAEIFEFCRYFDKLPRRVPLVVVPTSYSSVRESELADAGVNM
VIYANHLMRAVYPQVTKVVQSILQHGRAHEAESMLASIKDALSIIPENA
>RF|YP_211531.1|60681387/149-433
LRRLIQAKPVVRILEAHDGLCGLIIENLEV.QKGDKRE.VFDGMWSSSLTDSTSKGKPDIEAVDLTTRLQDLNNILECT.
TKPIIFDGDTG.GKIEHFVFTVRTLERHGISAVIIEDKVGLKKNSLFGTDAIQTQDSIEGFCDKIRAGKNAQVTGDFMII
ARIESLIAGKPMSDALERAYAYVQAGADGIMIHSKDKSGEDIREFCRTFRKEYAHVPIVVVPTTYDHVHESELHEWGANV
VIYANHLLRAAYPAMMNVARTILENERAEEVRPLCMPIKEILELIPGTK
>RF|YP_048605.1|50119438/26-310
LRELLQQQKGIRVMEAHSPLSALLIEQAAY.ED.GDIHYQFDAFWSSSLTDSTLRGKPDTELVDISHRFHAITEIFDVT.
TRPLIFDGDTG.GQTEHLAHHIRAAENLGISAMIIEDKTGLKKNSLFGNDVKQTQASVADFCEKITTAKKAQLTPEFMLI
ARIESLILDVGMEDAINRALHYADAGADGIMIHSRHKNPSEILTFARQFRDHYPHLPLVCVPTSFNDITFDQLIDGGFNI
VIYANHMLRAAYPAMKSILPEILKHGRTLEVEDKCMSIKDILDLIPGTR
>RF|YP_204632.1|59711856/18-304
LINVIKSHGCIRILETHNPISALIAEKASAnDIDSEENVEYQGFWSSSLTDSVSQGKPDIELLDIKNRISNISDIFEVT.
SKPLIIDGDTG.GKIEHLSFNIRSLERLGVSAIIIEDKTGLKKNSLLGNEVEQKQDTIESFCTKIKKGKESQLTEEFMII
ARVESLILDAGMEDALERAFAYSESGADGIMIHSRHQDGKEIFDFAKQYRSKYPDKILVCVPTSYNEIKFDELKQAGFNI
VIYANHMLRAAYKAMEYTSEQILKNGRTSEIESHFLSIKRMLDLVPGTR
>RF|YP_110631.1|53721646/20-303
FKEKLATGRALRFIESHSPISAMISEKVYV.AHGASQS.EFDGFWSSSLTDSTLRGRPDIEILDIASRLANVQHIFDVT.
TKPLIIDGDTG.GKPEHFALNVQSLERSGVSAVIIEDKTGLKKNSLLGNDVIQHQESIEDFCEKIRVGKAAQITDDFQII
ARVESLILDKGMPDALARAAAYCEAGADGVMIHSRKKDADEVIEFAQRFRACRRDAYLVCVPTSFNAISFSELARH.FSV
VIYANHLLRAAYPAMLAVAEGILAHGRTLEIEERCLPVNEILKLIPGTA
>RF|YP_609447.1|104782949/12-296
LRQLFHDKPCLRVLEAHSPISAMLAQSVRL.EVRGASL.GYDAIWSSSLTDSTQRCLPDIEILSPSDRLERLNEILGVC.
DLPLIYDADTG.GKVEHFAIHVQWLARAGVSAIVIEDKCGLKKNSLLGLSVHQEQETVEHFCEKIRAGTQHRHGDRMMIF
ARCESLILEKGLEDALARCSAYTEAGADGIMIHSRKRSGEEILEFARRFKHRHPATPLICVPTSYPQLTFSCLADAGFNA
VIYANHMLRGAYSAMRQVATSILENDRAYEIEPACMPIDEILSLVPGTR
>RF|YP_259248.1|70729510/11-296
LSQLLRRKRCLRVLEAHSPISALLAEQSRL.ERGSGPSLVYDAIWSSSLTDSTHKGLPDIEILSPSNRLHGIREIFDVC.
SLPMIFDGDTG.GKAEHFAIHVKMLDRAGVSAVVIEDKCGLKKNSLFGNAVSQLQDSIEEFCEKIRVGCANRSHEDLLII
ARCESLILDKGMDDAIERCLAYVAAGADGIMIHSRKKDGLEILEFARLFRRHCPRVPLICVPTSYAHLSFDELEGAGFNA
VIYANHMLRSAYMAMRDVAVGILEHGRTLEVEPRCLGIDEILDLVPGTR
>RF|YP_343345.1|77164820/22-294
LRALLKSEPTEFLLEAHNGLSARIAEEA...........GFKGVWASGLAISSQFGVRDNNEASWTQIVDMLEFMSDTT.
TIPILLDGDTGYGNFNNLRRLVRKLEQREIAGVCIEDKVFPKTNSFIGGE.RQPLAEVDEFCGKIKAGKDSQSDPDFSIV
ARVEALIAGWGLDEALRRAEAYHRAGADAILIHSKLSQADEILAFAREWGN...RAPLIIVPTKYYSTPTEVFRKAGIST
VIWANHLIRAAAAAMAQVAREIHDTQTLVNIEDQVAPVSEIFRLQGAEE
>RF|YP_356057.1|77918242/8-280
FKSLLHSPDVQFLMEAHNGLSAKIVEEA...........GFKGIWGSGLAISAALGVRDNNEASWTQVLDVVEFMSDAS.
SIPIMLDADTGYGNFNNVRRLVRKLEQRGVGAVCIEDKLFPKNNSLLDDA.RQPLEAIDVFAGKIKAAKDTQQDEDFCVI
ARIEAFIAKWGLGEALKRAEAYHKAGADALLIHSKLSTAEEILAFMNEWQD...TCPIVVVPTKYYTTPTSVFQEAGISL
VIWANQLLRSSVAAMQKTAAIIHEQQSLLGVEKEITPVKEVFRLQNTDE
>SP|P56839|PEPM_MYTED/10-282
LKQMLNSKDLEFIMEAHNGLSARIVQEA...........GFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDAS.
DVPILLDADTGYGNFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGR.AQPLADIEEFALKIKACKDSQTDPDFCIV
ARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWNN...QGPVVIVPTKYYKTPTDHFRDMGVSM
VIWANHNLRASVSAIQQTTKQIYDDQSLVNVEDKIVSVKEIFRLQRDDE
>GB|CAC93955.1|19171192/14-287
LKSMLRSKELSFLMEAHNGLSARIVEET...........GFKAIWASGLSISAQMGFRDNNEASWTQVCDVAEQMSDAT.
SIPILLDADTGYGNFNNARLLVRKLEKNGVAGACVEDKLFPKTNSLLDERGAQPLADVKEFALKIRAMKDTQTDENFCVV
ARVESFIAGWPLEEALKRATAYAEAGADAVLIHSKKKDSSEIDAFMAHWDN...KTPVVIVPTSYASVPCTHFREIGIST
VIWANHNLRACIAAMQASTRMIFEQESVVAVGKNIAPVKEVFRLQRLPE
>RF|YP_562170.1|91792519/14-285
LKDILLSPTTEYLMEAHNAISAKIIEEV...........GFSGIWASGLTISSSLGVRDRNEISWTQVIDAVEYMTDVV.
DCPILLDVDTGYGDYNSFRRVVKKLCQRNISGCCIEDKIFPKQNSFIGER..QELASIAEFTGKIKAGIDHRENEDFVII
ARTEALISGYGIDEALRRAEAYYEAGADAILIHSKSSNADEVLEFCNLFTA...PCPIVIVPTKYYNTPTNVFEEAGVST
VIWANHSLRASVKAIRETAEIVFKEKSLVSVENKVASLAEIFRLNGEHE
>RF|YP_533719.1|90425349/14-285
LRELLHNGSLSFAMEAHNGLSAIIAEKA...........GFEVIWASGLAISASLGLRDSNEATWCQVLTIAEFMADAV.
EIPIILDGDSGHGNFNTVRRLVRKACDRRIAGVCLEDKLFPKMNSFIQSG..QILANVDEFAGRIMAAKDTQTSAAFTVI
ARTEALIAGRSLAEALDRASTYASAGADAIVIHSAKSTADEVLAFADAWAN...RCPLIIIPTKYYTTPTQLFRQARISL
AIWANHSLRASVASMQAVCSRIVREQSVKGVEPSISKLETIFDLLKYDE
>SP|P29247|PEPM_STRHY/22-294
LRYLLHAPGACQLMGVHDGLSARIAVAE...........GFEALWASGLCMSTARGVRDSDEASWTELLTLVGTMTDAVp
GVPVLVDGDTGYGNFNTARRFAGRAERVGAAGVCFEDKVFPKMNSFFGDG..HQLAPVAEFCGKIRACKDAQRDPDFVVV
ARTEALISKLPMEEALDRAAAYAEAGADALFIHSRMNTPQQIATFMERWEG...STPVLIAPTTYHTPSVDDFAALGIAG
CIWANHSMRAAFAAMRDVCQRIRTDRGIYGIEDQVAPLKEIFGLFDYEG