HMM Seed Alignment: TIGR02273

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>SP|Q886V1|RIMM_PSESM/11-179
LIVIGKIYSVHGVRGEVKVYSFTDPIGNLLDYKTWTLRREGS...VE...KQVELVSGRLQSK.FLVVKLKGLDDREEAR
LLSGYEICVPRNLFP..DLD...DGEYYWYQLEGLKVI..DQLG..QLLGKIDHLLETGSNDVMVVKPC...AGSLDDRE
RLLPYTE.QCVLAIDMAAGEMKVEWDADF
>SP|Q83E84|RIMM_COXBU/6-168
KVIIGRLARPYGLRGWIKVVSFTHPIDNLLNHPTWQIQHN.N...EW...QPLKLQAGKLHEP.FLVVKLENIDDPETAK
HYTNDLIAIERGALG..ALK...EGDYYWTDLIGLAVV..NTHG..IELGTVDSLIETGSNDVLVVR........SKERE
RLIPYTS.YTIQSIDLEKKIIVVEWDADF
>SP|P21504|RIMM_ECOLI/13-182
PIVLGKMGSSYGIRGWLRVFSSTEDAESIFDYQPWFIQKAG....QW...QQVQLESWKHHNQ.DMIIKLKGVDDRDAAN
LLTNCEIVVDSSQLP..QLE...EGDYYWKDLMGCQVV..TTEG..YDLGKVVDMMETGSNDVLVIKANL..KDAFGIKE
RLVPFLDGQVIKKVDLTTRSIEVDWDPGF
>SP|Q8EH71|RIMM_SHEON/8-177
PVVLGKLGSCHGIKGWLKITAYTDSVEGIFDYSPWLIKENG....EW...REVKVIQWRYQGK.AVVAELEGVTTRERAQ
MLTNCEIGILPQQMN..ALP...EDEFYWRDLIGCEVI..NTTG..YNMGIVDQIVETGSNDVLLVKANA..KDSFGKVE
RMVPFVPGQFILKVDVQGKQILVDWDPDF
>SP|Q8K9F5|RIMM_BUCAP/11-175
PILIGKIGKAYGILGWVKFFSFTENKEKIFSYFPWFILKK.....KW...EIIHVDKWKKHNN.NFIIHIENILDRSTVS
KFTNLEIFIDKSILP..ILK...EDEYYWNDVIDCKVF..NSRK..EYLGKVINLIRNQNNDVLIIRNN...LKKNNFKK
IMIPFIHKKIVKYINVKHKIITVIWN...
>SP|Q7VQF9|RIMM_CANBF/13-184
PIVIGRIKGAYGILGWVKILSFTEKIEDIFVYNPWFIFFRS....KW...KVIKLEYWRLMNNKNYIVKFFNVSDRNHAM
ALSQHNLVVESIQFP..KLYN..KDEYYWKDIIGCKIM..TING..KCLGRVISIIDTKAHDILVVRSEE..YGFTKYVD
CLIPFILKKIIKDVDLIKNIVVVDWEIYK
>SP|Q8PBC2|RIMM_XANCP/7-170
RILLGRIVGAFGVKGELKLESWTEPRSAIFRYQPWIVRTPSG...QE...SVLSGVRGRDQGK.NLIAVFPDITDRDTVE
AMHGTEIYVARSALP..PPK...PDEYYWVDLEGLQVE..TVEG..VKLGTVSHLFSTGSNDVVVVRGD.........RE
RMIPFVLPEYVKSVDFEANLIVVDWDPDF
>SP|Q9JVK9|RIMM_NEIMA/7-169
RVAMGYIKGVFGIKGWLKIAANTEYSDSLLDYPEWHLVKDGK...TI...SVTLEAGKVVNS..ELQVKFEGINDRDLAF
SLHGYTIEIPREAFA..PTE...EDEYYWTDLVGMTVV..NKDH..TVLGKVSNLMETGANDVLMI........DGEHGQ
ILIPFVS.QYIETVDTGSKIITADWGLDY
>SP|Q82U37|RIMM_NITEU/1-169
MVVLGRIAGPHGIRGQIKVIPFTEYVDGLMEYPVWCLSRDEK...NW...QIVRPATFFIHDN.LLIVTLTGYSDRTSAS
ELKGLLVAVPRSQLP..PLSKDGEDGYYWTDLIGISVV..NMQG..EPLGTVAGLFETGANDVLRVRL......SGSSKD
ELIPFVD.QVIRQVDLESRQITVDWELGY
>SP|Q97I95|RIMM_CLOAB/4-163
FFSIGQIINTHGVRGELKIYPLTDDI.NRFDDLDSVYVDN..........EIKKVISVKKQPN.KLILKLEGIDTLDEAV
KYKNKYIKVLREDAV..ELK...EGQYFIKDIIGCNVF..DEND..KDLGEVYDVISTKNNDVYCIR.......KEGQQD
ILVPALK.DIVLKIEIENKKIVIKAVEEW
>SP|Q8XJP6|RIMM_CLOPE/4-161
LLVVGQIINTHGLRGEMKVMPLTEDM.RRFDYLEYVILKG..........KKVKVEGVKYFKD.KVILKLEGINSIEEAE
KLKRTYLEIEREDAI..ELE...EDEYFIVDLVGCTVV..DTEG..FEYGKIKDVIQTPSNDVYWVQ.........GKKE
VLVPVLK.DIVLDINMDEKLITIRPSGEW
>SP|Q9X1Q4|RIMM_THEMA/12-176
RVAIGKIVNTHGLKGEVKFFPYTNSE.EIVKNLSSVVLYNSEKK.AF...YNLTVESVRRMNK.LFLIRFKSIDTIEAAE
RIKGCEVFIKYEELP..KLS...EDEYYFYEILDCDVF..YESG..ENVGKVVDIIETGSNDVLVVR.......K.KKKE
TLIPMTK.DCIVEIDKGAKKIIAKEMEWI
>SP|O67156|RIMM_AQUAE/5-165
YVVIGKVLDTFGLEGELKVRPYAPP..EVFENLEKVYLKR.KGG.DW...VPFEVEWVDFIDD.KVIIKFKGYDSIDEVE
QFKGAKLFLPKEELP..ELG...EEEYYAYELVGMEVE..TDKG..KKLGKVERVQDMGPYDALVLD.......K.EN..
LLVPFVS.DIVLKVDKENKKIIVKEELLP
>SP|Q9KA14|RIMM_BACHD/4-171
WLNVGKIVNTHGVRGEVRVLSTTDFEDDRFSSGKTLYVMRPNQN.ER...VAVTVASHRKHKN.FDLLCFEGYPSINDVE
AFKGGRLQVPIEDRP..ELG...EGEFFYHEIIGCSVV..TIAG..EELGKVKEILSPGANDVWVVQC......RRGGKD
LLIPYIE.QVVKQVDLEKQQITIEPMEGL
>SP|Q8DQG3|RIMM_STRR6/3-168
YFNVGKIVNTQGLQGEMRVLSVTDFAEERFKKGAELALFDEKDQ.FV...QTVTIASHRKQKN.FDIIKFKDMYHINTIE
KYKGYSLKVAEEDLN..DLD...DGEFYYHEIIGLEVY..E.GD..SLVGTIKEILQPGANDVWVVK.......RKGKRD
LLLPYIP.PVVLNVDIPNKRVDVEILEGL
>SP|Q8R9X3|RIMM_THETN/4-168
YYNVGKVTSPHGIRGEIKVYPLTNVP.ERFYDIPYIWVFDEKDI.PC...KYEIENVKITSKG.MVLLKLKGIDSRNDAE
KLKGLFLKVDAENAL..KLE...EDEYFITDLIGMKVY..TEEG..ELIGTLEEVLQTGANDVYVVKA......KE..RE
VLLPAIK.EVIKKVDVEGKVMIVRLLEGL
>SP|O33016|RIMM_MYCLE/9-176
ELTIGRVVKAHGIGGEVVVEIRTDDPASRFCPGNILRAKDFPRG.GPERRYTVVYAREHGAR...LLVRLAGVSDRDAAD
ALRGSLFVIDSLDLP.PIDE...PDTYYDHQLEGLQVR..TMMG..RDVGVVAEVLHTAAGELLAV.R......CDS.GE
VLVPFVG.AIVKLVSLDDGIVEIDPPKGL
>SP|Q82JW2|RIMM_STRAW/2-166
QLVVARIGRAHGIKGEVTVEVRTDEPELRLGPGAVL.ATDPASV.GP...LTIETGRVHSGR...LLLRFEGVRDRNGAE
ALRNTLLIAEVDPDE.VPED...PDEYYDHQLMDLDVV..TKDG..TEVGRITEISHLPSQDLFVVER......SDG.SE
VYIPFVE.EIVVEIDLEEQRAVIDPPPGL
>SP|Q89X39|RIMM_BRAJA/4-165
LVCVARIGAAHGVRGAVKLWTFTEDPFAIKRYGPLLSKDGK....RQ...FEVAQARE..AKD.HLVATFKGVTTRDEAE
RLNGIELYVAREKLP..ATD...EDEYYHTDLIGLAA..VTTDG..EPLGRVLAIHNFGAGDIIEIAP......PKG.AS
LLLPFSN.AVVPEVDVAGGRVVVALPQEI
>SP|Q9A2B4|RIMM_CAUCR/9-171
LILVGRVAGGFGVRGEVRITTYTEDPLSIAGFKALKRQDGS....PA...LTIASARK..TKD.GVVCRCPGVETKEAAD
ALRGLRLYVPRSALP..EPD...DDEFYLTDLVGLTVRHIQTD...QLLGRVKSVQNFGAGDILEITP......DLGGPT
WYLPFTR.AAVPEVRVSEG.LILADPPAL
>SP|Q8UBZ8|RIMM_AGRT5/7-168
PILMAKIGGAQGLRGEVRVSTYTDDPMALGDYGNLVTADG.....RV...FEILEVRE..GKN.VVVVRFRGINDRNAAE
SLNGLELFIERDNLPDDELD...DDEFYYADLEGLEA..VDAEG..KSYGAVSAVYDFGAGDLLELKG.......AGRRP
ALIPFSE.AAVLEIDLEAG.RILIDPMAA
>SP|Q7V4K0|RIMM_PROMM/7-173
WLTVGKVVAAQGMQGELRINPSSDFPERFTLPGQRWLKERNGEP.RP...IELLTGRQLPGRS.LYVVKFAGVNNRNAAE
ALVGQKLLVPSSDRP..SLA...EGEFHLLDLVGLEAR.LQAEG..PAIGHVIDLTTAGN.DLLEIEL......LTG.RR
VLVPFVE.AIVPEVQLNQGWLRLTPPPGL
>SP|Q7UZQ3|RIMM_PROMP/7-176
WLIVGLITSPQGINGKIKIKSLSDFEERFTKPGKRWIQKGNETP.IE...FELTHGFKKPGKE.SFIITFKGINNRTQAE
NLKGQKILVKVDAIP..KLS...HGEYHLTELINLNVK.ISENNQLHIIGKVINLSNEKN.NLLVIQL......LKNNKE
VLIPFVK.EIVPIVDIKKNFILLTPPSGL
>SP|Q9ZK65|RIMM_HELPJ/1-176
MLLVGRIGKSVGLNGGLKLHLESDFPECLKKGVKVSVAPINAFSCAS....SFKDYVIHSYEHAKNLLFLETIRTPEKAK
ELTNLGLFMSEAESK..KLCVLKEGEFFYCDLIGLSVV...EGN..EILGKVIEIQRISQTDYFMVETTRSLVEKGLAKI
FLIPYRD.FYIQEILLQDKKITTHNAKT.
>SP|Q9PPJ5|RIMM_CAMJE/6-174
FVQVAKLGKTVGLKGYVKLHNLSDFSSQFKKDATFFIK.......N.....TKEMLKIKHYNANNSTVLFENYEDIEKAK
ELTNLILFQSIEKSR..QTCKLKKDEFFYFDILECEVF...EED..KRLGKVVDILETGASYLFEIQSDEKWVEKKYPKI
FFIPYLD.KFVKNIDIEKRQIFCTQDAFL
>SP|Q92IE7|RIMM_RICCN/7-165
LILVGVIKSCHGIKGHVMLKSFTDPATKILERNLVNESGAN.........IHIKLISQNAKG..ELICTFNDIATRNEAE
NLKGYKIFCLRASLP..ELE...EDEFYIADLTHLPVL..NQDH..KEIGKIKNILNFGAGDIIEIEFS.......NQTT
ELLPFNK.EFFPIITKDYVILNYQREA..
>SP|Q8KD89|RIMM_CHLTE/3-166
LFLTGVVLKPKGLKGELKVKPVTDFPESFLTRREYYIGKTP...ED....AVLRKVQSARFHQGFAWLVFEGAGSREGAE
ALVGCGLYVTRDALV..AMP...DDRAYIHELIGLDVFD.ETEG...RVGKISDVLQMPAHDVYEVDT........GDRK
VLIPAVE.DFITETDLEKGMVRLKRFKEF
>SP|Q9RSW1|RIMM_DEIRA/12-174
ATRLGHLLGPHGVQGGIKLYVLGDPAQVLALKRVYVESRG.........WLSLRRAEGMPPN...LVLYLAGVSSREGAE
ELRGLQVYATDAELP..DLE...EGTFYYHDLRGLEVY..GAGG..ERLGTVSDVMDAGHQDLLVVDYG....GGTSFVP
LQAPYVE.VPLAGGKPGAVHLTADAPAGL
>SP|Q8A682|RIMM_BACTN/7-170
VYKIGLFNKPHGIHGELQFTFTDDIFDRVDCDYLICLLDG........IFVPFFIEEYRFRSDSTALVKLEGIDTAERAR
MFTNVEVYFPVKHAE..EAE...DGELSWNFFVGFRMED.VRHG...ELGEVVEVDTATVNTLFVVE.......QEDGEE
LLVPAQE.EFIVEINQEKKLITVELPEGL
>SP|Q8RGK8|RIMM_FUSNN/3-166
LLIAGKVLGSHNLKGEVKVISDLDNIEVLVGNKVILELADSQ...Q..KLLTIKKIEHLVAN..KWIFSFEEIKNKQDTI
EIRNANIKVRRDIVG...IG...EDEYLVSDMIGFKVY..DVKGD.EYLGEITEIMDTAAHDIYVIES........EEFE
TMIPDVD.VFIKNIDFENRKMLVDTIEGM
>SP|O51640|RIMM_BORBU/1-165
MFIKGVILSSYGVNGYARVKSISNNFCDFINLKNNKVLLKKSNSSS....VEVKVVDVNIKGN.SLFLKFEEIDTPEAVR
PLIGFELWVDDSLAS..SLK...EGEYYLGKLIGYAIVN...NN..KKLGEVVAFFEYLNSVFLEVR........VGIKF
FFIPFLS.IYIGDINTQEKTIELKVLDLL