HMM Seed Alignment: TIGR01972
Download Alignment>OMNI|NTL02SC4375/6-510
LTVTAALPAVGAIATAAVPA...AKRTA...AKWLALLVSLATLGLAIAVLVR..FDPDGD............RYQLTES
HSWIAD.......FGVRYELGVDGIAVALIALTALLIPFI....ILAGWHDADPLETGS.SRWRPTQG............
FFALILAVEAMVIISFEATDVFLFYIFFEAMLIPLYFLIGGFGDRAHEHGEKTAATQRSYAAVKFLLYNLAGGLIMLAAV
IGLYVV.......AGNFSLTEIAEARANGSL....DMATSTERWLFLGFFFAFAVKAPLFPLHTWLPNAMGESTAPVAVL
ITAVVDKVGTFAMLRFCLQLFPEASKWATPVILVLAVISIIYGALLAVGQR......DIKRLIAYASISHFGFIIMGIFA
MT............SQGQSGATLYMVNHGISTAVLMLIAGFLISRRGSRLIADFGGVQK.....VAPILAGTFLIGGLAT
LSLPGLAPFVSEFLVLVGTFT........RYPVIGIIATLGIVLAALYTLVLYQRTMTGP..................VK
A................EVNGMPDLRVRELVVVAPLVALLIFLGVFPKPVTDIVNPAVEQTMSDV
>OMNI|CT0775/2-536
LSFIVFLPIIAGLVILAVPS.SQKQIIR.....IVSLLAALGQGVLAVLIWRH..YDPTMAGIVAAPGGSPVGSFQMIER
IPWISLDLGSFGPLNIEYFLGVDGLSITMVLLTALISIIG....VLSSWP.............IQK..........QVKG
YFILYNLLSTAMMGCFVALDFFLFYVFWELMLLPMYFLIGIWG...........GPNREYAAIKFFLYTLFGSVFMLLVM
IGLYFSVTDPLTGHHTFSLVAMADQANYIKGTILGPDSVTWRYVAFIVLFVGFAIKVPMFPFHTWLPDAHVEAPTPISVI
LAGVLLKLGTYGMMRINFPLFPEVYQAGLYVIGVFGAINIIYGAFCALAQQ......DLKKMVAYSSISHMGYVLLGLAA
AN............TEGMIGALYQMFNHGTITAMLFLLVGVIYDRAHARQIDKFGGLAT.....YMPVYTGFVIVAWFAS
LGLPGLSGFISEALVFVGAFSAP......VTRPIAMVSVLGIVFGAAYLLWSLQRMFLGKRKPDALYDLEVDVDGHEHIH
F...............HDWKGKLDLDARELTMLVPLVIIVIALGIYPMPVMGLITTSVNKLVQVL
>OMNI|CC1938/5-488
LSLTTFAPLAGVAVILAARALHGAGEKTDTLAKWIALVTTLVTFGLSIVLTVQ..FDPKNP............GFQFVED
IAWF.........AGLHYRMGVDGISVLFVLLTAFLLPIC....IVASWK..........S..VEK..........RVVE
YLIAFLVLETLVIGVFCALDIVLFYLFFEGGLVPMFLIIGIWG...........GKRRIYAAYKFFLYTLLGSVLMLAAI
LAMIGISG.......TSSIPELMTFK..FA........PWLQTWLWLAFFASFAVKMPMWPVHTWLPDAHVEAPTAGSVI
LAGILLKMGGYGFMRFSLPMFPNASEMFQPLVFALSAIAIVYTSLVAFRQT......DIKKLIAYSSVAHMGFVTMGIFS
GN............AAGEQGALFQMLSHGIISGALFLCVGVVYDRMHTREIAFYGGLTN.....RMPMYAAVFMLFTMGN
VGLPGTSGFVGEILTMTGVYK........ASTWTAIVSALGVILSAMYALTLYRRVMFGE..................IT
N...............PQLATITDLDKREILIFAPLIVSTLVLGIYPNLVFNLTATSVDALVGAW
>OMNI|NT01MC3451/2-482
LSLLTFLPLIGALAILAFVERQRDDIAR.....LAAMGISTVVLILSLLLYGE..FDPSVA............GFQFTQE
AAWLPA.......LGIHYRMGVDGISYPFVMLTALLTPIC....ILASWQ..........S..IQK..........RVKE
YMAAFLALESFVIGVFCALDFALFYVLWEAMLIPMFLIIGVWG...........GQNRVYAAMKFFLYTLAGSVLMLVAM
ISLYVTTG.......TFSIPELMEVQ..LP........FNYQMWLFLAFFIAFAVKVPMWPFHTWLPDAHVQAPTAGSVI
LAGILLKMGAYGFLRFSLPILPDASRYMADFIFVLSLVAIVYTALVALVQT......DMKKLIAYSSVSHMGFVTIGIFA
FN............QQGIEGSILQMINHGIVSGALFLIVGVIYDRLHTRELSRFGGLAI.....RMPIYAVIFMLFTMAS
VGLPGTNGFIGEFLILMGAFF........ANTTVAFVAATGLVLGAAYMLWLYKQVMFGE..................MV
H...............EENRSLMDVNGREIALFVPLIVLVLWIGFYPNPFLDAFHSSVAHLVDQV
>OMNI|NTL01SMA00836/6-484
LSLIVFVPVAGAAVLMFMR...SDDAVR.....WTALGFGIVDLALCVVMLAG..FDTTTH............EMQFTES
RPWVPA.......LGITYALGVDGISALFLFLTALLSLIS....VLASWV..........A..IDR..........KVKE
FMVSLLVMQALMLGVFCALDLFLFYVFWEAMLIPMYLIIGVWG...........GEGRVYAAFKFFLYTLAGSILFLIGV
IVLYFQGGE......TFDILALTGQD..LP........FGVQSWLFFAFLVAFAVKVPMVPVHTWLPDAHVQAPTAGSII
LAGVLLKMGAYGFLRFSLPMLPEASLYYSTLMLALSALAIVYGGLLALAQD......DLKKLVAYSSISHMGFVTLGIFA
LN............LRGLEGSILQMFNHGITTGALFLFVGLIYERTHTRSIANYGGLMK.....AAPVYTAFLALFTLSS
MALPGTNAFVGELLVLSGGFA........ANLAAGAAAVVGALLSAAYLLGMYGKVALGP..................PS
V...............SARYEIHDVNGREMAAILPLAIFVLWVGLYPRPFLEIIDASVRNLLVQV
>OMNI|NMB0258/7-493
LSLAIWIPIAAGVLVLATGSDSRAPFAR.....VLAFMGALAGFLVTLPLFTG..FDRLSG............GYQFTEF
HEWIPL.......LKINYALGVDGISVLFIILNAFITLLV....VLAGWE..........V..IQK..........RPAQ
YMAAFLIMSGLINGAFAAQDAILFYVFFEGMLIPLYLIIGVWG...........GPRRVYASVKLFLYTLMGSLLMLVAM
VYLYYQTG.......SFSIVDFQNIEQ.IP........LGVQQLLFVAFFLSFAVKVPMFPVHTWLPDAHVEAPTGGSMV
LAAITLKLGAYGFLRFILPIMPDAARYFAPVIIVLSLIAVIYIGMVALVQT......DMKKLVAYSSISHMGFVTLGMFL
FVDGQ.......LDDWALKGAIIQMISHGFVSAAMFMCIGVMYDRLHTRNIADYGGVVN.....VMPKFAAFMMLFGMAN
AGLPATSGFVGEFMVIMGAVK........VNFWVGALAAMTLIYGASYTLWMYKRVIFGA..................IH
N...............PHVAEMQDINCREFAILAILAVAVLGMGLYPNAFIEVVHQAANDLIAHV
>GP|21113678|gb|AAM41789.1/7-495
LSLLIWLPIIGGALILALR...NAETAR.....WASLAVAVATFVLSLPLLG...YDTAND............AMQFIEQ
HAWIPA.......YNIGYNLGVDGIAVALIVLTTLVTVLA....LIGAWR..........S..IDK..........RVNQ
YVAAFLILEGVTVGIFAATDAMLFYVFFEAMLIPMFLIIGVWG...........GPRRIYAAMKFFLYTFLGSVLMLVGL
IYLYLKGG.......SFQLADLYALQ..LT........AKEQTWIFFAFMIAFAVKVPMFPVHTWLPDAHVEAPTAGSVI
LAAIALKIGGYGFLRFNLPILPDASNQWAWLVIALSLIAVIYVGLVALVQD......DMKKLVAYSSIAHMGFVTLGTFI
AFTLVREYGSTDAARLGLQGAMVQMISHGFVSGAMFSCIGVLYDRMHTRRIADYGGVVN.....VMPWFATFAMLFFMAN
AGLPGTSGFVGEFMVILASFQ........KHPLVAFAAATTLVITAAYTLWLYKRVFFGE..................VA
N...............AHVAELKDINGREAFVLGVFAAGVLALGLYPKPLTDLMEPSIAKLATQI
>SP|Q9ZCG0|NUOM_RICPR/7-491
ISITIFLPLISVLYILLFFNQNKKADKLSI...YVAMLSSVLTFISTIYILIE..FDVSNN............TYQFVER
YTWLDK.......IGLEFHVGVDGIAIFFVVLTSFLTLIC....IIGSLF..........T..IKK..........YIKE
YLVCFLLMESLCIGAFTSINLLLFYLFFEAILVPMYIIIGVWG...........GDNRIYAALKFFLYTFFGSVFFLLAL
IYIYSKIH.......SFDLTNILELIGNIP........LFAQKILWWAIFIAFAIKTPMIPFHTWLPDAHVQAPTTGSVI
LAGILLKLGGYGFLRVLLPLFPNASQEFAIYVIYLSVIAIIYASLVALAQK......DIKQMIAYSSIAHMGYVTIGIFS
FT............EIGISGAIFQMLSHGIISSSLFLIVGTLYERLHTKEIAKYGGVAN.....KMPILATFFMIAMLSS
IGLPSTSGFIGEFLSLLGIYK........VNVVTAFIAALGIILGAVYMLKLYKEVMLGE..................IT
N...............TEIKHFRDLYKYEIISIAPLILLIIYFGLMPNSILNVFHLSVENLLIKF
>OMNI|HP1272/9-489
LSVVIFFPMLSALLAFFMSDQ.........ASRAYAIVIALIELLLILLLWHG..FDIQTA..........GMQFEEMKE
LVYQIG.........VNYHVGVDGIALFLLLLNAIVVLLS....VIYVKE..........................RRKD
FAICLLLLEGILMGVFSSLNMIFFYAFWEISLLPVLYLIGRFG...........RNNKIYSGMKFFLYTFLASLCMLLGI
LYIGYDY.ANNYGMMSFDILDWYQLN..FS........SGVKTWLFVAFLIGIAVKIPLFPLHTWLPYAYSNAPTLGSVM
LSALLSKMGTYALLRFLLPLFPDLSEIYLTPIAIAALCMIIYGGFLAYAQK......DLKTLIAYSSFSHMGVVVLGVFS
FN............VEGISGAVFMMFAHGIIVMGLFLLAGILEERASSLEIARFGSIAK.....SAPIFAAFFMIVLMAN
VGMPLSIGFVGEFLSLLGFFA........TYPLLAIIAGTSIILSAIYMLTSYKDVFFGN.................LKA
GS..............NQISVFEDLNAREVGVLSVILALILILGIYPKVLLKPIEQGSKQLLEVI
>OMNI|NTL01CJ01494/2-473
LNYLIFFPLISAFVVLLLNRG.........GVKVFSVVVSFMILALNLDIFAD..F...LQ..........GVSFDYNLS
FKILKF.........FSFHVGVDSIALVLILLSSLMIFLS....FLFLKL..........................EQKA
LISCIFFLEFAIMGLFSAKDGLLFYVFWEFSLLPLLYIMGVYG...........KD..FRAGVKFFIYAFAGSILMLVAL
IYQAYLN.YQLLNIFTFDLEIWKNNASAVN........FTEQLLLFGAFFIAFAIKAPLFPLHTWAPKVYANSPILVSVM
L..VVFKMAPFGFLLFCLPLFPDASVYFMPLIVALCIVSIVYNALIAYRAE......NIKELIAYSSISHLGVMILGIFS
LN............ALGISGAVFYMFAHGIVTGALFLMVELLYQRYHTYDISFYHSLAK.....KAPLFSIFFMLILLAS
VSLPLTVSFVGEFLILLGIAK........INLFYALLAGLVIILGAIYMFAVFRKIFFMQ.................KQS
.................FIEGFS.LLFREIVALVCIVVMIFGLGLMPNILLKPIQKDVDNLIKTM
>OMNI|NTL02LI0885/8-490
LSVFLFLPFIGVPLLFLSNKVN........WLRFIAGSFTLLPFLIIVGLYFK..YDPTNS..........SLQFVDRIW
GIIVSGN......LKVDYHIGLDGFSLLLCGMSSLLFFLSTLATWTSITN..........................RIRE
FYVYLMIVEMSVHGVFLSGNLVLFYIFWEAMVSPMVLMVGIWG...........EDQRVKAAIKYLIFSFTGSVLMLAGI
LILYFKTGTIVIEELSTGLLPEIPKN..............IRLFMFFAFVLAFAIKVPLFPLHTWMPDVHSQAPTVGSVD
LSGILLKIGLYGFIRLAIPLFPEEMLEYRELLGALCIAGIIYGAVIAMAQE......NSKRVVAFSSLSHMSFCMLGILS
FT............EEGMAGGMLQMLNHGFTAGMLFFMLGMLHERIGNNDISKAGGLSK.....LLPVFSVFFAIAIFSS
LGVPGTNSFIGEFLIILGSIK........SNIVYGALAATGVVFAAGYLLLFAKRMIFGE.................PTK
N.................LIEHNDLNLKEWVILVPTVIMIFWIGIYPKPFLKVLEPSVKVALNSA
>SP|P31978|NUOM_ECOLI/3-500
LPWLILIPFIGGFLCWQTERFGVKVPR......WIALITMGLTLALSLQLWLQGGYSLTQS.......AG.IPQWQSEFD
MPWIPR.......FGISIHLAIDGLSLLMVVLTGLLGVLA....VLCSWK............EIEK..........YQGF
FHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASD.....GK.TRITAATKFFIYTQASGLVMLIAI
LALVFVHYNATG.VWTFNYEELLNTPMSSG..........VEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVD
LAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQT......DIKRLIAYTSVSHMGFVLIAIYT
GS............QLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWS.....KMKWLPALSLFFAVAT
LGMPGTGNFVGEFMILFGSFQ........VVPVITVISTFGLVFASVYSLAMLHRAYFGK.................AKS
QIAS...............QELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWF
>SP|P57263|NUOM_BUCAI/3-496
LSLLIIIPFLSSFFSFFSPRLHNNFPR......WIALSGIIATLLVVIQIFFQENYHIFQI........RHYPNWNCQLI
VPWISR.......FGIEFNIALDGLSIIMLIFSSFLSIIA....IICSWN............EIKK..........NEGF
FYFNFMLVFTGIIGVFISCDLFLFFCFWEIMLIPMYFLIALWSDKTE......KK.KNFLAANKFFLYSQTSGLILLSSI
LLLVFSHYYSTN.ILTFNYNLLINKPINIY..........VEYIVMIGFFLSFAIKMPIVPFHGWLPDIHSRSLSCGSVE
IIGVLLKTAPYALLRYNLVLFPDSTKSFSLIAVFWGIISIFYGAWIAFSQT......NIKRLIAYSSVSHMGLILIGIYS
NN............ERALQGVVIQMLSNSLTVAALCILSGQIYKRFKTQDMSKMGGLWS.....CIYWIPGFSLFFSLAN
LGVPGTGNFIGEFLILSGVFE........VFPLVSILATIGIVFSSIYSLNVIQKIFYGP.................CKQ
NIK..................VFFINKQEVWTIIALVFTLVFLGLNPQKIIDVSYNSIHNIQKEF
>SP|P72823|N4C2_SYNY3/8-523
LTTMIALPLVAALFIPLIPDK..DGKQ....VRWYALGVGLADFVLMSYVFWTN.YDISST............GFQLQEK
FSWIPQ.......FGLSWSVSVDGISMPLVLLAGLVTTLS....IFAAWQ..........V..DH...........KPRL
FYFLMLVLYAAQIGVFVAQDMLLLFIMWELELVPVYLLVCIWG...........GQKRQYAAMKFLLYTAAASVFILVAA
LGLAFYGDVT.....TFDIAELGLKD..YP........IALELFLYAGLLIAFGVKLAIFPFHTWLPDAHGEASAPVSMI
LAGVLLKMGGYGLIRLNLGLLEDAHVYFAPILVILGVVNIIYGGFSSFAQD......NMKRRLAYSSVSHMGFVLLGIAS
FT............DLGISGAMLQMLSHGLIAAVLFFLAGVTYDRTHTLSLAQMGNIG.....KVMPTVFALFTMGAMAS
LALPGMSGFVSELAVFVGVSSSDI.YSTPFKTVTVFLAAVGLVLTPIYLLSMLRQLFYGNNIPPSCN......LEQDNLS
ANSDQEAVCFGTSCVLPGNAIYDDARPREVFIAACFLLPIIAVGLYPKLATQTYDATTVAVNSQV
>OMNI|NTL01NS0868/2-485
LSVLIFAPLLGALLIGLLPSG.INGRS....SRNVALIFASVTFLWSVILASQ..FQPGEV............NQQFSEF
LPWIDT.......LGLSYNLGVDGLSLPLLVLNGLLTGIA....IYSSDE..........S..LQ...........RPKF
YYSLILVLSAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWG...........GARRGYAATKFLIYTAFSGILILASF
LGLVWLSGSG.....SFALSTLNAQS..LP........LATQLLLLAGILVGFGIKMPLVPFHTWLPDAHVEASTPISVL
LAGVLLKLGTYGLLRFGMNLLPAAWNYLAPWLAAWAVVSVLYGSSCAIAQT......DMKKMVAYSSIGHMGYVLLAAAA
AT............PLSTLGAVMQMISHGLISALLFLLVGVVYKKAGSRDLDVIRGLLN..PERGMPVIGTLMIVGVMAS
AGTPGMVGFISEFIIFRG........SFAVFPVQTLLSMIGTGLTAVYFLILVNKAFFGR..................LS
A...............Q.VMNLPRIYWSDRAPAFILAVLIVIFGIQPSWLARWTEPTITAMFSVE
>OMNI|NTL01SS00856/2-485
LSLLLILPVIGALIIGFFPGN.IPAKQ....LRQITEVFAVLTLVWSLLVLFK..FDVTDP............QFQFQEY
LPWIPQ.......LGLNYSLAIDGLSLPLVILNNLLTGVA....IYSIGP..........N..VN...........RSRL
YYGLILLINAGISGALLAQNLLLFIVFYELELIPFYLMIAIWG...........GEKRGYASMKFLLYTAFSGLLVLAAF
LGMSLLSGSH.....SFDYNPEITQT..FT........ESAQTILLILILLGFGIKIPLVPLHTWLPDAYTEASPATAIL
LGGILAKLGTYGIIRFGLQLFPQTWAQFAPVLAIIGTVTVLYGALSAIAQK......DIKRMVAYSSIGHMGYILVAAAA
GT............ELSVLGAVAQMVSHGLILALLFHLVGIVERKAGTRDLDVLNGLMN..PIRGLPLTSALLITGGMAS
AGIPGLVGFAAEFIVFQG........SFPTFPIPTLLCILASGLTAVYFVILLNRTCFGK..................LD
N...............Q.RAYYPKVLASEMIPALVLTAIIFFLGVQPNYLVHWTQTTTNEMIAQL
>GP|10129703|emb|CAC08260.1/13-532
LAFLVVGPLLGAVAALLPAPPGLKGKSPEQAVLRHGVTVTGAVLLAAVVLVLGF.DHDHPS............KMQASTD
ISWIPA.......LDVRIHLGIDGISLPLLVLTALLTFLC....ALYSYL..........K..QRHERLTPRAPGPSPKA
FVALLLVLESGTLATFAVLDLILFFLAFEMVLIPMYFLIARWG...........GEGRAGAAWKFILFTLLGSVVMLLGL
LLIGITAGTFD....MVALATDNGRS..LT........TSVQVIAVLAIGLGLAVKTPMWPLHSWLPDAHTAAPTVGSVL
LAGVLLKMGTYGFIRILLPVAPEGFRIFAPYLAAFAVVGIIYGSLACLALARRGAKGDLKRLIAYSSVGHMGFVLLGVAT
MT............PTGVNGALFANIAHGLITGLLFFVVGALKDRTGTTDLDTLAEESGHALYGKAPRLGGLLAFAAVAS
LGLPGLAGFWGEMLALFGAFDPHDNLSRPAFLTFMAIAAFGTLLTAAYMLIVVRRVCMGAVP...............QEA
P.................QPKFADVRTYEFAAWTPLVALTVVAGLWPRTLLGLTDPAVQQLLSGG
>OMNI|DR1493/2-471
TNLMLYLPLLGALLVLVAP............VKWREEVAGFFAAATLGAGLWL..WRLGGE............GLSVLP.
..WVPP.......LGVTYAVELNGVGLAFALVTAFMT.......LMAVWY.........AARRVPNPG...........P
MLAMVLAMETGLLGIFAARDLILFYVFFEWALIPSLLMLAVYG...........GPHRMRALVKFAAYTLLGSLFMLLSF
IGYKWLGG.....SPTFALPDLLAHPVGG..........VAQTWLYLGFLAAMAVKLPLWPLHAWLPDFHEQNHESGIPD
VMGTLYKVGGYGIFVFGLTLFPDASLELRPVLMALAAFTALYAAWIAFGQT......NWKRLLAYAGLSHMGFVALGLFS
MN............ETAVIGAMYLLAFQNLYTGALFMAVGMLQERVGS.LDTRVGGVMN.....QAGALGGLTLALWFAS
IAVPGLAGFVGEFSILLGAYQ........VSPWLTFIAGLTTIAAAAYALTAFQKTFWEG..................RP
L................GAVRVPDLRGTEWLVLGLPLLAALFFGVYSAPVLNLMQPAVRAALSLV