HMM Seed Alignment: TIGR02042
Download Alignment>SP|P30008|SIR_SYNP7/5-579
AAP....QKLSKVEDLKARSQYLLEPILSQLQEESTHFNEDGIQILKFHGSYQQDNRDNRVKGQEKDFQFMLRLRSPGGY
IPPQLYLTLDQLADDYGNGTLRATTRQAFQLHGILKRDLKTVIRRIVENLGSTISACGDVNRNVMAPPAPFRDRPEYEWA
RTYANNIADLLTPESGAYYELWLDGEKVLSGEPDPAVLAARR.NPKG.RVADSVEPLYSDRYLPRKFKIAVTVPGDNSID
LFTQDIGLVVIGNDRGELEGFNVYVGGGMGRTHNKEETFARLADPLGFVPAADIYAAVQAIVATQRDYGDRSNRRHARMK
YLIHDWGIAKFKEAVESVFGKAIAPVRELPPFRYRDYLGWHEQGDGKWFLGLPITSGRIKDDGNWQLRSALREIVSRWQL
PLLLTGSQDVLIYDVQPGDRAAIDKLLRDR.GVHTVEAIDSLQRYAMACPALPTCGLAITESERALPGLLVRIRRLLEEQ
GLP.DEHFVVRMTGCPNGCARPYMAELAFVGSAPNTYQLWLGGSPDQTRLARPFIDRLADGDVETQLRPLFVFFKQSRQA
GESFGDFCDRVGFDALRQFSESY
>OMNI|NTL01NS1346/5-586
APPPTTGRKPSKVEGLKENSNFLREPVATQILEDTTHFTEDAVQILKFHGSYQQDNRDNRTKGQEKDYQFMLRTKNPGGL
VPPQLYLALDKLADEYGNHTLRATTRQGFQMHGILKKNLKAAIATIVRNLGSTLGACGDINRNVMAPPAPFKNRAEYQYA
WEYAQNIADLLSPQTGAYYEIWLDGEKAISAEESPEVKAARQSNGNGTIIHDTEEPLYGTYYMPRKFKVSVTVPGDNSID
LYSQDLTLVVLTDKKGNLEGFNIFAGGGLGRTHNKEETFARLADPIGYVAKEDVYSAVKAIVATQRDYGDRTDRRHARLK
YLINDWGVDKFRAKVEEYFGKPIAPFKQLPEFKYHDFLGWHEQGDGNLFLGISIDNGRVKDEGAFQLKTALREIVEQFNL
PIRLTPNQNLIFYEITPENKPAIQAILDRCNVVSDPTTIEPLVRYAMACPALPTCGLAITESERAIPGILERIRTLLDKL
GLQ.NEHFVVRMTGCPNGCARPYMAELGFVGSAPESYQVWLGGSPNQTRLAQPYVEKLHDNDIESFLEPIFVYFRKYRKS
GESFGDFCDRVGFDAIREFVAEY
>GP|3721540|dbj|BAA33531.1/64-636
AKPAAVEPKRSKVEIFKEQSNFIRYPLNEEILNDAPNINEAATQLIKFHGSYMQYDRDERG...GRSYSFMLRTKNPGGE
VPNRLYLVMDDLADQFGIGTLRLTTRQTFQLHGVLKKNLKTVMSTIIKNMGSTLGACGDLNRNVLAPAAPFAKK.DYMFA
KQTADNIAALLTPQSGFYYDVWVDGEKVMTAEP.PEVVKARNDNSHGTNFPDSPEPIYGTQFLPRKFKIAVTVPTDNSVD
IFTNDIGVVVVSNEDGEPQGFNIYVGGGMGRTHRMETTFPRLAEPLGYVPKEDILYAVKAIVVTQRENGRRDDRRYSRLK
YLLSSWGIEKFRSVTEQYYGKKFQPCRELPEWEFKSYLGWHEAGDGSLFCGLHVDNGRVKG....AMKKALREVIEKYNL
NVRLTPNQNIILCNIRQAWKRPITTVLAQG.GLLQPRYVDPLNLTAMACPAFPLCPLAITEAERGIPDILKRVRAIFERV
GLKYSESVVIRITGCPNGCARPYMAELGLVGDGPNSYQIWLGGTPNQTSLAKTFKDKLKVQDLEKVLEPLFFHWRRKRQS
KESFGDFTNRMGFEKLGEFVEKW
>GP|804953|emb|CAA89154.1/66-637
AKPETAT.KRSKVEIIKEKSNFIRYPLNEELLTEAPNVNESAVQLIKFHGSYQQYNREERG...GRSYSFMLRTKNPSGK
VPNQLYLTMDDLADEFGIGTLRLTTRQTFQLHGVLKQNLKTVMSSIIKNMGSTLGACGDLNRNVLAPAAPYVKK.DYLFA
QETADNIAALLSPQSGFYYDMWVDGEQFMTAEP.PEVVKARNDNSHGTNFVDSPEPIYGTQFLPRKFKVAVTVPTDNSVD
LLTNDIGVVVVSDENGEPQGFNIYVGGGMGRTHRMESTFARLAEPIGYVPKEDILYAVKAIVVTQREHGRRDDRKYSRMK
YLISSWGIEKFRDVVEQYYGKKFEPSRELPEWEFKSYLGWHEQGDGTWFCGLHVDSGRVGG....IMKKTLREVIEKYKI
DVRITPNQNIVLCDIKTEWKRPITTVLAQA.GLLQPEFVDPLNQTAMACPAFPLCPLAITEAERGIPSILKRVRAMFEKV
GLDYDESVVIRVTGCPNGCARPYMAELGLVGDGPNSYQVWLGGTPNLTQIARSFMDKVKVHDLEKVCEPLFYHWKLERQT
KESFGEYTTRMGFEKLKELIDTY