HMM Seed Alignment: TIGR02145
Download Alignment>ORF03548/101-285
VLVDSRDNSEYKTIGIG......NQVWMAENLNYEV........EPS........WCYGDSLEYCEKYGRLYQWDGILGA
S..............AKVEN.......VCPEGFHVPSNKEWDELNAFVNLWFHG.............NSYSARKVLLSSD
PKEFDNIVHVGDDLVGFTGIYAGH..........RTANGF.......FTGR...........LTSAYFCSADMNEE...G
.SAYIYMLR....QDEFDLTKYAQKTTS...NCNVRCVKD
>ORF04524/59-250
TFTDARDGETYRTIQIG......NQVWMAENLRFKT........EGS........YAPNNEESNVAKFGRLYTWTKALDI
PDEYAEQSTAKDIEMHNKIKDK.NYKGIAPEGWHIPSNKEWEQLLSNLDAKSDG.............GELRGKFMWKNK.
..........GKDTFGFFALPAGY..........RFDNGN.......FCHF...........SRRARFWSKDEYGK...A
.NAFRLSIT....NNSVDIEGVYR..SD...ALSIRCVKN
>ORF02690/184-367
SFTDPRDGQVYRIIKVE......GREWFAQNVNYNV........EGHS.......WCYEDKDSYCARSGRLYDLEGAR..
...............KA...........CPEGWHLPRDREWSDMLKGLTGCYDGVDKCGN.....FATKMKATTGWQGGG
..........GTDEYGFTIFSSGY..........RKVLGKATI...RYEDM...........GEYAGFWSAQNGRN...E
.TIWLWAMG....RMSDQMVRQLVPATAKNNGYSVRCING
>ORF00641/45-246
KIIDPRDNNSYGVALIG......DLYWMTENLRYAD........SVSTKNLAGNTWCHEDDAK.CEKYGRLYSWTAALDY
DKKFN.........SASVGYVS.STKGICPNGWRIPSGNDWLSLVNYVETNNGGEGS.........GTSLKSTETWSASD
EVR......KPTNRFGFGAKASGR..........RNNDGE......TFMST...........GRIAFFWSSNEHDN...G
.TAEGWQLR....HDVGVIQLGNFYKDH...GLAVRCVAN
>ORF01655/294-464
TMTDPRDGKTYRTVKIG......DQVWMAENLNYET........EKSY........CYNDSVEYCAMYGRFYEWNAAMR.
...........................ACPEGWHLPLLEEFKTLVDALGD...SAM.........AGSKLKSTSGWLNDL
N.........GTDDYGFTVLPIGG..........RS..ASG......KYIN..........KEWLADFWSSTESAV...E
.FAYVMHVG..ANFNTAPLDMD.EGK...YNAFSVRCLQG
>ORF03178/452-655
SVVDSRDGQTYKTTKIG......NQVWMAENLNYKT........AGSF........CYHDSTQYCELYGRFYTWASAMDS
VGAFSVNGKGCGSGTSCPPNFP..VRGVCPEGFHLPTLAEWKSLVATAGG...EYD.........AASKLMSAKKLEKGF
DWVE.....EGTDDYGFSAYPSCN..........ME..RDG......TSGF..........CNPPVNYWSSIESST...D
.EAYHMSLQNSNNYNGKGIQFSGIEK...HHAFTIRCVKD
>ORF03884/33-211
SLNDSRDGQIYNIVKIG......DQVWMAENLKYEIPVAAGEE.PKSF........CYSDSEINCGIYGRLYTWDNAAN.
...........................ICPEGWHLPDTTEWNKLFDAVGG...KHI.........AGKKLKAVSNKWLVN
S.........GTDEFGFGALPAGF..........KKTILDA......YFFD..........LGSYGNFWTDVQSAG...S
.HAYHVTVF....YDKDSVKYIEDPK...DFALSVRCLKN
>ORF03177/903-1080
SLVDNRDGQVYKTVKIG......SQTWMAQNLNYET........NDSR........CYKNDYHNCSKYGHFYTWIDAEK.
...........................ACPAGWHLPDTTEWNTLFASVGGRPTASKYLKS.....KSGWKTCKNWCWANG
N.........GSDDYDFSALPVAS..........WGERSE.......FGSE...........GEGAVFWTASKEDR...N
..AYYIYLV..AKYSYTIYFNKNYDN...YSRRSVRCVKD
>ORF03177/701-882
.LIDRRDGQTYRTVTIG......EQTWMAENLKYKT........EFST........CHK.DPDSCAKYGRLYEWGEAYN.
...........................ACPADWHLPTEEDWNTLFATIGAKYRKYDGFLG.....AGEKLKSKSGWLGNG
N.........GTDEYGFSALPAGT..........SNYYSE.......VIQSPDV...HQG.VGEKAYFWSVSVNPS...F
..SNAYLIM..ESGTKRAYFAVGRD....YDAISVRCVKN
>ORF00795/24-211
SFTDSRDGQSYDVVKIG......DLTWMAENLNFET........VGSF........CPEGDSRNCKRLGRLYSWAEAKT.
...........................VCPEGWRLPTNEDFAQVLAQSHDGDSGAVSNK......VGAKLKSRDGWFKKG
N.........GTDDFGFNALPAGY..........RGAVSK.......ADDGAVAGGKFNG.IGGYAYFWSATEDPE...N
PESNAFYLF..LSFSSDAASLNSFAK...EDYRSVRCVR.
>ORF01973/153-346
.FTDPRDGQKYPVVVIG......SRVWMAANLNYKT........AESH........CHGDYEHNCEKYGRLYSWKDAED.
...........................ACPEGWDIPSYAEWVALNKFIGEEYYGVNDFFAFP...SAKMLISVTGWDYTK
Y.........GIDAFGFSVLPAGK..........GYYIPPRYVGGKLIYEERTVYEDHKGDKSERAYFWSSSQVNG...N
..ENKMYVE..HGPAMDLYPES...K...EMWLSVRCIKD
>ORF02322/42-209
EIKDARDKQKYRTVVID......GRKWMADNLNYKM........PGST........CYREDEDNCMVYGRLYTWDAAQK.
...........................ACPAGFHLPTNEEFESLWKAAGG...DFN.........AGYLIKANYGWSGET
N.........GNDTLKFSAMPAGN..........MFDDGT.......YGNE...........NKFAFFWSSSTEGG...E
..ASVWYLS..SKSMGFSYMMK..PK...NFGFSVRCVE.
>ORF01650/313-528
TMIDPRDKQVYKVVKIEVKEHDYSQVWMAENLNYADSVKTPSLKGQNW........CYNNDEKNCKVSGRYYTWAAAIDS
VALANDSKNPLNCGYGKTCGINRGVQGICPDGWHLPTLHEWGLLGVALGN...AGV.........AGDSLKALTGWDYAG
TADN.....NGVDAYGFAALPTG...........RMVSTS.......SWSNV..........GSNVYYWSSEEDGT...Y
.EARYSNIN....NIYTKFYLFQGSK...KYGQSVRCIKG
>ORF03020/381-563
SLVDPRDGQVYKTKKIG......KQVWMAQNLNYADSTKTPSLANGSW........CYNDDPEYCKLLGRLYNWTAAKD.
........................V...CPDGWHLPSYDEWNVLESKFGG...QIM.........AGQYLKAQ.....AG
SLSN.....NGDDEFGFSALPAGG..........RFIDDS.......EHDKVNYLY.....LGDNAFFWSSTPEND...D
.YAYRMNIP....YSSNTTNIRSIKQ...KYGHSVRCVRD
>ORF01645/326-529
SVVDSRDGQIYKTVKIG......SQTWMAENLNYADSVQTPSLLGRSW........CFANKPENCAMAGRLYTWTAAVDS
VNLATDKDNPQDCGYEKLCNLS.KIRGICPEGFHLPDTTEWRTLISFAGG...DHI.........AGGKLESR.....LG
MYRD.....PGTDDYGFSAFPAGN..........KYRDRE.......FFEDS...........RDVYFWLLTEYSD...D
.DHLAYWSV....FFYETFNFSGGFK...DMGVPVRCVMD
>ORF03177/282-455
TMVDSRDGQTYKTLKVG......SWTWMAENLKYKT........SDSY........CFGDKDENCEKYGRLYKLDAMKDT
SSLN.................L..KQNVCPVGWHLPSQWEWDRLIDAVGG...TLL.........AGKRLKKLMGWFGDS
..AK......ADDGVGFSVLPAG..........IRFSDGG.......YSRD...........GLYSLFWTSDEYG.....
.....VFFN....YYSPRIKMMVELS...KLGASVRCIKD
>ORF01637/286-498
KLKDTRDGKEYKTVVIG......TQTWMAENLNYYD........KDNYNLV.GNAKCYQEEDKNCDVGGRLYSWTAAMNI
STKYRLSWYDKDIQY......P..HQGICPDGWHIPDSTEWRTLADYVKK...VDG.........SSGLLMSSKGWKASN
..YK.....PSTDPYGFSVIPVGAYYGRYADAHADFSQTE.......FDDD...........GLFANFWSAEEGKE...F
NLAVYVFFD....YRRDYMSMTASVYNEKERGFSVRCIKT
>ORF00747/341-516
ELVDDRDGQTYKTVKIG......DQWWMAQNLNYRR........EAKYKN..DYCYCYNNSKDNCDKFGRLYVWTAAADA
............................CPEGWHLPSTAEWKTLIDSVGG...EEV.........AGITLKTS.GWNRGG
..D.......ATDAFGFSVLPAG.....YR...DWLYQDD.......YYEE...........GYQALFWSSNEYE.....
NSSGCVYFQ....SVYDGADIRSGNK...DDGYSVRCVMD
>ORF03178/54-226
HMMDSRDGQIYKIVTIG......SQTWMSENLNYEM........ANST........CYDGFVSNCYKNGRLYAWKAALES
............................CPVEWHLPTQSDWHVLFSALGG...KVS.........AAIALKTSKNWGGGS
RGHK.....TATNASGFSALLSG..........YEKSNGE.......FSSD...........G.ETFFWSSDYYN....D
SLAYFMGLR....SESDEAFLLGENK...DNKYSVRCLKD
>ORF03020/154-343
EILDERDNQVYKTVIID......DQVWMAQNLNYET........AYSY...........CTDDDCAKYGRYYLWSAAVDR
KDCEHG..........NFCSLPPSGQGVCPAGWHLPSKDEYLRLFDNVGKYGGTNN....EF...VAAELRAQRGWSVED
N..........ADDYGFSALPTGY.........KLGSAG........VFAD..........VGKTTHAWTSTEVNS...I
G.ACQFRIY....EDRLYVSLIDDSK...GYPLPVRCVMD
>ORF04338/141-298
DLVDERDSAIYRTVVVG......SQTWMRDNLRLDVE........GSS........CAWDS...CGKYSREYTWALAMTS
............................CPKGTHLPSKDEFKILFDYVDAINGDT...........PIGMDLRSRVYIG.
........DYRDHGLDFFGFDAQ...........GSTAYG........................AAEYWTSDEID....D
DVAVYVYIRD.......PYFFTDEEK...TDSYPVRCILD
>ORF02491/1054-1254
TITDSRDGNSYKTIKIG......NQEWMAENLKFEVA........GSW........CGDNDNG.CATYGRLYSWDMAIGL
PKNPHPDS........IVIADTSSVQGICPKGWRLPTRRDWDSLLTQCNVEDLQKNATGYDETHTDVCGFSSIPTGYMN.
........VFFRNGIDYTEERDK...........IKYSTN........................NTAYWTAIQEKYYSRD
TTAVALIFNDK.SDSYVPNNWRLYDK...TDGLPIRCIKQ
>ORF01966/81-280
TMVDERDCRTYKTITIG......TQTWMAENLKFEYKVDGKT..YGNS........CNPDS...CETFGRHYTWAAAMDS
AVVFTNDSE..NCGYGVTCSPTYPVPGICPEGWHIPDSTEWVEFYKILNEDPHAMQA.........EDFIRSKSAIRKG.
........LVATNASGFSALYET...........LSLVAG........................HTASGAFFWSSTDYIT
SRAYYWHVSES.EAR..LDNNKICDK...GTGMAVRCIKD
>ORF00934/25-192
TFVDTRDGTEYKTCKIG......KQVWLAENLKFELD.......SDDC.......VAYDDDYQYFDKYGYLYSENGLEEA
............................IPEGWHLPTRKEWETMIRFAKK...DSRCKD.......VLSVIASDEWIKS.
..........SSDKYGFSMVAGG..........MRDCGDD.......FDLL...........DFSAHFWCVENERR....
....YSSVS.....FEDGVDEIDDEE..VPCYASVRLIKD
>ORF03178/248-425
QFVDIRDGNVYKMVTYG......KQTWMAEDLAYKA..........EHDD........ECLRYYCGDYG.SYTWKIAMGD
AYSQK...........N...RTRPVRGICPIGWHLPDTTEWNTLISVLGG...................KTAACDIFES.
...........KADNGFSMVANGN.........SLLCTEDG.......VES.........VCAESAFYWSSDKGNE...D
DYALGMRLD....VYVNGKKEVGIDSGLKREDMPIRCVKD