HMM Seed Alignment: TIGR01746
Download Alignment>GP|1171129|gb|AAC44129.1/2223-2588
SVLLTGATGYLGAFLLEQLLKR...TRATVYCLVR.AADPAQAMDRVRATMH...QYLVWDEAYA..ERIRPLVGDLGKP
RLGLSREEWERLG....LELDSIYHNGALVNFVYPYSALRGPNVHGTQEVLRLGCQHRLKA.VHYVSTIDVLLATHMPRP
F...........MEDDAPLRNPIEVPG..GYTGSKWVAEKVVNIARAR....GIPVCIYRPGLILSH.EETGATQTN.DY
LLVAFRGYVPMG......IIPDYPR....IFD.TIPVDYAAKAIVHISTQREA.L...GRFFHLFN..PAPVSLRRFCDW
I.RSYGYAFD.I.VPFDEARRQALDVDTSH..P..LYPLVPLIRDAEAE.....PQESLDPAFIDQLRPDLECRSAVEVL
AGSDIRCPPMTEELAHRCLQYLVDIGFL
>GP|14210837|gb|AAK57184.1/1150-1509
TILLTGATGFLGAFLLEELCRR...TDARIYCLVR.SKTEQEGMNRIRKNLE...SYSLWNEALA..PRIVPVRGDIGQP
LLGLSEKEFQRLS....EEIDAIYHNGALVNFLYPYESMRAANVLGTREILRLATRTRIKP.LHYVSTVSVLPLGRKAP.
............IREDEPLEGPSSLVG..GYAQSKWVAEKLVREASRR....GLPVTILRPGRVTGH.SRTGAWNTD.DL
VCRTLKGCVRMG......VAPSVDA....LLD.LTPVDYVSSAIVDLSMRPES.I...GQTYHLVN..PQFVRADEMWNY
M.RAFGYGLR.V.LPYDQWLSELGSAASSD..SE.LGDLLMFLQQVPPE.....DRSVGGPRMV.....VCDSGDTLKAL
GGTGTSCPSVDASLISTYLSSLVHRGFL
>GP|11127899|gb|AAG31130.1/1094-1449
QVLLTGATGFVGAHLLDQLLRQ...TQAKVVCLVR.ARDEAHAMERLREAMT...SQRLSTASLS..ERVLALPADLGQP
WLGLSSARFHGLA....AECDMILHNAAVVSVVREYGSLQATNVRGTRELLRLAASVRPKP.LHYVSTLAVAPQANLSP.
............EVPEAFVPAHPGLRD..GYQQSKWAAERLVEQASER....GLPVTVYRLGRVSGA.LDSGIVNPQ.DL
VWRILLAGIPAG......ALPQLDV....GEV.WTPVDYVARALVRLSLVPRP.....GTVFNLTP..APEVRLSEVFGW
V.QDYGYPVA.L.CPVPEWRTRVAQSTG.S..AE.NSTTLAFFDLRAG.........AAEPTFG...LGTIRSERVLQAL
SDTGISCPRTDRPLLHRYLDYCVGQGLL
>OMNI|NTL01ATA1181/1145-1507
HVFLTGATGFLGTYLLHELLRD...PERKVTCLVR.GDD...GMSRLRQAFR...QYDLPQSVLT..ERVTIVTGELSKP
GLGLAAADYDNIV....RNADCIFHNGAEVHHLHRYERLRETNVLGIREILQLACAGEGRH.VHYISTLSALTPRRGSGG
DPR........PVCELESVEGFVPPAG..GYNRSKWVAEHLVNEAGRR....GLPVTIYRPGAISGD.SVTGAFNGS.DI
LCRLVQAYLYTG......TAPEGER....LLD.MLPVDHVARAIVHLSGKPAS.A...GQVFHLIH..SSPVSSARLFEA
C.ELEGIELK.R.VSQREWQDMLGDVARGTPDHP.LYPLLGLLRSPSAA.....GKSDEKQTRN......FDCHLTQAAL
SDAPFREPALTFELLRTYLRAFAKANFL
>OMNI|NTL03PA04078/620-991
HILLTGASGLMGAHLLAELLAS...READLHCPVR.AQNDAHALERLRQAAR...QHRIELAETDW.RRVRAYAADLAEP
GFGLPAETYRELA....GSVDQVFHSASAVNFIQPYSYMKRDNVEGLGQVLRFCASGRCKP.LMLLSSISVYSWGHLHTG
KRL........MREDDDIDQNLPAVVTDMGYVRSKWVMEKIADLAAER....GLPLMTFRLGYATCH.SRTGAYADY.QW
WSRLARTCLEYR......AVPLLRE....LREGLTTVDYMVEAISVIARQPSA.L...GKKFNLVPSIPRCLTLDEFFGR
LGRRAGRPLR.Q.MPFDDWVSLWEDNRD....AP.LYPLLSMFRDNMYA.....GRSTVELYQD...TYLWDCTNVEEHL
RGSAVREPEFDDRLLDLYLAGLGGSAMR
>ORF04279/793-1149
KVIVTGANGFLGVHIVEALLNWG...TTEIACLVR.ETPEQSAQQRFEYALR...ENRLDHLDLS...RVKVYPADVTRP
RLGLDDAVYERLD....LEFGVLVHNAANVNHVQDYETLARDNVAPVFECLKLCEGRSKKI.FNFVSTLSACSAIDAAG.
..........NVLEQPAAATPPIYIKN..GYNLSKWVAERVLQRARDQ....GVWVNIYRPGNIAFN.SVTGVCQPQKNR
LMLMLKGSLQLG......QVPQFPIN.....FDLMPVDFLARFIGFHASRYQPER....AVFNLHNPEP..LSWNNYVEA
FRE.AGRDFE.L.VSVEQWQAQLGRVDSQN.......ALFGVLGFYLDG.........FEEDIG..DISMIEYQNTQSGV
RCMGEQYPQKTPALLRKGCDYLKEIDFI
>GP|1405772|emb|CAA98937.1/2109-2512
TVLLTGATGFLGRYLVLELLRRLD.VDGRLICLVR.AESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEP
DLGLDQPMWRRLA....ETVDLIVDSAAMVN.AFPYHELFGPNVAGTAELIRIALTTKLKP.FTYVSTADVGAAIEPSAF
TED......ADIRVISPTRTVDGGWAG..GYGTSKWAGEVLLREANDLC...ALPVAVFRCGMILADTSYAGQLNMS.DW
VTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDW
LIE.AGYPIRRI.DDFAEWLQRFEASLGALPDRQRRHSVLPMLLAS..NSQRLQPLKPTRGCSAPTDRFRAAVRAAKVGS
DKDNPDIPHVSAPTIINYVTNLQLLGLL
>SP|P40976/1006-1384
TVFLTGANGYLGVFILRDLMTR..SSNLKVIALVR.ASSEEHGLKRLKDSCT...AYGVWDESWAQ..KISVVNGDLALE
NWGIEERKWNKLT....EVVDYVIHNGALVHWVYPYSKLRGPNVMGTITALKLCSLGKGKS.LSFVSSTSTVDTEYYVNL
SNEITSKGGNGIPESDPLQGSSKDLHT..GYGQSKWVSEYLVRQAGLR....GLRGVVVRPGYILGD.SKSGAINTD.DF
LVRMVKGCIELG......LYPNINN.....TVNMVPADHVARVVTASAFHP..EQ..GVIVAHVTSHPR..LRFNQFLGT
LST.FGFNTK.L.SEYVNWRIALERFVINESHDS...ALYPLLHFVLDN....LPANTKAPELDDTNTREILKRDA.SWT
NVDVSNGAAILEHEMGLYLSYLVAIGFL
>GP|13242206|gb|AAK16599.1/1236-1588
IVFLTGATGFLGQEILRQLICNN..AIASIITLVR.AKSPDHGLDRIRETAK...IAGWWQENYTS..KIEIWCGDLSKK
RMGLSDVQWARLAGQSSNNVDAIVHNGAIVNWNADYDKMRAANVDSTVDLLKATVNSAASPKFIFVSGGIKSDP......
............TTDRTILAQYLGNIT..GYTQTKFVSEGIIQEIINTLPADQNRISTLKPGRIIGS.PETGVANVD.DM
LWRVVSTAASLR......VYPAEPE......EHWVSVADVTTVASSVLSQLYAKEG.IAPFVSVAGG....MPATIFWDI
INK..ELDVPCEPLSPDEWTHRALESMNEVGDKH...PLWPVQHFLG......................NLGSVRTAKEV
ETEG.IEHGQWHMAVKMSMRYLMKIDFI
>GP|3218392|emb|CAA19582.1/648-980
..LLTGATGYFGRRFLEYLVKLN....ISVVCLVR.ESSDEAAKERLISLVP...SLRISSEN......IIVWAAHVEEI
RFGLDDAKWEFLV....ENVSRIYHMAAEVHWMKSYQELRPANVLGTKTVLELSVMGPKA..LYFISGGGQQE.......
...........VELDDDTQSAKAS.....GYALSKYVAELLCRKISDLG...HPLIYVIRPGFIIAN...DGEILSR.DF
FWRFVATALRMG......IWPQSDE....SQSLVFHISTTDALCMTLTQILEKEADAYAPLLAYDK.....FDGDEFACI
CES..MKNVKLDFVTLEDWLKALEKDVDEKGED...HPLFALQHAT.......................KFALKSSMTPS
NGLRNIYPLSETFLTKEAIANGLENLYI
>OMNI|SA0164/2046-2390
NTLLTGATGFLGAYLIEVLQGYSH..R..IYCFIR.ADNEEIAWYKLMTNLN...DYFSEETVEIMLSNIEVIVGD....
...FECMDDVVLP....ENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHAR..LIYVSTISVGTYFD....
IDT......EDVTFSEADVYKGQLLTS..PYTRSKFYSELKVLEAVNN....GLDGRIVRVGNLTN..PYNGRWHMR.NI
KTNRFSMVMN......DLLQLDCIG....VSMAEMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNK..MPVKSLLEC
VKR.KEIELVSD.ESFNEILQKQDMYETIGLTSVDREQQLAMIDTT........................LTLKIMNHIS
EK....WPTITNNWLYHWAQYIKTIFN.
>OMNI|NTL01ML2004/1063-1401
AIVVLGASGILGTGFAQAVLDLR...QSGVLCPEVVLATR....ARLPEGDP...WTALQGVDGVRIERISFENGP....
....GELEALIRD....TDAGTLVNGVGNTNMLVPYRELRLANVELVSAIVDICASYSTR..LVHLSSFVVNADVTVP..
............QVTDPRETPYP.......YAASKSLAELVVAGSPSA.....LDFTIVRLPRVLG..EDYQLRNSS.DI
LLSIVDACIALR......AYPSATV.....TEEVTTGRAAAKAILGVVSALARSGQLGSGISVVRG...EAVAYADFLSE
FAS...DELN.....MAEWKYRLDQSDWAKRNPR.RWSVIDAWFTLG........MMFEMRSYAEYPTMALGVESVAELA
AP....PESIRALLAHGCSQPLKYTGR.