HMM Seed Alignment: TIGR02164
Download Alignment>OMNI|VC1692/1-820
......MAITRRSFLKGVATTSAASIIGPSLLTSVSAQAAETTG......TWKVSGSHWGAFRAHIYGGKVQELKALELD
THPTEMLNGIQGILYSPSRVRYPMVRLDWLKK.HKYSAETRGNNRFIRVTWDEAIDLFYRELERVQKQYGPWALHAGQTG
WNQTGAFHNCTAMMQRAVGMHGNYITKVGDYSTGAGQTIMPYVLGSTEVYAQGTSWSEILDNSDNIILWANDPVKNLQVG
WNCETHQSFGYLDQLKEKVAKGEINVVSVDPVKNKTQRFLQND...HLYINPQTDVAFMLALAHVLYTENLYDKKFIETY
CLGFEEFIPYVLGKSKDKVEKTPEWAATICGVKPDAIRDFARMLVNGRTQLLFGWCIQRQEHGEQPYWMGAVLAAMIGQI
GLPGGGISYGHHYSGIGVPSTGFAGPGGFPRNLDQGAKPKWDNNDFNGYSRTIPVARWIDAILEPGKKINHNGNTVTLPG
FKMMVISGCNPWHHHQDRNKMKRAFQKLETVVTIDFSWTATCRFSDIVLPACTQWERNDIDSYGSYSGKGLIAMHRLVDP
LFQSRTDFEIMTELTRRFGREKEYTRGMDEMEWVRSLYDECKKANEGK.FAMPEFEEFWEKG.FLDFGTGTPWVRHADFR
KDPEINALGTPSGFIEITSRKIGRYGYEHCQEHPMWFEKTERSHGGPGSDKHPFWLQSCHPDKRLHSQMCEAEAFRATYA
VQGREPVYINPLDAKAKGIKDGDLVRVFNDRGQLLAGAVLSDSYPRGVIRIEEGAWYGPLT........EKVGAICTYGD
PNTLTLDLGTSELAQATSANTCIVDFEKFRGEVPPVTSFGGPIEVI.............
>SP|O87948|TORA_S.mass/1-829
........MNRRDFLKGIASSSFVVLGGSSVLTPLNALAKAGINE....DEWLTTGSHFGAFKMKRKNGVIAEVKPFDLD
KYPTDMINGIRGMVYNPSRVRYPMVRLDFLLKGHKSNTHQRGDFRFVRVTWDKALTLFKHSLDEVQTQYGPSGLHAGQTG
WRATGQLHSSTSHMQRAVGMHGNYVKKIGDYSTGAGQTILPYVLGSTEVYAQGTSWPLILEHSDTIVLWSNDPYKNLQVG
WNAETHESFAYLAQLKEKVKQGKIRVISIDPVVTKTQAYLGCE...QLYVNPQTDVTLMLAIAHEMISKKLYDDKFIQGY
SLGFEEFVPYVMG.TKDGVAKTPEWAAPICGVEAHVIRDLAKTLVKGRTQFMMGWCIQRQQHGEQPYWMAAVLATMIGQI
GLPGGGISYGHHYSSIGVPSSGAAAPGAFPRNLDENQKPLFDSSDFKGASSTIPVARWIDAILEPGKTIDANGSKVVYPD
IKMMIFSGNNPWNHHQDRNRMKQAFHKLECVVTVDVNWTATCRFSDIVLPACTTYERNDIDVYGAYANRGILAMQKMVEP
LFDSLSDFEIFTRFAAVLGKEKEYTRNMGEMEWLETLYNECKAANAGK.FEMPDFATFWKQG.YVHFGDGEVWTRHADFR
NDPEINPLGTPSGLIEIFSRKIDQFGYDDCKGHPTWMEKTERSHGGPGSDKHPIWLQSCHPDKRLHSQMCESREYRETYA
VNGREPVYISPVDAKARGIKDGDIVRVFNDRGQLLAGAVVSDNFPKGIVRIHEGAWYGPVGKDGSTEGGAEVGALCSYGD
PNTLTLDIGTSKLAQACSAYTCLVEFEKYQGKVPKVSSFDGPIEVEI............
>GB|AAK03877.1|12722213/1-823
......MKQSRRQFLKNMS.AMAATFAMPNFLIAQNAFAQSAENV....SEWKITGSHWGAIRAKVQNGKVVDVKPFEYD
QYPTEMIKGIKDLIYSEARIRYPMVRLDWLKKRHNSNTAQRGDNRFVRVTWDEALDLFYEELERIQQNYGPWALHTGNVG
WRSTGQFHSCGNHMIRAVGMHGNSVSTSGDYSTGAGQVILPYVLGSTEVYSQGTSWEIILKESENIIFWASDPVKNLQVG
WNCETHEAYKYLEQLKAKVAAKDVNVICVDPVKSKTQNYLGCD...FQYINPQTDVAFMLALAHTLYVENLYDKKFIEMY
TVGFEKFLPYLLGESEDKVVKDAEWAAKICAIQAEDIRQFARMLAGKRTQLIFGWAIQRQQHGEQPYWMGTVLAAMLGQI
GLAGGGISYAHHYSSIGIPSSGAAMPGAFPLNLDEGQKPKYDNKNYNGYSAVIPCARITDSLLQPGETIDHNGQKITYAP
YKMAIFTGCNHWHRHSERNKMKQAFQRLETIVSINYSWTATCRFSDIVLPACTPFERNDIDAYGSYSNRGVIAMQKLVDP
LYDSRSDFEIFKDLCRRFGKEKEYCRNMDEMEWVKHLYEACRQENQGK.FDMPPFAEFWQKG.YVLFPEGEPWVRHADFR
EDPELHALGTPSGFIEIFSNKIASYGYADCKGHPMWFEKAERSHGGPKSDKYPFWLQSAHPDKRLHSQLCESKALRETYA
IQDREPLFINPEDAKRLGIVHGDLVRVYNDRGQAIVGAHVSDNFPQGVLRLQEGAWYSPLD........EKVGSIDTYGD
PNTMSLDIGSSSLAQAVSANTCLVNIEKFVGQAPAVTGFHGPHEVAL............
>SP|P33225|TORA_E.coli/1-848
MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAATDAVISKEGILTGSHWGAIRATVKDGRFVAAKPFELD
KYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLT.ASG
WQSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQAN
WWCPDHDVYEYYAQLKAKVAAGEIEVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLALAHTLYSENLYDKNFLANY
CVGFEQFLPYLLG.EKDGQPKDAAWAEKLTGIDAETIRGLARQMAANRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQI
GLPGGGFGFGWHYNGAGTPGRKGVILSGFSG..STSIPPVHDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPP
LKMCIFAGTNPFHRHQQINRIIEGLRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPP
QFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHLPAFDDFWNNKEYVEFDHPQMFVRHQAFR
EDPDLEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYT
VAGKEPVFINPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDK..G.....GEPGALCKYGN
PNVLTIDIGTSQLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEYVPASQVKS