HMM Seed Alignment: TIGR01897

Download Alignment

>OMNI|NTL01PH00169/1-404
MRVLISPWGDFRKWKVAKYTFSG..........KSLESRSTLPIMVDVIRPQE...TIIIVPDTLSSDFSSQES......
..................MWNSVKDEVKEFT...........NQLGVEDVKIIVVPGSGSFSNG......SFFGNPMDAY
M....FLLYELAKELPLE...IKEVHLDVTHGLNYLTFFTVRVVQ.E.....LLGILSI.RKGVVLKTYSSDPFVDG...
...SVRHLRVN.......LIEEATIDPKPLSEFLEGKFLVNYSMDRVEFGE.IARRLKAKELDLGRINSWIASLKHGLP.
LVFTTMYPQEGEVEGVLE............DVVAKFLEGFNVGEGK......VVRSISLGKDFGSLAKLYFQLRVLKDLK
EMYNL........PKD.EASVEELLKISEEIFTG.............................RIKHSTKVELDNVANRV
EKTEGWVK...........LSEFFKNANPQVD.......PRNFFAHAGLEANLVEVKRNGEL..................
YLRYTKGKVRWGGKEEKAE
>OMNI|NTL01PF1127/1-464
MRVLVTTWGNPFQWEPITYEYRG..........IKVKSRNTLPILVKTLEPER...ILILVADTMANYYDSGKNKPEIEE
KSFSSYSE.VVEDTKERILWHIKEEVIEELREEDPELAKKIENMLKDERITIEVLPGVGVFGNI......TVEGEMLDFY
Y....YATYKLAEWLPVQN..NLEVYLDLTHGINFMPTFTYRALR.N.....LLGLLAY.LYNVKFEIVNSEPYPLG...
...VSQEIREDTILHIR.EIGEGVVRPRPQYSPVEGKLYWN...........................AFISSVANGFP.
LVFASFYPNIRDVEDYLN............KKLEEFLVGIEVGEREDGK.PYVKREKALDRSFKNASKLYYALRVFN..T
KFQNY........PKK.EVPIEEIMEISKIFESLPRIGIILERQVEWLRNLVYGRLWYENGEQKIKKGLLEIIKDKKDKR
KEAEALKKGKTISLAEAAKLTRIFSPSGERIETIESPNVVRNFIAHSGFEYNIVYVK.......................
YDRLSDRLYFFYKDKEKAA
>OMNI|MJ1666/2-446
QKILIAPWGNFSSWKKVIYSFNG..........VEKESKSSLSAIYDKINPDK...VYILVLDTLSNLESENYG......
.................DIVKEVKEKTENFIK..........ENLNIDNYEVIVCPGVGTFYNKDFEKYFKFYGNLTDYY
S....FALYELSKRLDGD....LEVHLDLTHGLNYMPVLTYRVIK.D.....LLEILAI.KNKVRLVVYNSDPYVGR...
...EKEILNIHTVEDVI.IKPSYDIKGMTLDFLDATKFVDKKEIGKIKKEINMNPKIKELRIMKQNINAFIASIVYALP.
LVYSTFFVKKDKIEIYLN............ELIGAFISNIKINPEDK....ILKRYLYFGEGFNSLVKAYFASKIS....
EIPQL........IKD.ELSLEEIDELKNTLFKE.........................NPNSQYIKNEISSLYNIINTK
YKEEELSEILG.......NWTPIYKIRRENIDKFK....IRNFLAHAGFEKSVTEIYISVENKNGKIELSEKTSLRYNKN
YIEEKNGIKRFIFKYKDKN
>OMNI|NTL01AA00271/2-439
KKVVIAPWGDPTNWQRVKYSYND..........HEDKYPSATGIIIKAEKPDS...VILVCPDSLAEKRIPYKEIKIQCS
GNLSDKTQGNLPFENYEEIKSKVENKIKDFFS.........KNINFHKKPDVIISYSFGSYNTL......EFEGQAEDFF
AGVLKGLVYKFTEYLEKGIPEKIEIILDVSHGINYTTVMTYEAVR.T.....LAQLLAY.FTEVSLKVLNADPVIGRN..
...IQKPLRINEIEYYSSIFPNLVVYRIKKEDKECEQILEAYDDSINEIG........DN.MKLEREHIFLSAIIHGTP.
LYILTYMPSSKDLKAKID............NAAGYYEKNIIIENEIGEKKIKVKRKLRFTENYITMLKAYFLSFILE...
KKGFS........KKE.EVLLEDINKLNEMIFREFP...........................VLKHRISKETNNINERR
DNIPEDFLIYR..........EINRRGNRDFE.......ERNFFAHAGFEYNSVMLK.......................
KDDKDIILKVNEQNKEKIE
>GP|14324490|dbj|BAB59418.1/4-405
MKILFAPIGDPKNYDEVKYRIDG..........KDYPSNASFKVIKEALNMDE...TIVYAGLSLCTNSNYNDY......
....................VSCSNYISNLVK..........DKLQLNDESVIVAPNIYGDKFT......QPDGKNTLYF
D....FIYYNTLKILENEK..PDEIYIDITHGINYMPLLATDAIRLA.....TYTYLLG.RNSIDLAIFNSEPVIKG...
...YSGPYNIAN......VYSERLYVRQALLSVLMPFLSNENKNNITN.............KVLKGINNCNSDLIYSNAN
ALFSGIFPFVLLSRREIE............QCIKSVERKIKILDYNNFGIEFNTSHKPVYKDTMPIELSYLHSLLYIIEK
IIGNM........PDSSCVKISDIKDLAKRFSTS.........................ETISKLVESEIDSIEKLQNIS
DKPQLLAVIKH.........SQSSPKSICQAD.......KRNLLAHGGFEQNVVYLWR......................
..ENGEICVNYCDCIENVR
>OMNI|NTL02SS1260/2-374
ASIVFSTIGNPKGYQKVTYEIDG..........EKFESNVSVLALRDLLKVDK...TVVILGISVADVYNCKYAD.....
...................YRSCKECIIQNSK..........NDLGISESYVVAPNVYQKFK...........GKPDHYF
T....YIYYHSLRILEKEG..INEVFIDTTHGINYMGVLAKEAIQLA.....VSAYAAKSEKEVKVSLYNSDPVGKD...
...VSDTVKLH.......EIEAIKISPLSGLKYVTYQILNKDKN.....................FFNKIFSDSVNAIP.
.RFATALDNGLFIYLSEK............DSSLHLKRLEDDLSKDP...LLTPSENEINVVYKDMKYALSHALFY....
VISRF........SGN..VDLDTLRHYAETYADK.............................VTRAIIENEVDKIEKYQ
MGSERKLLG............EYMKVEGKGFD.......KRILYAHGGLPYAGTYVYK......................
..EKDKVYVTYGDKIDEIE
>OMNI|NTL04PA0080/2-467
KFLVVAPWGNPSMWRRARYRIELRHKALEGLGEGEVETCSSTKALAELLRRRG...DVKVLIFGLDTVAQPAGG......
................RTPREIAEEKYREWAR...........ALGVEG.EVVSLPGIGLFHG......WRYEGKPLHLF
N....AAFYHILKTAEELK..PSFIVVDLTHGVNYQTIAVLYAAV.......AASVLLE..KEDRLLLYNSEPYPAEYSA
ETCIKEAQRVERREGVP.QLTALDVRQLQDAVGAIRLLWALRRLAPLKIDVEIQS..PELRRRFDKVITSYRLLASGAAA
LLFPKAKFSGRAPEFYVPGEGPGAVPEPRIDIKVDPDRRVVSYGEADEMYSVAVALHYLERALDELRAEDLVSFLNRVAK
HYKEIGVTLTSIVVDTTAKQLGRMVKAAEALADKG......................VLKRIDGVIELSQLEAMVLFERS
NRALELAASWR......QALDEFAKVLSGEMERKISDRTLRNLLAHGGYSHVAVEKVV......................
..IKDKKIVEVVYNGEIVS
>OMNI|NTL01TV0117/2-398
KSIFISLWGNPERWNVTRYSFNS..........KTCESITSSRVIYENFKTDY...CIIYIPNSIYPGIYKDDTYLS...
.................QYQDLINSKLCEFLN.....SKDTESAEFYKNSNKIIFPSKGSFTADN..KNYIFDFDINYIY
S....YFYRSILNYLESVD.KINKIIVDITHGINFLEFIFLESLMYA.....LRVYALSNKIDVNIEYYNSDPYSN....
....FAILNIY.......KIKSIEIEYKNVLSIISRDFINMYRHNKKD.........IKDYFKLN.FNEDLSDYIKACS.
.IMAQSVTVPYLMYLIIN.................IYKKIYEIGSGGLEVHLNIEDNKIRQTFDNKINVNIETLAFLDTL
IKINSS......IKYDNGFKIPDIYTFTDNFFSR.........................E...SYNIFIKNELRKIKSKK
.....................EHYDFDIGNFS........RNFKAYAGLLDGLYVLK.......................
..DNSIDFKTFHFQNQKID
>OMNI|NTL01TT2439/2-469
KVIYQIGRFDKGFMKTQEFTFRQEK.......YTEVLTSFVMKKFFQKKNPQEKSMVVLIFPVSLILNESAIKEVIE...
...SNDEAIEKFKEKLERFKDMVPNTLQEYSTDP..YAFYSFHPHCKIADDFFVIHSLGGYKIFG..EYIEFNSDYNDIV
LQIFSDMAIRYLNEYNRDN.ETMEFYIDISSGHNIYISALLEAARYFSVFSGLLNWLKK.EKRPKIFLAFSDPILPG...
.TTGMKEYEIHIEELRFKTFFSSPIGEEELDNFNLARRIAGKEKELKN..........VLQKLFENFLICFSAIKNNTPL
VLYHFNFDAWEDVISFLK............D.FLEMLKRKLSGTWES......SPVLFKSDYLNTILSLGFYAGILEVLE
TKGIS......KYDYENGIALEEIKQLFASEENS.....................IYKLFGLETHIPILGREVHNLCHGG
KKKEKSILN.QAT....EEWSKVYNFIDEGKSSSFE...NRNFLAHSGFERNVTEVRK......................
..EEGKLYLRYDKSFEKKI