HMM Seed Alignment: TIGR02073
Download Alignment>OMNI|NTL02YP1123/93-842
HPPLSQGLPLSTAYYDRHGTLLRLSLANDDRYRLWTPL.EEISPLVIQGIQLHEDRGFYYHPGVNPISLLRGFWQSYVQG
GRQQGGSTLTMQLARMHWH..LN....TRSPTGKLRQIARAIQLELSYSKHDILEAYLNYAPYGRNIESIAAASLIYFDK
KPQQLTLPEALTLAVLPQSPSYRIDPTTGVLGSALTQARNRLFVRWQQTYPTDSSQMALFQLPLSLRQPEKMPYIAPHFI
EQIRRQNQQLANTQSQVDTTLDANLQQLVEKQVEAFIRRNNSRGIHNAAVLLLDTRDMGVRALVGSANYYDREIQGQVNG
TNAKRSPGSTLKPFIYALGLEQGILHPMTILKDVPSSFGA....YAPENFDHRFLGPVTATDALNFSRNIPAVYVASRLR
QPTLYQFLRLSGVTNMASEN...HYGLSLVLGGGEITLQELARLYAMLANRGTLHPIQMVQTDKTLP.S.........IR
LLSEAASFITLDMLRQHRRPGDTLAQS.P..TSLPVYWKTGTSWGFRDAWSAGIFGPYVLIVWEGNFAGKGNSAFVGADA
AAPLFFNIIDSIQANYPALREPKHPWPPQL......KRVAICLASGNLPTPWCQQQG..KTWFIPGKSPIKVDTVYRPVV
IDINSGQAACLPYDRSQTRTEVFEFWPSDLANVFAQAGLPKRQPPDRSHC.........KEGNTLASGNAPRITSPLRNT
TYTLRQSQQGRDQIVFSATLDADSTTTYWFVDDIYLGSSTSKKSIDWHPTRSGQYRIRAIDDHGRADSRLIRVE
>OMNI|SO0067/23-757
AQPLSQLMPSSREVLAADGSLLRLTLASDGQYRLWQDL.EDISPTMIQVMLLKEDRYFYYHLGVNPVALVRATFATYVDG
DRQ.GGSTLTMQLVRRVYE..IN....SRSVLGKLEQILAAFWLEARYSKRELLEAYLNLAPMGGNIEGVGAASQIYFHK
VAGELSLSEALSLAVMPQSPARRAR.....FQADFQAARDRLALFWQQTYPDDPRNQGLQVLTALGAERNELPFKAPHFA
RRQLRQDARIVH......TTIEPKLQALLELRIRQYITSKRHLGVNNATALLIDTRDQAIKAWVGSADFFNPMIYGQVDG
VTARRSPGSTLKPFLYALGLDQGIIHPQSILKDAPMAFGS....FEPENFDHRFTGPISARDALIKSRNLPAVWLAGQLT
DPNLYGFLRQAQIFGLRQES...HYGLALALGGGELTMMELGRLYLMLASEGRYYPLRERTEQPINPPS.........MQ
LLSPAASFLVLDMLKDNPR.ADGLPRQ.....GWRVAWKTGTSWGFHDAWSAGVAGPYVLVVWVGNFDATPNAAFIGAEI
AGPLFFNITDALQASLPSTADRIWAPPNTV......KKVNICAESGELPNLWCPKVI..EGWFIPGVSPVKVSTLHRPVW
VDNQTGMAVCPPYDAQTQHQEIFAFWPSDMASLFEQAGLPRKLAPQLPES.........CRNAIQLSNIDPVIRSPLKNV
TYSLRQS.HLHEHIALLADAAPDASMLYWFVGRDLIGQSLPKQALEWRPSTSGDYKLSVTDDKGRSTSLNLNVS
>OMNI|NTL01PM0646/31-781
YSPLKDHFPYSSAVYDEQQNLLRLTTAKDEKYRLWTPL.HDISPKLVDAVLFQEDEWFYWHFGVNPYGLLRGAWQTYILG
NSPQGGSTITMQLARVLWA..ID....SRSLLGKTEQILRAIQLEIRYSKKEILEAYLNFAPYGRNIEGAGTASLIYFNK
ANHKMNLAEALTLAILPKNPNSYIRQNNQQLNSALFKARNQLYQRWIAQYPADQQWQTDFQLNYPLRPLEKLPFFAPHFV
DQLLQQYPEQTH....IVSTLNSSQQRLIERITRRYLSQQYTKGIENVAVLLVDNRDMAVKALIGSGNYFNPAISGQING
TLANRSYGSTLKPFIYALAFDQGLAHGKTVLKDLPTTFGD....YQPENYEGNFLGPVSVTQALLQSRNIPAIDLAKQLN
.PDLYDFLQQADIKLPKSKS...YYGLSLVLGGAELNLQQLASLYAMLANQGRWQPLKFNQRD.SLPAP.........KT
VLSQESAVMIHDILRQNFR.TDMQNKS.IK.TALPLYWKTGTSNGLRDAWTAGYFGHYTLVVWFGNFNNKNNPHFIGRAL
AAPLFLQLADSLIASEPQMRDIVTENINQLNL....KNVLVCQADGNLPNAYCQQQV..NTLFIPGKSPITISQLYQPFM
VLKNSDMLACSTHDKAETEQKIYEMWSSDFQQIFAQAGVMKRMPIINTACPY....EQQHQALQNLHHNNPQIVSPLAQR
HYYIEHD.NPKSPLLLSAIAAGEVKKLYWFVNNSFIGEALPQQPLFWQPRSAGYYTISVTDDYGRSTSLSINVL
>SP|P76577|PBPC_ECOLI/33-770
PLPLHEV.NPARVVVAQDGTPLWRFADADGIWRYPVTI.EDVSPRYLEALINYEDRWFWKHPGVNPFSVARAAWQDLTSG
RVISGGSTLTMQVARLLDP.......HPKTFGGKIRQLWRALQLEWHLSKREILTLYLNRAPFGGTLQGIGAASWAYLGK
SPANLSYSEAAMLAVLPQAPSRLRP...DRWPERAEAARNKVLERMAVQGVWSREQVKESREEPIWLAPRQMPQLAPLFS
RMML..GKSKSDK...ITTTLDAGLQRRLEELAQNWKGRLPPR..SSLAMIVVDHTDMRVRGWVGSVDLNDDSRFGHVDM
VNSIRSPGSVLKPFVYGLALDEGLIHPASLLQDVPRRTGD....YRPGNFDSGFHGPISMSEALVRSLNLPAVQVLEAYG
PKRFAAKLRNVGLPLYLPNG..AAPNLSLILGGAGAKLEDMAAAYTAFARHGKAGKLR.LQPDDPLLER..........P
LMSSGAAWIIRRIMADEAQP...LPDS.ALPRVAPLAWKTGTSYGYRDAWAIGVNARYVIGIWTGRPDGTPVVGQFGFAS
AVPLLNQVNNILLSRSAN....LPEDPRPNSVTRGVICWPGGQSLPEG.DGNCRRRL..ATWLLDGSQPPTLLLPEQEGI
NGIRFPIWLDEN.GKRVAADCPQAR...QEMINVWPLPLEPWLPASERRAVRLPPASTSCPPYGHDAQLP.LQLTGVRDG
AIIKRLPGAAEATLPLQSS..GGAGERWWFLNGEPLTE.RGRN.VTLHLTDKGDYQLLVMDDVGQIATVKFVMQ
>GB|CAE32516.1/35-718
PLPRFGS.DGAQVVVAADGTPLRTYPSRDGVWRYPVGP.GQVSPHYLETLLTYEDRWFYWHPGVNPFALARAGWQWAAHG
RIVSGGSTLTMQVARLLDP..ELAGQPSKTLSAKLRQAWRAIQLEMHYSKDEILGLYLSHAPMGGIVEGVEMGARMWLGK
SAADLSHAEAALLTALPQAPSRLRP...DRHPQAAQLARDKVLQRMAQRGVWDAALVADARIENVVAPPLRARWLAPLAA
QRLLGEAGPAAGV...VRSTLDPDIQSTVEAMLLDRVDALPPK..VSMAVLVMDNDSLEVKAYAGSADFTDDSRYAHVDM
VRGVRSPGSTLKPFLYALALDEGLIHSESLLLDAPLSFGG....YAPGNFQAAFAGPVSVAQALQRSLNVPAVDLLDRVG
PARFASVMLAGGVHLRMPAG..AVPNLSLILGGGGTTLEELVGAYRALARGGLSGRPR.LRASQPRIEA..........R
LMSPGAAWIVRDILESGGHPDRPLFQG.GAAGR.QLAWKTGTSFGFRDAWAVGVTDRYTIGAWVGRPDGTPNPGFFGANV
AAPLLQDIVAALP..AGAP...VP.RTRPPQVQAVVTCWPLGWRLGSAPAGICPERR..MAWALDDTVPPSFVG......
................YADTATGP...............................................LRIEGVAD.
GTILR.PVPGRRAVTLEVGAQGASGEVWWMLDGKVYRSGAAGQAQTLTLSRNGRYALTVMDGQGRYAGLEFEIS
>GP|27352702|dbj|BAC49704.1/74-733
PLPLDEARQASTTIVDRNGKLLRAYAMADGRWRLPVDARTNVDPIYLKLLLAYEDQRFYAHDGIDPLALGRAALQLGTRG
HIVSGGSTITMQLARLMEP......RRQRSLYAKLRQMVRAIEIERTLGKSEILDLYLALAPYGGNLEGIRAASIAYLGK
EPKRLSLAEAALLVALPQSPETRRL...DRYPDAALKARDRVLDRMVEEHVVSVDDAKQAKAVPVPKLRKPMPVLAPHAS
.DTALATVKDAPV...IKLTLDANLQKVLEPLARDRAVALGAN..ISVGIIVVDNESGDVLARVGSADYFDESRAGQVDM
TRAIRSPGSTLKPFIYGLAFEDGFVHPDSLIDDRPVRFGS....YAPENFDMTFQGTVPVKKALQLSLNVPAIVLLDRVG
ASRLASRLRQAGGNLILPKD..EAPGLAMGLGGVGVTLQDLAQLYAGFARLGTTKPLR..EVVAARDDR.E......PLR
LLDQVAAWQVGNVLLGTPPPENAAH........NRIAFKTGTSYGYRDAWSVGFDGRMTIGVWVGRPDGAPVPGLIGRVA
AAPILFDAFARTGKTLAP.......LPKP..........PKGTLVASNAKLPLPLKR..FRPVGELVRTGS..E......
.....................QAL...............................................H.IQFPLNG
SRIDVDRSGGSEAAAMPVKVAGGVLPMTVMVNGTALGEIDGRRQRLIDPPGPGFARLTVIDATGAADTVVIRIQ
>OMNI|CC3570/39-688
PPDMTRARQSSPVVLDRRGAWLRALPVEDGRWRIRADL.ERTDATFQKRLIKVEDARFYWHLGVDPLSLVRAVGSAVVHG
RVTSGASTLTMQTARLLEP......RP.RTLGAKLIEMIRAVQLESRLSKREILALYLTLAPYGGNLEGARAASLSYFGH
EPSSLTDGEQALLIALPQSPEARRP...DRRPEAAKAARRAVLDKMVRGGTLSAAAAYEAENEPLPR.RAAFPTLAWHAA
GELARAAPKGQAS...VVSTLDADLQSRLEPMAAAVAAAQGPD..ATAAIIVVEIRNRAVRASVGSAG..RDRAGGWVDM
TRALRSPGSALKPFIYAMAMDDGLVAADTQLTDSATRFAD....YQPENFDRVFHDKVTVREALTHSLNVPAVATLEKLG
PEAFAGRIEAAGAHLARPKAKLKEAGLALALGGEGITWRDLVMLYAALGDNGIAKPLAWTQADAATRERSG......GTR
LVRPEAARQVLDILREAPSPKGRAPSA.LTRGGPSMAFKTGTSYGFRDAVAAGVVGGYAILVWTGRADGGARGGLTGRDA
ALPLLFDVADAIG.AQGS.......APR...........P.....IAPKAAPLALQE..LRAADE...............
......................GP...............................................R.LIFPPDG
AAVQVDALGP.KARGLVLAAEG..EGLTWYVEGAPLDLDPVSGRAIWKPAAPGFYKLAVVDAQGRRVTAKVRIK
>GP|29337464|gb|AAO75269.1/34-772
LPRHLFHVPYSTVVTDRNEELLGARIASDGQWRFPPRN..TTPEKIKECLITFEDKHFYHHWGVNPFAIGRAFYQNVKNK
RIVSGGSTLTMQTIRLARN.......ESRTFREKLIEMIWATRLEFRASKEEILSMYISHAPFGGNVVGLDAAAWRYFGH
SADDLSWAESAMLAVLPNAPAMIHLS...KGRKTLLDKRNRLLKQLLEKKTIDSSTYELAISEPLPDEPHPLPQIAPYLV
SRFYQERNGEYS.....RSTINKGIQTQIEDLAERWSNEFRRSDIRNLAILVIDIPSNQVVAYCGNVHFDQKQGGNQVDV
IQAPRSTGSILKPFLYYAMLQEGSLLPDMLLPDVPVNING....FTPQNFSMQFEGAVPASEALARSLNIPAVTMLQRYG
VPKFHSFLQQIGLKTINRSS..SHYGLSLILGGAEATLWDVTNAYAMMGRSLLQLPQRSCSLLLPTSRITES......TD
PFQPGAVWQTFDALKEVNRPEEIDWKS..IPSMQTIAWKTGTSYGFRDAWAVGVTPRYAVGVWVGNATGEGKPGLVGAQT
AGPVLFDIFNLLPASSWFT......RPTG.....IFVEAEVCRKSGHLKGRFCDETD..TLLVLPAGLRTEACPYHHLVT
LSADESQRIYENCANTEPTLQKSWFTLPPVWEWYYKQHHPEYKPLPPFKAG..........CGEDTFQPMQFIYPPMNAR
IKLPKQLDGSKGFLTVELAHSNPNATIFWHLDETYQAQTQDFHKISLQP.AAGKHSLTAVDGEGNTISTTFFVE
>GB|AAP77330.1/44-771
PHSDLFESRYSKSVFDRHNHILSVFLTPEQQWHLKSPS..PISSKIRAAVLTYEDKRFYSHFGIDILALLRSIKNNLTSS
KRI.GGSTISMQVVKLYLN.......SPRTYTNKINEFFQTLALEAAFNKDEILHMYLNNAPYGGNIIGYHSAALLYFNK
DVGSLTWAESALLAVLPNAPGLFNLK...KNTDILKNKRDALLVKLHTQGYFDKEILSIALKEPLPSRKIHHHNLAPHLS
LKLIAARKQNN.....IVSTIDKTLQARLETKIKQYHKKLLSQGILNLAALVVDTQSGEILCYVGSQDFLDIDNFGQIDG
VSAMRSVGSLLKPFLYALSIDDGLIAPQSLLVDVPLFFSN....FNPQNATKTYQGLVPAQTALQKSLNVPFVKLLQNYG
YEKFFFTLQDMAGFEASNAQR..YG.LSFILGSKEMNMLQIARLYRGLAQYGEFGELYTLLNTQKKPLK..........R
FLSKGSAYLTLQTLKELQREGDLDYHR....EKMAFSWKSGTSYGRKDAWAAGASPQYTIVVWAGNFTGKANPNIFGVKT
AGTLLFEILEELPNNNISFS.....LPAESLKNIEVDRLSGYGVNDELKILLEESKIGLSSILFPTSAQPLQPSPFLKKV
FLANEKEVDSLAKDFLFAKPSLALKLPTNVLAYYKLQNVNIQKHLLERNK................S....LQIIYPLQG
ITIIQPKDFDGQQELIIRIANLKNQQVSWYLNEKLIHIS..TQSTLKLFLARRTHSLVIVGEDGNMDTISFNIE
>GB|AAQ60232.1/43-723
KEVKAAWQPSDVTLLDRHGQVLQRLRVDKQARRQDWVGLADTSPAFRQALVLSEDKRFYQHSGVDWSGAAAAAWANLWNT
RTR.GASTLTMQLAGLLDDDL.KVGKGGRSLWQKMGQTWSAAWLEQHWTKAEILEAYLNLVGFRGELVGLSSLSSTLFGK
LPSGLNLEESAIAVALIRAPNAAPD.......KVAGRACRILQDMGRKPDCAALGVRATQALARSRAANPLAEQDAPHFA
QKLQQARR..FAAGSRVATTLDLPLQRFAAAALRRHLSALSQRNVQDGALVVLDNQSGDILAWVGSSG.RGLSNAAQVDG
VTAPRQAGSTLKPFLYQQALEKHYLTAASLLDDSPLDLQTGSGLYAPQNYSKDFKGLVPVRSALASSLNIPAVRTIEMVT
PNAARDRLVKLGFSTLTEDG..DYYGYSLALGAADIRLLDLANAYRTLANQGLSSPPRWTLTDAKPKP..........AR
LLDAASSFIIADILSDRTARALTFGLESALSTRYWSAVKTGTSKDMRDNWAVGFSRRFTVAAWVGNASGEPMWDVSGMHG
AAPVWQTVLDRAQQSAAP.......LPPPA........PPAGLVRQRVRYQGDVAAP..RTEWFLAGTQRALIVPQKG..
.................A...AADL.............................................TPGIAAPVDG
SIFALDPDIPPANQRMVLRARGVAK.PQWWLDGKRLGSG..AE..LAWFPWPGRHRLELRGGDGKVVQAVKFEV
>OMNI|NTL02LI2187/46-708
KEIRNSYRPSDGVILDHHGRILQTIRWNVRERKLSWTEEGEIPETFLLALFLQEDKRFFEHSGVDRIAILGSIKDRLFGN
SRR.GASTLSMQLAGIF...L.GTKPGQRNIFDKWEQMRTAQKIEKTWTKNEILTAYLNLTQFRGELRGLRAASRGLFQK
EPSTLSDTESILLVAMLPYPGASYK.......VLAKRSCILAKKIQKEELCDYFESVAKKAISKINNL.PSTEGIAYHVA
LKIFRENPEIFSIDGKIKTTIDFDLQWKITEIAKNNLYGLKKQNVSETGILVLDNISGAVLAYIGNLE.D..SNSFYVDA
IQSKRQAGSTLKPFLYGLAFEKEILKPNSILEDSPAEWNAVSGIYKPSNYSDTYHGNVQAKYALASSLNIPAIRVLDLVN
VPDFVDKLKELGLNGLKR.A..DFYGSSLALGTADVTLFELTNAYRTLANGGISSKPTFFPFEAKRTIQENFKEGNFWNR
VYTKKSADTLSEILSDREYRSLSFGLNNYLSTRFFTAVKTGTSQDMRDNWCIGYSKKYTVGVWVGNMNGKPMWDVSGVTG
AAPIWNTVINLLQEREE.....................QPNNLTLKNSYIP.............PA...RQLTELSK...
......................................................................IPKILIPGNE
TIYALDPDIPEGRQKLHFYASQFDSGFKWILDGKSIQEAKEKE..VFWKPEKGFHILSLQDQNGKIIDSVVFEV