HMM Seed Alignment: TIGR01739
Download Alignment>GP|9931980|gb|AAB51507.2/81-1278
RVVSFGYGPNINHRPTTLSTELG..VLLRELGLQEWAR.......VEVGRHLVSKITQTLLEP....HPPQFIRAFTQNT
DLVPYEG...........LEVPE...GPQPVARPHIEDDVIMQAVMISLGADLLPLAVQAST...........GDNYNVA
RYFVIPGRCTMERWPWNCARQAFGIHGAYTHVHSSVQ.RGI.RGLGNLLFHSTLFPGGQTQGALTGLYATGP....ALGP
.RAHSRFRRIF.AKDVQQAEMLQGAGVPTLGGFLKTVR...TIATTPGNALAVCSISTTTSKECISLRRMIPQQ......
TVVCLGRFEPTDGPDTY.P.NLYRDSSDNAVRILETLELVQRLAKG..PIFSGLNRSHDPAPVVRHLQALAP.RTGLELF
VSKLPDEVRAHLPADPAAGPD..AVEAAVAEHFLNVYCSLVFAVVAESG...AVPGD.LGETPLEVLQRAARLCACQITV
LGRTSEQPGIRIVDDLTGETT.RVFSVDQPSSTPPSPWLAL......S..DGVRVSG.....HPEDVDWGLFA.TGSTIH
QLLRHATVGSKEFFTRHMDRCSNGLIAQQAGVGPLDIPVSDYHLVLH...SSMLA...ERVAPRVPDTVEAITPSMANLL
HKDFETWVKALPQ..........ELLPVPAWRGQAMAMGEQAYKMATNVSTGATYAITEALTNLMFSPVSK.LQDVVLTG
AVAWSPEDHQAGLLQECLFACKEFCRELGVALSISSAASSPTLSERHVRITQQQETVEVLPFNSVVFTSWAEVKG.SRYR
VTPDVKVEGNALVYLAVNQSCLIAGSTFEHNFLASR..HPIPPLNPSTVASLFMLVKYLMSKRLIVSGHDIGDGGLLPSA
IEMALAGCRGLQLSLP.AHPNPLELMVSETPGALVEVPQVHLSEVLRAARDYRCVAHPLGTVGPEGQGNNVTVLQNETVV
FQETLTSLQVSWTSFSDEMWNLVTPPLHPLEDMHRKDLGRLEHHLGSLRAMCLGSQLRLFSCPTSPR..RVAALVLPGSS
APYALMAALQNTGFEVATVTVEELKRGQS......LSGFSGLITCLRTGCQASYASARGWVLALCNDP...TCASTLTEF
LNRPDTFSICCGEVGFQLLVALGVVGRSESSPYTYGPTPPQR.....WAVNLETNVSKLYDSHWLNIQIPQNTKSVFLRV
LRGTVLPSWAQGEYLGVRYEQDALEYILRQRGEITLTYHGNAADETLPARHYPRNPTGNSTVAGLTSSDGRHAALIIDPS
LMFHPWQWQHVPPDL.TPLSMSPWAMAFQSIYLWSVK
>SP|P03179|VP14_EBV/111-1312
NNYVYAYGPDWMARPSTWSAEIQ..QFLRLLGATYVLR.......VEMGRQFGFEVHRSRPSFR...QFQAINHLVLFDN
ALRKYDSGQVAAG.....FQRALLVAGPETADTRPDLRKLNEWVFGGRAAGGRQLADELKIVS..........ALRDTYS
GHLVLQPTETLDTWKVLSRDTRTAHSLEHGFIHAAGTIQANCPQLFMRRQHPGLFPFVNAIASSLGWYYQTA....TGPG
ADARAAARRQQAFQTRAAAECHAKSGVPVVAGFYRTINAT.LKGGEGLQPTMFNGELGAIKHQALDTVRYDYGH......
YLIMLGPFQPWSGLTAP.P.CPYAESSWAQAAVQTALELFSALYP..APCISGYARPPGPSAVIEHLGSLVP.KGGLLLF
LSHLPDDVKDGLGEMGPARATGPGMQQFVSSYFLNPACSNVFITVRQR.....GEKI.NGRTVLQALGRACDMAGCQHYV
LGSTVPLGGLNFVNDLASPVS.TAEMMDDFSPFFTVEFPPIQEE...GASSPVPLDVDESMDISPSYELPWLS.LESCLT
SILSHPTVGSKEHLVRHTDRVSGGRVAQQPGVGPLDLPLADYAFVAH..............SQVWTRPGGAP..PLPYRT
WDRMTEKLLVSAK..........PGGENVKVSGTVITLGEQGYKVSLDLREGTRLAMAEALLNAACAPILD.PEDVLLTL
HLHLDPRRADNSAVMEAMTAASDYARGLGVKLTFGSASCPETGSSASN.............FMTVVASVSAPGEF.SGPL
ITPVLQKTGSLLIAVRCGDGKIQGGSLFEQLFSDVATTPRAP..EALSLKNLFRAVQQLVKSGIVLSGHDISDGGLVTCL
VEMALAGQRGVTITMP.VASDYLPEMFAEHPGLVFEVEERSVGEVLQTLRSMNMYPAVLGRVGEQGPDQMFEVQHGPETV
LRQSLRLLLGTWSSFASEQYECLRPDRINRS.MHVSDYGYNEALAVSPLTGKNLSPRRLVTEPDPRC..QVAVLCAPGTR
GHESLLAAFTNAGCLCRRVFFREVRDNTF......LDKYVGLAIGGVHGARDSALAGRATVALINRFP...ALRDAILKF
LNRPDTFSVALGELGVQVLAGLGAVGSTDNPPAPGVEVNVQR.....SPLILAPNASGMFESRWLNISIPATTSSVMLRG
LRGCVLPCWVQGSCLGLQFTNLGMPYVLQNAHQIACHFHSNGTDAWRFAMNYPRNPTEQGNIAGLCSRDGRHLALLCDPS
LCTDFWQWEHIPPAFGHPTGCSPWTLMFQAAHLWSLR
>GP|2338035|gb|AAC58119.1/106-1315
RTTKIMYGPDLKRIPTNFSRDVM..DLLQQQGITSVMR.......VEVGRCLTFDNRHELYDIT....MDMVLKEIKSKE
SQIIYMEG..........FENFTVNTEPIHYASDIIQVTGTEDYVCDMIMKKIGPDVPFAQQV..........AYLPNVS
IPSTSVATALSFKLRAAMYFTKEMSSFHYAILQCQGNLGFISQQTDGLRMQRSILMENSPLASCLGAYVTNF....AFNC
RQDYKEMKKLY.TSLMVQAATNIRAGSPTVGGFVRLICNNGGLKVKLYRPMLYECHLASSIGSNLKTADFRPGN......
ILVALGQFYPSVLDDTH.P.FYYRDSAADYNKVVQALNGFYCTVTS..PCVTSSLRDLGKKTVKQHLFALLK.NGGANLY
ISCLPAALVYQLQRIPETEWLC.SLEHLLDVYFFNTYANILFLTVKNTS...EYTTLGQQFKPIEILQNVARLFKCDVHI
LGETVDKIGIHVINDLGNPYN.YTSRRHYGQHCYSMFKPPENPQDYTLPGASEEEEELECVVLTPGLDWAQGFVIEECIR
NTLLSPTVGSKAFVVQHIDRCGNGLVVQQPGVGRFDFPLADYSLVLH...............SLVKPPMGDTPDSLAMWK
SLSLEDLLNINNA..........EVHENIPAS..CMAVGEQPLKVAASPSNGALRAIAELLTNLMLGPKML.LSNLIVTA
SVTWESGQS.CEELKAMLRACRAFAEQLGVNFVVSSASSSVPQDSRHLNTGIPRPS.K..FFKNIVCSGTCKVT..SVKR
ALPVLQKAGNILVHVSIDPTEGLAGTVFENIYGLSLG..TVSEISAPKMAALFAIIQDGVQEGVIVSGHDVSDGGLVACV
AELCLSTEFVVRMTVP.EGLHALGYLFAESPGVVVEISPNQLPALRDKCSAAGLFCQDIAYITN.GDESFFSVVSNGKIV
FQQPLSSLRATWSTYSDGLLSALCSDLEEDE.RHKGDYGCNEVDFRGLKEGLMNNYVAFYYNPDIQN..KVAVLTWPGMT
KDESLFWAFTNAQFDTYMVCITEINSPSF......FNDFRGLAIGNGVGYTEPLVAAVGALTALIHTQGDSPALRALLHF
FNRADTFSLGCGEFGFFILSQFIYYLHEQSFLVGHQHEEFKLS.....PISLEKTKSGIYESRWLSVHIPETTGSIMLAP
CRGMVLPCWVQGTYLGLSYKTDGVESELYNENLVACSFHGKSSSSENFARHYPRNPSGNSSVAGICSDDGRHLATLIDPS
LSFFPFQWQHLPSG.YERMQTSPWSLLFYQMHMWCCS
>GP|2318000|gb|AAB66458.1/93-1307
RALALSYGPNTRWRPTTVSRELA..AYLHDLIPEYSIR.......IESFRRVICTLENTPTNISNTRLLESAYGFLEDHF
TANTVLSIMRPES....AIENYETFTHSMLVSAPAPPPDPLTMKITYPNTTPLDSVLNHCSLG..........T.YHREN
LYPTMLHETLSTKFPMFLG...QSADVQTAHWHTCSMFFNPGWVLENIYFASSWITGIDFQHSALGLYTLHP.....PED
QQPFHLVNKRSRAVLKKYSSLMRAMGLPICGGFSRPIRTT.HALESGQDVLINASVTGTVPQNRLSTQDPRPGD......
LIVFLGDFVPTLHQETAP..YLYTHSPLELNKILAVVKQLSDTTTQ..SCITKTIRPFGHPSMLEALTELIH.PYGAYLD
LNNLPQPIVSALNSSAPA.....IHEEIVKHHFLSVHCPVYLLVISQDLGLEDAAERDATHNPLDMFLTFAENHKLPCGV
IGTLVEDRGLHFCKELFDGG..FPVKIEFTAQEATVPRGRLP........RSRSFSRHKPMKFDQSFLWTTEH.FNESVE
AILKHPAVESKEYIVKHIDRLGQYTVGQQQGCGPLDLPVCDHSIMMCTALKTTPQP.LDASGPRPTFTTLRVHSDSALDL
INSPTCWLSNK............EYSKPEVFPCVVTGVGEQYYKMQVDPVRGAVYGLVEAILNMLTSNCVHGWRKMAITG
SISWSSDDPSYSLLYQTLMACKDFCYSLSIPITYTNATSGQTQDTGPRPGP.........TTNSIAFTAQCPGVMGTYRK
TTPDFKSHGSYIIWLPMSQKLTLAGTIFQQISKLKAN..KLHKLAPEYISNLAHALEMLTSRTAILSMHDVSDGGLIAAI
LEMAMAGNKGCNIEMPSYITRPFDMLISETPGMVIEVEKKSMEMVKAILKFKSLTYYKLGQVAKHGEEPVVEISHAGKQL
FKAHLSTVMRWWRHTYSSHITQQCSNLSAKEKLYVLDYGNNKTDLGLMGPGMRSRHLRPVKCVDPDFGAYVCVACSPGQP
PPHSLMSALSNSGFDPVPCNILELAHTDLN.......EYSGIIFSGHSGAEKNVTAASILANSLVTNQ...DFTETLTRF
YNKSHTFILGFGELGTQLLLALDIVNLDQSNPQFISRTEERE...LFQHGALEPNASALLECLWLNFYVRQ.SRSVFLAP
ISGSVVPAWAVGTHLGINFNHDGAEQRLMTSGQISATFHGPEPGRNLEAAHYPRNPSGASNVAAFCSPDGRATAMLIDPS
QSFFPWQWQYDAEN....LQCTPWQICFFRLLLWSLA
>GP|2318002|gb|AAB66460.1/96-1287
ELLDFAYSHLQSLPPATALQELINSAVVGTHPLRANIR.......IDLTHHLLVTLLHEGSTLAEVTHRVLSYLHSWNVE
GRSRQLVTLPLG......SDAETGLFPTSYRRPRPHPPDPVSSGIFLPRLGDRSSVCLGSTSP...........PLAYGT
GYPLFLRGLTEVDHALDDTN...RLHVRHTCLHLHARIQRPGHAVEPLLFLQAWLPGSRPVQSTLGLFILAP........
SQVTPLSSLQSTYAVQDQAGALYACGVGVPIGFIRHITHENHELGFVVVHTSTTSSFDRNCHETWVNASHPAGG......
DIVLVGSLEDSPLADMP..PHSNAQSPLIANGISQAIARLVGDLGP..GAIVKSIRPPYLSSLEELLLELLF.PLSATID
LSYLSQDLLDELLASTDDN.....YEETCRQVFFNKVCCVIPLLVSNTPCIDHNTG..EEVLPLDRLRQLCSSSGVTAVF
LGRARPGAAGILVSDIRGAPPERRADFYLQDAYPRQPYYPLG.........PEPSNRGRTIPHHVRFPWQTIN.FNSFME
FLLSHPDVESKEGIVRHLDRCGQGQVVQQQGCGPLDLPVSDYSTIYTG.............VYQSASKTIQVNTEIAQRL
ILDVDAWFDPHVP..........TVLTNNHCICITTALGEQCRKVHLDPRRGVMYALLESLTNLFCSPHIL.VDDIHITA
AVTCGPNLRHYELINYCLRCCRDFCGEAGVCFSTTSASDSTPERSPSTPP...........LMTIVFTAQATGPLYLAPK
PTPDFKSPGSHIIWVSLHPKFTLSASIAATILGLACT..NLLTFDHRLVWKTLKTINHFLTRGAILSIHDISDGGLITCL
LEMAMSGRRGAEIEIPAQVPCPYQFMLSETPGFICEVDPLRAQDITCELTSQGLCFAMIGFVSGNVPPATIRCMHNRNVI
YQESLAHATMYWRSGFLREHMMKVGNLTPQEQQESLSLGYNRPYNLPRPQSSKLCALSMAPGSSPPK...VLLIVFPGQP
THHGTLTAFASMGFDIRPMDVTELYKTDP.......LTVSGCVIAGQRGTLLSETGGWLTASALLQNL...QFLDWMNTF
YQQKHTFILGFGEFATQVLLALNLTEWRCDRPFIATELEELIN.....RPRLTANKVPLLQSLWLNVSLPP.SNSIFFRP
LHGSACPAWACGTHLGIDISSSSSGDTLSP.GLIAARFATADGTAP..ATYYPRNPSGGTNVAALCSYDGRACTMVFNPT
DSLYLHQWQHLDDQ...EAQESPWRQCLHHLLLWALA
>GP|2318001|gb|AAB66459.1/96-1271
QRLDFIYGPFPGQRPLTWCNELT..ELLGYILPMGTTR.......MDYSRRICGIYTQPNAAIL..VMIELLYWFIYGRE
RTQLEYDH..........LSTFEPSSRLTSPTVLSSEPDAVHANIMLAQGLGRTTYANSLST..................
.FPEAVPTMIKLTGSEMATCHHTTITGPGNFLHANLSSISN.............MPGVIPVAINGGSYLICN......QT
VGDNPLAPCILTMLLKARSDHLRASGVPVTGGFIRPISSNQLTFPTEVNFVNFISKLSKDDYVSHNRPADPCNT......
FIVAVGSFCPLYRPDGP..PYGYDSSPLTVRKLTRVLQEWTKDLSH..ACYIRSMMPQVRCSIQEILTELLS.PMGALID
INDLPDPVCHGLRNRTQE.....ELERGIRTKFLNVTTDQVFLLVQNETG..TIQETQESVGTIEHLINLCAKYEVACSI
VGKCCTEPNLHIISSTSNPVAVTYDTADIMLTIPLDYDHGQTG........GLAASAPRPSREDGALNWASLN.LRQVWS
DIITHPAVESKEYILTHIRRVANGRVVQQPGCGPFDFPVADHSLVSLNSIHN........TKSWTSDLTVVTSSEMVNRI
MSDPDIWFCDP............STSDVPRLECVASAIGEQHYKVKEDPILGSTYGLVEALLNLNTCPGAT.LEKTIITC
SVTCSQADVAHSELYDAIAECKNMCTMMGCTFMCDMAAKNPRNCDINSP..............LIVFSAKCIVDFPWRGR
IGPNLKEHHNTLLWLPIHSQPTLAGSIFKTFNPHVP.IHRLPQISVNALFKLLTNTQKLFEQDKIRSIHDVSDGGLLTCV
AEMAMSGGKSVVMTLPDHIANPKAMLLSETPGYVIEVDNDSTDAILTFLQENSCVAMPIGRVVPLTESSTFSVFHKSENL
LSVPFFNVVGCWRRRHVDESTLLCTHLGPRRSIYAIEYGHNQFNFPGVSRYFLTSPVRSFRAPPHAQK.RVCVIEFNGQT
SLEGTLFMLQYAGFLPEIVHSSCLHDFETS.....LDRFCGIVFTGSMCTLHEHGGVLAAATRFTESH...TVVSKLSAF
CRRPDTFMLGFDQLGMQILLNLNILNITADKTMYDCKIDPLECMP......LKKNASCTYESRWLNFYIPE.SNSLFFKP
IQQNVFPSWIQGSNLGLPLD.QHQESFWRNTRQICTYYQTEQPTPGIAAINYPRNPVAGSPVAGICSLDGRITGCLIDPA
ESFFPWTWQFVPGN..RALASTPWQLCFQQLLIWTLS
>SP|Q01000|VP03_HSVSA/78-1226
QTLSFSYGPHLQGSQTTFSKDLV..DVVKNLSMFTPQGPENAFTVERIEYYRTIHIICDLKDPK.KRHIRHLQKMLCNPY
TGLTNFVIPQDKR.LEMDVLDAESAVSAPLSDPLWTMSNGLFNLLGYSSQYSVFKRGAAPKVF..........VEKNSRL
AISMNIDYWNPWSSTNMLYDGLHAIEKGLIYSFGSFTPTPS...LTSVFNMAQHWYVPMFSACQIGHVMQLP....LQTH
ELSLTGSLPMK..MLQAHLNLLKCSSMPHIQGFFRLVPKD.LSHILPQTKIYNGFISTSLCLQTINMANEHPLQ......
DKTYLYQLGNFFTYHKQ.F.LTCQESGKEIGSILTALAFFLDSVKTYPGTIVGMSTSLPVASMKAKLAAVCQQVCGARLL
VSALPPQVVAKLAPFSPSNRV..ENKKMLKQYFFNLLTSDLIIAIKN...........VNIDAQAALKTACYMAGCRFKK
IGLLTHLKGTEVVDNTVER...PYPILRFDRFKPKFPLLSS...............PTSITFLEERINWQDLN.LRDTIL
KILEHPSVGCKEFIVNHTDKLISGRVARTSIVGPWQLPVSDYSILVP...............MHPCTTEEVR..ENPWDY
ETDIDSH................CVFEEAAVAGICSAIGESTILTQADLKVGTIRAITEAILNLSMVPWNN.IGNIVIQL
SITLPYTAHVSTYLQLVMETAKTFCEALRVSCTFTANATEGG....................ASIVASAIVNTLD.VSKC
ITPDLKFNNSFLFLLTTEKDYSLFGSVAQQILEKTFIGEIPSATSPVMLKKMLSVLQTLIKDESVVSGHDVSDGGLVATV
AEMALSGGKGVRVYVP.HGEDAIKFLCSETPGVVIEVQGSKMYYVQQFLHSENINFQIIG...ESTSSLTFSISQNLTKL
VHEPLELFKSAWRSFS....DACEPCQIH........PRPYRMQIATVPKYCPVGPCRFHT.........VIVYLLPNNS
VPHGLLNAIEEAGFQPRLVSIHQPSKTTNVYD...PHTVWGFFIVGASNVQDEDVGMRALIAQLKSHV...AFQRDLRTM
LAKPDVFSVAIGALACELLFYNKAIGYNKPSD..TYMTCVK.............NSSRKFESRWSNIYIPESTKAIAFQS
LKNSLIPCWTQGTHLKFYHP.KPMLEKMEESGMVSSMFYGHSLSSG.PAQNYPLTPNGENAIAGVCSADGRHLALLHDPS
LCNNLWQWPYVPLEN.PPLKVSPWKTMFLDLHKWGIT
>GP|20453798|gb|AAM22110.1/95-1330
NTFYFMYGPNVHDVPTTLSDDLK..NLVSTSLFSNPSK...YFSIDRIEKVRILILNGELNRLA.PFHVELIQNILCNKV
TEVQPLDLEKYEPREVYRFDNFTGSVGPDEIQLWFEGDGNRAQGIKQDVIHTSDLFQVIGFNDTGRMFLGFKCDEADHWF
ISAIAEDGGIRPDSTGVMGSERETYESSTGLAFVNANIDHGHNQLSVLRNLTNKLPTALPIAAHVGILYHTPPQFQNLDG
EYTVQVEDMMVQKFIECHTSAFTSAGVPTCLGFTRFSSIFKEDVPISYTGTVCTGPADRFEFVSITQDTLKVVEKSGDSL
KVFQLGAFDYKLMSKGDGL.LQHMDSGRDVVILLSMLYNLTREFDT.TQIYGIFGNKNWNCLNIDKLSQACGDKCGIEIE
HSNLPLETQRALKRWSPRNME..HNHKVIESSWLHIVSRAVYITIRDS..........SDQVTSRRLKMMCRAFGCPVLF
LGKLTNSVNDIIVSGMFHDVP.TNITFRKTMLTKGSDERFN............PVRWEAPRGIGASSAIGYKGDAKSLLL
TILQHPTVGCKKHLVYHMDRCGNGRIAQQQGVGPFDIPISDYCVQILNLVPPVEQSTYWTELHDHLYDIFDDYNENAMDG
GISRNVFQYSWEYGLTIQVPDDNKIYYEPNLWAVCSALGEQNVITQIDAKAGVAWSITEALLNLSLSPMDT.LEHVIVTM
TFGWPLVRNVKADLKDAISFAKDFCAKLGVSFEVDTCKQVKNTGKGSAG............SRCIMACASSPCML.PARK
ITPALSTKGSHLLHISLTNSITSTGSIYTEITDKSFG.VESLVLSPQSLRKILLFLIELKKEGVIISGHDISDGGMFACI
AEMVIAGAKQVKITLP.SDTKVEEFLCSQTPGIIIEVLPEHSKTVVSQAETIGVLCKVIGSVIS.GRSPGLDIVHGSTSL
MKFSLKQLQTNWEFYSNKQNLLFRNEGEE.........NLDDSVYGNYEMVLPMDVFYISALPDERH..QVTVYLLPGCN
RPDALLAALTGSGFNPRIISTTGQKTLDMPHDTLSDPTTVGVIIYGTPNTLDIESGMNAMSQFVLRNK...HIHRDLYNI
VKKRGRFSLAIGPMACKLLFDSRIISYKHGEG..SVPKLVQ.............NASGRYESRWLNFHIPRDTKAVALHD
LKGCVLPCWAQGTHLGFGHVDPKVFEEMEERGQIASLFHGQRVQDG.PATRYPLNPSEGYSYAGLCSEDGRHLAILYDPC
LAFHASQWQYVNIKN.VDTFVSPWKMMFYRLRLWSVA