HMM Seed Alignment: TIGR01812
Download Alignment>OMNI|CT2042/5-567
DIVIVGGGGAGLYAAMEAMKTN.PGLNIAVLSKVYPNRSHTSAAQGGANAALA..NKAKDDTVEMHIYDTIKGSDYLADQ
DAVEVLCSEAPKIIRELDNMGTPWSRMD.....................DKTIAQRPFGGAGRP........RCCYCADK
TGHTILQTLYEQCLRKG.VFFFNEYFALALSVD.GS...RSRGLIAMNIKTGKVEAFPAKTVIFATGGYAKMYWNRSSNA
AGNTGDGQAIAYRAGIP.LKDMEFVQFHPTGLRKSGLLVTEGARGEGGYLVNALGERFMSR..YA...P......EKMEL
GPRDLVSRSLETEILEGRGFDS..PAG.KYLHLDLRHLGADLIKSRLPQIREMCMYFEGVDPIEEP.VPVRPTAHYSMGG
IDTDN....FG......RTIMEGVYAAGECGCVSVHGANRLGGNSLLDILVFGRIAGRAAAEECGKFNPS....AIPASE
VAEKEHELRSFMQPRG.HYERYGTLREELGHTLGANVGIFRDSSKIKQGIADIESLQERFR.HVRVFDTSDIYNTNLLQV
LELKNMLDLSETVAAGALAREESRGSHTRTDFP..TRDDEKWHKHTIYTYE.N....GRPKLAYKPVTMGRYE.......
.LQERTY
>OMNI|NTL01AA00426/7-571
DVVVIGGGGAGLRTAIEVAKD..PNISVALVSKVYPTRSHTGAAQGGMNAALG..NVIPDDSPEVHAYDTIKGSDFLADQ
DAVFFMTEKAPEIIYELDRWGVPFSRLP.....................DGRIAQRPFGGASFP........RTVFAADK
TGHVLLHTLFEQALARDNITFFNEYFLLDLIHD.GE...RVKGVTIYDIRNGEVLFLQAKAVVLATGGFARIYWFRSTNA
IGNTGDGQAVALRAGVP.LKDMEFIQFHPTGLAKTGILLSEACRGEGGYLLNKEGERFMKR..YA...P......DKMEL
APRDIVSRAIETEIREGRGVGE..GAR.AYVYLDLRHLGEEKIKERLPQVRQLAIDFEGVDPAKEL.VPIRPSAHYCMGG
IHVEN....YKT....SETPLKGLYAVGECACVSVHGANRLGGNSLTELVVFGKYCGMAVREFVKETDFA....PVSESE
PKKSEEFIEELMKREG.N.ESLAQVRAQMGEITWAKMGIFRDEKSLKEAYDELSELLERWN.NIPVVDKAKVFNTNLIEV
LELRNMLELARVVAYSALHRRESRGGHSREDYP..QRDDKNFLKHSLVYYDKN....GNLKLEYIPVRITKYK.......
.PEERKY
>OMNI|NT01MC4754/11-568
DLIIVGAGLAGMRAAVEAVKAG...VDVAVISKVHPLRSHSCAAQGGINAAIN..PKD...SWESHAYDTVKGSDFIGDE
DAIELMCQEAPNSVLEMDRMGTPFSRLE.....................DGLIAQRPFGAASFD........RTCYAADR
TGQVLLHTLWEQLVKA.GVRVYEECQILKIS.NVDG...RIAGVVAYDIKKGEVFGVQAKVTLLCTGGYGRVFL.TSTNA
TASTGDGMALAYRAGAS.LCDMEFVQFHPTGLRYSGILVTEGARGEGGYLINKDGDRFMTK..YA...P......NKLEL
ASRDVVSRAEQTEILEGRGVD.......GAIFLDLRHLGAQKINERLPQVRQLARDLEGVDPVYTP.IPVRPTAHYSMGG
IRTNKYGETILP..........GLWAAGESACVSVHGANRLGGNSLLDTIVFGYIAGRELGAKLG..SME...MPTLPAS
EVQAVKDNIAQLVDRPNKGVRPASIRERLGESMNAYVSVFRHPDNIQKAADLIPTLRQ.DLTTMHLDDKSKVFNVDLLRA
MEMQNLVDLAETIIAGAINRTESRGAHSRVDFP..ERDDENWRKHTITKWDN...DAQTTAFSYEAVRTVGKD.....AY
KLAVRSY
>OMNI|AF0681/4-563
DIVIVGAGIAGMRAAIAAAEKS.RKLSIALIAKTYPIRCHSVCAEGGTAAVLR..EGD...SFDLHAWDTVKGADFLADQ
DAVEFFVRECPKEIIRLENWGCPWSRNE.....................DGTIAQRPFGGHSFN........RATYAKDR
TGFHEVHTLYERMLMYDNVEIFPEYFITNLAIE.NG...AVQGVSAIQLKTGEMEFFEAKAVIFATGGAGRLYG.FTTYS
HQVTGDGLAIAYRNGIP.LKDMEFFQFHPTGLVPSGILMTEGCRGEGGYLLNKNGERFMKR..YA...P......EKMEI
APRDVVSRAMWTEIIEGRGFEG..EYG.PYIALDLRHLGEEKIEERLPLIRDAAIKFAGVDPVEEP.IPVRPVAHYTMGG
IDTN....VRCE....TA..VKGFFAAGECACVSIHGANRLGSNSTAECLVFGRVAGEVAAEYALKAKQG...KISAEFR
EKEEKRIFDELLGKSG.DESP.YQIKKELNETMEANMWIFREEKGLKEAVKKIKELKERYR.NVEINDKSRGFNTDLTSA
IEIGYMLDLAEVVAIGALKRQESRGAHYRLDYP..KRDDENWLKHTLAYYTP.....EGPKFDYKPVTITKWQ.......
.PVERKY
>OMNI|NTL02ST0550/7-566
DVVIVGAGLAGLMAAHEIASAG...YNVAVISKVFPTRSHSAAAEGGIAAYIQG.NSDPNDNPDYMAYDTIKGGDYLVDQ
DAAELLAYKSGEIVMLLERWGTLFNRQP.....................DGRVAVRYFGGQTYP........RTRFVGDK
TGMALLHTVYERTSGLGSVDFYFEWFAWELVRD.EN...RVRGIIAFDMRNMVPVFFKAKAVVIASGGMGMLYR.HSTNS
YINTGDGYAMALRARVA.LKDPEFVQFHPTALYPSDILISEAARGEGAVLRNVKGERFMAR..YA...P......KKLDL
APRDIVSRAILTEVKEGRGFPG..GY....VGLDLTHLGEDYIKERLALAYEAAKSFAGLDATKEM.IPVRPAQHYYMGG
IDVD....ITGR....NPD.LIGLFAAGEAACVSVHGANRLGSNSLLETLVFGRETGRAVVEFLKSYTEP...SSDIDKE
AEKMIDSAYDVVKSES..GIHFGEILEKLRDTMWDYVGVFRDENGLKTALSEIMKLREDMK.KMYVLDKSKVYNTEFYNA
LELKNMLDLALVIATSALNRKESRGAHYRLDFP..ERDDQNWLKHTIAYLRG.....NSVEITYKPVKMTKWK.......
.PEARVY
>OMNI|NTL01NS2965/5-575
DVIIVGGGLAGCRAAVEIARTDP.SLNVAVVAKTHPIRSHSVAAQGGMAASLK..NVDSTDTWEAHAFDTVKGSDYLADQ
DAVAILTQEAPDVVIDLEHMGVLFSRLP.....................DGRIAQRAFGGHSHN........RTCYAADK
TGHAILHELVNNLRRY.GVHIYQEWYVMRLILE.EN...EAKGLVMYSLLDGHIEVVRAKAVMFATGGYGRVYN.TTSND
YASTGDGLAMTAIAGLP.LEDMEFVQFHPTGLYPVGVLISEAVRGEGAYLINSEGDRFMAT..YA...P......SRMEL
APRDITSRAIAYEIRAGRGVNLDGSPGGPFVYLDLRHMGKEKIMSRVPFCWEEAHRLVGVDAVTQP.MPVRPTIHYCMGG
IPVNTDGRVRSS....GDGLVEGFFAAGETSCVSVHGANRLGSNSLLECVVYGKRTGAAIAQYVQKRKLP...AID.EQR
YIKQAQQEIQALLE.QPGEYRINQVRQAFQDAMTDYCGVFRTQELMSQGWQKITEIQQ.KYSQIYLDDKGSCWNTELVEA
LELRSLMIVGQTILASALNRQESRGAHFREDYP..QRDDTKFLQHTMAYYSP.....AGIDIQYRPVTITMFE.......
.PQERKY
>OMNI|NTL03PA01584/10-590
DAIIVGGGGAGMRAALQLAQGG...HKTAVVTKVFPTRSHTVSAQGGITCAIA..SADPNDDWRWHMYDTVKGSDYIGDQ
DAIEYMCSVGPEAVFELEHMGLPFSRTE.....................TGRIYQRPFGGQSKDFGKGGQAARTCAAADR
TGHALLHTLYQANLKN.GTSFLNEWYAVDLVKNQDG...AVVGIIAICIETGETVYIRSKAVVLATGGAGRIYA.STTNA
LINTGDGVGMALRAGVP.VQDIEMWQFHPTGIAGAGVLVTEGCRGEGGYLINAHGERFMER..YA...P......NAKDL
AGRDVVARSMVKEVLAGNGVG....PNKDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAP.IPVIPTCHYMMGG
VATNIHGQAITQDANGNDQIVEGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLHLEKAL.KEGID...ARGASES
DLEASFKRLNGVNE.RTSGEEVAPLKRELQSCMQNYFGVFRTGEYMQKGIAQLADLRE.RIANVKINDKSQAFNTARIEA
LELQNLLEVAEATAIAAEHRKESRGAHAREDFE..ERDDENWLCHTLYFPGE.......KRVSKRSVNFAPKT...VPAF
EPKVRTY
>SP|P31038|DHSA_RICPR/13-596
DVVVVGAGGAGLRSAFGMAKEG...LNTACITKIFPTRSHTVAAQGGISAALG..NMG.EDDWRWHMYDTVKGSDWLGDQ
DAIEYMCKNAPDAILELEHYGVPFSRTV.....................DGKIYQRPFGGMTTEYGKGKAAQRTCAAADR
TGHAILHTLYQQSLKH.KVQFFIEYFAIDLLME.DG...ECRGVVAWNLDDGSLHCFRAHNVVLATGGYGRAYF.SATSA
HTCTGDGGGMVIRAGLP.LQDMEFVQFHPTGIYSAGCLITEGARGEGGYLVNANGERFMER..YA...P......AAKDL
ASRDVVSRAMTIEIREGRGVG....EHKDHVFLHLNHLSPEILHRRLPGISETAKIFAGVDVTKDP.IPVLPTVHYNMGG
IPTNYQGQVIIKDGKNHNSIVNGIMAIGEAACVSVHGANRLGSNSLLDLVVFGRSSALKAAELI.KPASP...HKPLQKE
TLEKIINRFDKVRY.ANGNILVADLRLKMQRTMQSHVSVFRTQKLLDEGVGMISEIRN.RYKDIKINDKSLIWNSDLVEA
LELDNLLDQALVTVCSAAARKESRGAHAREDYP..DRNDRDWIKHTLSSIDD...S.GKVVLDYKPVTLTTLTDA.ISAI
PPVKRVY
>OMNI|MT3419/8-590
DVVIVGAGGAGMRAAVEAGPR....VRTAVLTKLYPTRSHTGAAQGGMCAALA..NVE.DDNWEWHTFDTVKGGDYLADQ
DAVEIMCKEAIDAVLDLEKMGMPFNRTP.....................EGRIDQRRFGGHTRDHG.KAPVRRACYAADR
TGHMILQTLYQNCVKH.DVEFFNEFYALDLALTQTPSGPVATGVIAYELATGDIHVFHAKAVVIATGGSGRMYK.TTSNA
HTLTGDGIGIVFRKGLP.LEDMEFHQFHPTGLAGLGILISEAVRGEGGRLLNGEGERFMER..YA...P......TIVDL
APRDIVARSMVLEVLEGRGAG....PLKDYVYIDVRHLGEEVLEAKLPDITEFARTYLGVDPVTEL.VPVYPTCHYLMGG
IPTTVTGQVLRD....NTSVVPGLYAAGECACVSVHGANRLGTNSLLDINVFGRRAGIAAASYA..QGHD...FVDMPPN
PEAMVVGWVSDILS.EHGNERVADIRGALQQSMDNNAAVFRTEETLKQALTDIHALKE.RYSRITVHDKGKRFNTDLLEA
IELGFLLELAEVTVVGALNRKESRGGHAREDYP..NRDDVNYMRHTMAYKEIGADKEGPELRSDVRLDFKPVVQTR...Y
EPKERKY
>SP|P00363|FRDA_ECOLI/6-580
DLAIVGAGGAGLRAAIAAAQAN.PNAKIALISKVYPMRSHTVAAEGGSAAVAQ..DHD...SFEYHFHDTVAGGDWLCEQ
DVVDYFVHHCPTEMTQLELWGCPWSRRP.....................DGSVNVRRFGGMKIE........RTWFAADK
TGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVD.DG...HVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYR.YNTNG
GIVTGDGMGMALSHGVP.LRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMEL
GPRDKVSQAFWHEWRKGNTIST..PRG.DVVYLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEP.IPVRPTAHYTMGG
IETD....QNCE....TR..IKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERAATAGNGNE..AAIEAQ
AAGVEQRLKDLVNQDG..GENWAKIRDEMGLAMEEGCGIYRTPELMQKTIDKLAELQERFK.RVRITDTSSVFNTDLLYT
IELGHGLNVAECMAHSAMARKESRGAHQRLDEGCTERDDVNFLKHTLAFRDAD....GTTRLEYSDVKITTLP.......
.PAKRVY
>SP|P17412|FRDA_WOLSU/7-597
DSLVIGGGLAGLRAAVATQQKG...LSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDNEDLHFMDTVKGSDWGCDQ
KVARMFVNTAPKAIRELAAWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGLIHSRDFGGTKKW........RTCYTADA
TGHTMLFAVANECLKL.GVSIQDRKEAIALIHQDGK....CYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYK.NTTNA
VVCEGTGTAIALETGIAQLGNMEAVQFHPTPLFPSGILLTEGCRGDGGILRDVDGHRFMPD..YE...P......EKKEL
ASRDVVSRRMIEHIRKGKGVQS...PYGQHLWLDISILGRKHIETNLRDVQEICEYFAGIDPAEK.WAPVLPMQHYSMGG
IRTDYRGEAK..........LKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCANTQVD..LETKTLEK
FVKGQEAYMKSLVE.SKGTEDVFKIKNRMKDVMDDNVGIFRDGPHLEKSVKELEELYK.KSKNVGIKNKRLHANPELEEA
YRVPMMLKVALCVAKGALDRTESRGAHNREDYP..KRDDINWLNRTLASWPNPE..QTLPTLEYEALDVNEMEIA.....
.PRYRGY