HMM Seed Alignment: TIGR01961
Download Alignment>OMNI|NTL01TV1122/17-129
IKVA..KENLLALMRDLKA..QG..YNLSLTTGVD.YVDH.........IEVVYHLYNLEK......NEYIIVKTETTDN
.HVPSLTPLWNAANWDEREEYDLVGIVFDGHPYLKRLFLPEGWVG.HPLRKNYDLSK
>SP|P33599|NUCD_ECOLI/48-177
PVVWIKREQLLEVGDFLKK.LPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISID....RNRDIMLKVALAENDL
H.VPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKG.HPLRKDYPARA
>SP|Q8K9Y5|NUCD_BUCAP/45-174
PVIWINKSLLLKVGKFLSS.SPKPYNMLFDLHGVDERFRLNRLNLPEADFSIFYHLISIE....RNSDILIKVPLLKDDL
N.VSTFISLFPNANWYERETWEMFGIIFDQHPNLTHIIMPNEWKG.FPLRKDYPARA
>OMNI|HP1262/61-184
AVFWIKKDDIFSVATILR...HLGYECLSEMSAIDLCAKKG.......HFELFYQFVGFSDSCKNRRRVRVKCVLLPNES
..VDSLSFLYRSANWSEREAYDMLGIVFDKHPYLKRLIMPHDWVG.HPLLRSYPLKG
>OMNI|NTL01CJ01504/60-179
WVIEIKKEDNVKTLQMLK...TLGYLSFTEASAIDFIADKN.......GFEVFYQLLNL....EKKLRVRIKTFVGVKER
..LQSVAHVFKGANWSEREIYDMFGIFIINHPNLKRILMPDDWFG.HPLLKTYPLKG
>OMNI|NTL02LI0893/28-152
PVFFLKVEGIVSVLTALKNDPTLHYNFLNDLTAVDWLGKKEP......RFEVNYLLRSEN...KASSKIRIKVRLEDGES
..VPSITSVFKGADWPEREVYDLFGISFIGHPNLDRILMPDNFQG.HPLRKDFPLEG
>OMNI|DR1504/49-169
AAVE..AGELLHTAQQLR...ARG.FMLLDVIGVD.YSRYTAP.....RPQPFAVLYSVAHPRDHR.RLFLRVWLS.EGE
.AVDSLFPIWKAANYLEREVYDLLGIEFTGHPDLRKVLTPDDLEG.HPLRKDFPLGE
>OMNI|CC1954/29-151
LTIVARAASVIDTLTFLRDDAACRFHQLIDLTGVD.YPE......RAARFDVVYHLLSLVKNH....RIRLKVSTDEDTP
..VPSVTPVFPVADWFEREAFDMYGIFFDGHPDLRRILTDYGFHG.HPLRKDFPMTG
>SP|O68854|NUC1_RHIME/30-152
LTVTAKAENLIALLTFLRDDVQCGFVSFIDVCGVD.YPQ......RPDRFDVVYHLLSPRQNQ....RVRVKVATGENDP
..VPSATSVFPGADWFEREAYDMYGILFTGHPDLRRILTDYGFEG.YPLRKDFPLTG
>OMNI|NT01MC3463/34-156
LVVWCDPEQVVDTLRTMRDDPGMNFKLFIDVTAVH.YPK......REKPFEVVYQLLSVHKNH....RIRVKTLVDADTP
..VPSITGLWKAADWFEREMYEMFGILISGHPDLRRLLLDYDFDG.FPLRKDFPVTG
>SP|Q9K1C1|NUOC_NEIMB/29-159
ITVECLPEHYISVMTALRDHEELHFELLVDLCGVD.YSTYKNEAWQGKRFAVVSQLLSVKNNQ....RIRVRVWVSDDDF
PVVESVVDIYNSADWYEREAFDMYGIMFNNHPDLRRILTDYGFVG.HPFRKDFPISG
>OMNI|WD1122/24-146
IVIYSTLDEIEKYLFFLRDDEKCRFELLVDIFGVD.YPN......REKRFELIYNLLSIVHNI....RVHIKLQLCESDM
..PPSVAKIFSTALWFEREVFDMYGIEFSDHPDLRRILTDYGFKG.HPMLKDFPLTG
>SP|Q9ZDH3|NUOC_RICPR/27-149
LAYKIEPHFLLPFLKALKESEELRFTVLTDLFGVD.FPK......KEKRFEVVYNLLSLKLNK....NLIIKTHISEKES
..IPSAMQILSAAYWYELEVYDMYGVNFNGNNDKRRILTDYDFEG.HPLRKDFPLTG
>SP|P56896|NUC2_RHIME/30-152
YAFAVPPEQIVEFCRFLKEHPALEFDFLSDICGVDHYPE......TP.RFETVYHLYSLKNKW....RVRIKCRLGEPPH
..VPTVTGVWRTANWHEREAWDMYGIRFEGHPDLRRIYMWEGFEG.FPQRKDFPLRG
>OMNI|NTL02SC4365/109-231
FHIE..REHLVRVARTLRDDPALRFELCTGVSGVH.YPHDKGR.....ELHAVYHLRSITHN..R..LIRLEVSAPDGDP
.HIPSLVSVYPTNDWHERETYDFFGIVFDDHPALTRIMMPDDWQG.FPQRKDYPLGG
>SP|P95179|NUOC_MYCTU/94-216
LHVR..RDLLPRVAQRLRDEPELRFELCLGVSGVH.YPHETGR.....ELHAVYPLQSITHN..R..RLRLEVSAPDSDP
.HIPSLFAIYPTNDWHERETYDFFGIIFDGHPALTRIEMPDDWQG.HPQRKDYPLGG
>OMNI|NTL02SS0292/36-158
IVPD..KKIIRDVASFLK...DFGFDHVKAVTGID.YPEHE.......KLEVVYHISSYSNLDLAKIILALRTTVSYKDP
.SLPSLYSIFESAWTGERETYEMLGIRFEGHPDLRRFFLDEDFEGVYPLRKSYKIKL
>OMNI|NTL02ST2382/37-159
IQVD..KSQIVEVAGFLK...SLGFDHVKSVTAID.YPDAQ.......EFEVVYHISSYSNIDLAKTIVALRTRVKYDDP
.KLPSLYKIWESVWTGERETYEMYGIIFDGHPDLRRLFLPEDFEGVYPMRKSYKIKT
>OMNI|NTL01MM2489/31-150
AYVD..KDKAKEVCEYLKG..SLQFDHLCSVSGVD.YPQRD.......ELEAVYHIASYDHP....VVLMLKARLPRDSP
.EIESVVSVYWNANWYERETYELYGIFFKNHPELKPLVLPDDMLGEWPLRKDYEGFP
>OMNI|CT0768/45-164
LDVSKWVDIALYMRDNSL...LQ.FNYLACLSGVD.YPEEQ.......KLGIVCNLECIGKYTHK...IAVKVKCPRDGG
.SIPSVSCVWHTANWHEREAYDMYGMVFEGHPDLRRILCPEDWTG.FPLRKDYQVQE