HMM Seed Alignment: TIGR01776
Download Alignment>GP|994791|emb|CAA90896.1/1-898
................MKNKLNLISLALLSLFAVQSY...................AEQAVQLNDVYVTGTKKKA.HKKE
NEVTGLGKVVKTPDSLSKEQVLGMRDLTRYDPGISVVEQGRGATTGYSIRGVDRNRVGLALDGLPQIQSYVSQYSRS...
...SSGAINEIEYENLRSIQISKGASSSEFGSGSLGGSVQFRTKEVSDIIKPGQSWGLDTKSAYSSKNQQWLNSLAFAGT
HNGFESLVIYTHRDGKETKAHKDAESRSKS.IQRVDLADN......NPQ....GSNWFKVKNDCPSLNCEPRQQVGVSYD
GQ..........................KYITEQLSAKEYTGEERALPDPVKYKSDSWLVKLGYSLSPKHYVAGVYEHSK
QRYDTRDMTYPAYWQLSDLKNGDKWYPMNNAKGLYRDNALDGVAIDYFTEDGVKSSKG.........LRWAKARFIDEWH
TRDRLGALYRYTNQD.GNRLIDRLSLSFDQQKINLSTRLRENNCSEYPTIDKNCRATLDKLWSSTKNEQSSYEEKHDTIQ
LSLDKTVQTGLG....KHQLNMLLGS.DRFNSTLKRHEILSEFSVGTWHRIRGNGY........................
................................................KDTP.........YIYELK.............
................................DQAIYSKNECDYSG..TIAGRADCATSKIKGHNHYIALRDNFAITKYL
DIGLGYRFDKHKFR..........STHRWANQGDYKNSAWNIGIVAKPTSFLSLSYRASSGFRVPSFQELFGLRYDGAMK
GS...........SDAYQKTEKLSPEKSLNQEVAATFKGDFGVVEVSYFKNDYKQLIAPA..ER..........MHQTQS
MIN...........YFNVQDIKLDGINLIGKLDWNGVFDKIPEGIYTTLAYSKMRVKEVKNYQGYMN.....IRSPLLDT
IQPARYVVGVGYDQPDEKWGVNLTMTHSSGKNPNELRGNEQVGFAN.YERTATKKRTRSWHTFDLTGYITPWKHTTVRAG
VYNLMNYRYTTWESV.....RQSSLNAIHQHTNVK...DYARYAAPGRNYVVSFEMKF
>GP|2731434|gb|AAB93473.1/1-930
.............MIMKYHHFRYSPVALTVLFALSHSY.......GAATENKKIEENNDLAVLDEVIVTESHYA..HERQ
NEVTGLGKVVKNYHEMSKNQILGIRDLTRYDPGISVVEQGRGASSGYAIRGVDKNRVSLLVDGLPQAHSYHTLGSDA...
...NGGAINEIEYENIRSIELSKGASSAEYGSGAHGGAIGFRTKDAQDIIKEGQHWGLDSKTSYASKNSHFLQSIAAAGE
AGGFEALVIATHRHGKETKIHSEANKLKHN.IRRITGFENRYDFTQIPHRMLLEDLLLIVEDTCPTLDCTPRARVKLNRD
NFPVRTFPE.......YTPEERKQLEQIPYRTEQLSAQEYTGKDRIAPNPLDYKSNSVFMKFGYHFNSSHYLGAILEDTK
TRYDIRDMQTPAYYTKDDINLSLRNYVYE......GDNILDGLVFK......PRIPYG.........LRYSHVKFFDERH
HKRRLGFTYKYKPEN..NRWLDSIKLSADKQDIELYSRLHRLHCSDYPVVDKNCRPTLDKSWSMYRTERNNYQEKHRVIH
LEFDKALNAGQGVFNQTHKLNLGLGF.DRFNSLMDHGDMTAQYTKGGYTSYRGRGR........................
................................................LDNP.........YIYRRD.............
................................PRSIETVSLCNN....TRGDILNCEPRKIKGDSHFVSFRD.LVISEYV
DLGLGVRFDQHRFK..........SDDPWTLSRTYRNWSWNGGITLKPTEFVSLSYRISNGFRVPAFYELYGKRDHIGLK
DNE.........YVQRAQRSHQLEPEKSTNHEIGVSFKGQFGYLDVSYFRNNYKNMIATA..CKRI........IQKSHC
FYN...........YHNIQDVALNGINLVAKFDLHGILSMLPDGFYSSVAYNRVKVKERKLTDSRLDS....VNDPILDA
IQPARYVLGFGYDHPEEKWGIGITTTYSKAKNADEVAGTRHHGIHR.VDLGG..KLTGSWYTHDITGYIN.YKNYTLRGG
IYNVTNRKYSTWESV.....RQSGVNAVNQDR.GS...NYTRFGAPGRNFSLAFEMKF
>SP|Q06987|TB12_/1-908
..............MQQQHLFRLNILCLSLMTALP............VYAENVQAEQAQEKQLDTIQVKAKKQK..TRRD
NEVTGLGKLVKSSDTLSKEQVLNIRDLTRYDPGIAVVEQGRGASSGYSIRGMDKNRVSLTVDGVSQIQSYTAQAALGGTR
TAGSSGAINEIEYENVKAVEISKGSNSSEYGNGALAGSVAFQTKTAADIIGEGKQWGIQSKTAYSGKDHALTQSLALAGR
SGGAEALLIYTKRRGREIHAHKDAGKGVQS.FNRLVLDEDKKEGG..SQ.....YRYFIVEEECHNG.YAACKN......
.................KLKEDASVKDERK...TVSTQDYTGSNRLLANPLEYGSQSWLFRPGWHLDNRHYVGAVLERTQ
QTFDTRDMTVPAYFTSEDYVPGSLK....GLGKYSGDNKAERLFVQ....GEGSTLQG.........IGYGTGVFYDERH
TKNRYGVEYVYHNAD.KDTWADYARLSYDRQGIDLDNRLQQTHCS.HDGSDKNCRPDGNKPYSFYKSDRMIYEESRNLFQ
AVFKKAFDTAKI....RHNLSINLGY.DRFKSQLSHSDYYLQNAVQAYDLITPKKP..PFPN......GS..........
................................................KDNP.........YRVSIG.............
................................KTTVNTSPICRFGN...NTYTDC.TPRNIGGNGYYAAVQDNVRLGRWA
DVGAGIRYDYRSTH..........SEDKSVSTGTHRNLSWNAGVVLKPFTWMDLTYRASTGFRLPSFAEMYGWRAG....
...............ESLKTLDLKPEKSFNREAGIVFKGDFGNLEASYFNNAYRDLIAFG.YETRTQN.....GQTSASG
DPG...........YRNAQNARIAGINILGKIDWHGVWGGLPDGLYSTLAYNRIKVKDADIRADRTF.....VTSYLFDA
VQPSRYVLGLGYDHPDGIWGINTMFTYSKAKSVDELLGSQALLNGNANAKKAASRRTRPWYVTDVSGYYNIKKHLTLRAG
VYNLLNYRYVTWENV.....RQTAGGAVNQHKNVG...VYNRYAAPGRNYTFSLEMKF
>GP|23332891|gb|AAN27377.1/1-1074
....MNQSKQNNKSKKSKQVLKLSALSLGLLNITQVALAN.....TTADKAEATDKTNLVVVLDETVVTAKKN...ARKA
NEVTGLGKVVKTAETINKEQVLNIRDLTRYDPGIAVVEQGRGASSGYSIRGMDKNRVAVLVDGINQAQHYALQGPVAGKN
YAAG.GAINEIEYENVRSVEISKGANSSEYGSGALSGSVAFVTKTADDIIKDGKDWGVQTKTAYASKNNAWVNSVAAAGK
AGSFSGLIIYTDRRGQEYKAHDDAYQGSQS.FDRAVATTDPNN............RTFLIANECANGNYEACAAG.....
................GQTKLQAKPTNVRD...KVNVKDYTGPNRLIPNPLTQDSKSLLLRPGYQLNDKHYVGGVYEITK
QNYAMQDKTVPAYLTVHDIEKSRLSNHAQANGYYQGNNLGERIRDT....IGPDSGYG.........INYAHGVFYDEKH
QKDRLGLEYVYDSKG.ENKWFDDVRVSYDKQDITLRSQLTNTHCSTYPHIDKNCTPDVNKPFSVKEVDNNAYKEQHNLIK
AVFNKKMALGST....HHHINLQVGY.DKFNSSLSREDYRLA.THQSYEKLDYTPPSNPLPDKFKPILGSNNKPICLDAY
GYGHDHPQACNAKNSTYQNFAIKKGIEQYNQKTNTDKIDYQAIIDQYDKQNPNSTLKPFEKIKQSLGQEKYNKIDELGFK
AYKDLRNEWAGWTNDNSQQNANKGTDNIYQPNQATVVKDDKCKYSE..TNSYADCSTTAHISGDNYFIALKDNMTINKYV
DLGLGARYDRIKHK..........SDVPLVDNSASNQLSWNFGVVVKPTNWLDIAYRSSQGFRMPSFSEMYGERFGVTIG
KGTQHGCKGLYYICQQTVHQTKLKPEKSFNQEIGATLHNHLGSLEVSYFKNRYTDLIVGKSEEIRTLTQGDNAGKQRGKG
DLG...........FHNGQDADLTGINILGRLDLNAVNSRLPYGLYSTLAYNKVDVKGKTLNPT.LA.....GTNILFDA
IQPSRYVVGLGYDAPSQKWGANAIFTHSDAKNPSELLADKNLGNGNIQTKQATKAKSTPWQTLDLSGYVNIKDNFTLRAG
VYNVFNTYYTTWEAL.....RQTAEGAVNQHTGLSQDKHYGRYAAPGRNYQLALEMKF
>SP|Q06379|LBPA_/1-943
..............MNKKHGFPLTLTALAIATAFP.........AYAAQAGGATPDAAQTQSLKEITVRAAKV...GRRS
KEATGLGKIVKTSETLNKEQVLGIRDLTRYDPGVAVVEQGNGASGGYSIRGVDKNRVAVSVDGVAQIQAFTVQGSLSGYG
GRGGSGAINEIEYENISTVEIDKGAGSSDHGSGALGGAVAFRTKEAADLISDGKSWGIQAKTAYGSKNRQFMKSLGAGFS
KDGWEGLLIRTERQGRETRPHGDIADGVEYGIDRLDAFRQTYDIKRKTR.....EPFFSVEGERESKPVAKLAGYGKYLN
NQLNRWVKERIEQNQPLSAEEEAQVREAQARHENLSAQAYTGGGRILPDPMDYRSGSWLAKLGYRFGGRHYVGGVFEDTK
QRYDIRDMTEKQYYGTDEAEKFRDK.....SGVYDGDDFRDGLYFV....PNIEEWKGDKNLVRGIGLKYSRTKFIDEHH
RRRRMGLLYRYENEAYSDNWADKAVLSFDKQGVATDNNTLKLNCAVYPAVDKSCRASADKPYSYDSSDRFHYREQHNVLN
ASFEKSLKNKWT....KHHLTLGFGY.DASK.AISRPEQLSHNAARISESTGFDEN........................
................................................NQD...........KYLLG.............
................................KPEVVEGSVCGYIE..TLRSRKC.VPRKINGSNIHISLNDRFSIGKYF
DFSLGGRYDRKNFT..........TSEELVRSGRYVDRSWNSGILFKPNRHFSVSYRASSGFRTPSFQELFGIDIYHDYP
...............KGWQRPALKSEKAANREIGLQWKGDFGFLEISSFRNRYTDMIAVADHKTKLPN...QAGQLTEID
IRD...........YYNAQNMSLQGVNILGKIDWNGVYGKLPEGLYTTLAYNRIKPKSVSNRPG.LS.....LRSYALDA
VQPSRYVLGFGYDQPEGKWGANIMLTYSKGKNPDELAYLAGD.....QKRYSTKRASSSWSTADVSAYLNLKKRLTLRAA
IYNIGNYRYVTWESL.....RQTAESTANRHGGDS...NYGRYAAPGRNFSLALEMKF
>GP|3414688|gb|AAC31366.1/1-1000
MSKSITKTQTPSVHTMTTHRLNLAIKAALFGVAVLPLSVWAQENTQTDANSDAKDTKTPVVYLDAITVTAAPSAPVSRFD
TDVTGLGKTVKTADTLAKEQVQGIRDLVRYETGVSVVEQGRGGSSGFAIHGVDKNRVGITVDGIAQIQSYKDESTKRAG.
..AGSGAMNEIEIENIAAVAINKGGNALEAGSGALGGSVAFHTKDVSDVLKSGKNLGAQSKTTYNSKNDHFSQTLAAAGK
TERVEAMVQYTYRKGKENKAHSDLNGINQS.LYRLGAWQQKYDLRKPNE..LFAGTSYITESCLASDDPKSCVQYPYVYT
KARPDGIGNR..NFSELSDAEKAQYLASTHPHEVVSAKDYTGIYRLLPDPMDYRSDSYLARLNIKITPNLVSKLLLEDTK
QTYNIRDMRHCSYHGARLGNDGKPAN...GGSIVLCDDYQEYLNAN...DASQALFRPGANDAPIPKLAYARSSVFNQEH
GKTRYGLSFEFKPDT...PWFKQAKLNLHQQNIQIINHDIKKSCSQYPKVDLNCGISEIGHYEYQNNYR..YKEGRASLT
GKLDFNFDLLG.....QHDLTVLAGA.DKVKSQFRANNPRRTIIDTTQGDAIIDES........................
.............................................TLTAQEQ.........AKFKQS.............
...............................GAAWIVKNRLGRLEEKDACGNANECERAPIHGSNQYVGINNLYTPNDYV
DLSFGGRLDKQRIH..........STDSNIISKTYTNKSYNFGAAVHLTPDFSLLYKTAKGFRTPSFYELYNYNSTAAQH
KNDP........DVSFPKRAVDVKPETSNTNEYGFRYQHPWGDVEMSMFKSRYKDMLDKAIPNLTKAQQEYCKAHLDSNE
CVGNPPTPKTSDEVFANLYNATIKGVSVKGKLDLHAMTSKLPDGLEMTLGYGHTKLGKFDYIAPKDADGWYQARPAFWDA
ITPARYVVGLNYDHPSQVWGIGTTLTHSKQKDENELSALRIR.NGKRETQTLTHTIPKAYTLLDMTGYYSPTESITARLG
INNVLNTRYTTWEAA.....RQLPSEAASSTQS.......TRYIAPGRSYFASLEMKF
>GP|13027667|gb|AAG15587.1/1-777
MLTLVFSVIRRSFMKFKYCVIHQLVLSGSLIFPTLSF..........ADSDSTKTTPNKASYLEEISVVATTVQ..HIFS
ST........QSTEQLRKNMVSNERDLFRYEVGIGVPESGRSGSNGFAIRGVDKDRVAVIVDGIPQAESTISTSARYSTE
R..HNGNINNIEYENVSSLKVQKGAASVMYGSGALGGTVEFTTKDIEDFVEPGRHLGFLSKTGYTSKNREYRQVIGVGGK
GEHFFGFVQLTKRWGHETINNGKG........................................................
..................................T...DILGEHQGKPNPLNYYTTSWLTKVGYDINNTHRFTLFLEDRR
E....KKLTEEKTLGLSDAVR.....................................................FANDQT
PYLRYGIEYRYNGLS....WLETVKLFLAKQKIEQRSALQEF........DINNRNKLDSTMSFVYLQR......QNIAR
GEFSTSPLYWGP...SRHRLSAKFEFRDKFLENMNKHFTFRPWQIN..................................
..............................................................TFRQQ.............
..................................................GRNNYTEVFPVKSREFSFSLMDDIKIGELL
HLGLGGRWDHYNYKPLLNSQHNINRTQRLPYPKTSSKFSYQLSLEYQLHPSHQIAYRLSTGFRVPRVEDLYFEDRGKSSS
...............QFLPNPDLQPETALNHEISYRFQNQYAHFSVGLFRTRYHNFIQER..EMTCDKIPYEYNRTYGYC
THN.......TYVMFVNEPEAVIKGVEVSGAL..NGSAFGLSDG....LTF.RLKGSYSKGQNHDGDP.........LKS
IQPWTVVTGIDYETEG..WSVSLSGRYSAAKKAKDAIETEYTHDKKVVKQWP..HLSPSYFVVDFTGQVNLSKNVILNMG
VFNLFNRDYMTWDSAYNLFTRGYTSRSVRANSPG.....INRFTAPKRNFAASVEIRF